data_7GAH # _model_server_result.job_id xVmSWhza2V9So83d61P4Xg _model_server_result.datetime_utc '2024-11-24 23:24:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gah # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":209}' # _entry.id 7GAH # _exptl.entry_id 7GAH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GAH _cell.length_a 61.2 _cell.length_b 61.2 _cell.length_c 35.27 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GAH _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 7GAH _atom_sites.fract_transf_matrix[1][1] 0.01634 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028353 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LRF A 1 201 201 LRF LIG . C 3 EDO A 1 202 105 EDO EDO . D 3 EDO A 1 203 106 EDO EDO . E 3 EDO A 1 204 107 EDO EDO . F 3 EDO A 1 205 108 EDO EDO . G 3 EDO A 1 206 109 EDO EDO . H 3 EDO A 1 207 110 EDO EDO . I 3 EDO A 1 208 111 EDO EDO . J 3 EDO A 1 209 112 EDO EDO . K 3 EDO A 1 210 113 EDO EDO . L 4 CL A 1 211 114 CL CL . M 5 HOH A 1 301 40 HOH HOH . M 5 HOH A 2 302 56 HOH HOH . M 5 HOH A 3 303 86 HOH HOH . M 5 HOH A 4 304 43 HOH HOH . M 5 HOH A 5 305 22 HOH HOH . M 5 HOH A 6 306 55 HOH HOH . M 5 HOH A 7 307 51 HOH HOH . M 5 HOH A 8 308 10 HOH HOH . M 5 HOH A 9 309 33 HOH HOH . M 5 HOH A 10 310 21 HOH HOH . M 5 HOH A 11 311 52 HOH HOH . M 5 HOH A 12 312 42 HOH HOH . M 5 HOH A 13 313 57 HOH HOH . M 5 HOH A 14 314 82 HOH HOH . M 5 HOH A 15 315 62 HOH HOH . M 5 HOH A 16 316 48 HOH HOH . M 5 HOH A 17 317 8 HOH HOH . M 5 HOH A 18 318 91 HOH HOH . M 5 HOH A 19 319 49 HOH HOH . M 5 HOH A 20 320 59 HOH HOH . M 5 HOH A 21 321 19 HOH HOH . M 5 HOH A 22 322 9 HOH HOH . M 5 HOH A 23 323 34 HOH HOH . M 5 HOH A 24 324 38 HOH HOH . M 5 HOH A 25 325 41 HOH HOH . M 5 HOH A 26 326 27 HOH HOH . M 5 HOH A 27 327 20 HOH HOH . M 5 HOH A 28 328 45 HOH HOH . M 5 HOH A 29 329 4 HOH HOH . M 5 HOH A 30 330 2 HOH HOH . M 5 HOH A 31 331 12 HOH HOH . M 5 HOH A 32 332 17 HOH HOH . M 5 HOH A 33 333 16 HOH HOH . M 5 HOH A 34 334 23 HOH HOH . M 5 HOH A 35 335 93 HOH HOH . M 5 HOH A 36 336 25 HOH HOH . M 5 HOH A 37 337 7 HOH HOH . M 5 HOH A 38 338 83 HOH HOH . M 5 HOH A 39 339 18 HOH HOH . M 5 HOH A 40 340 77 HOH HOH . M 5 HOH A 41 341 63 HOH HOH . M 5 HOH A 42 342 69 HOH HOH . M 5 HOH A 43 343 71 HOH HOH . M 5 HOH A 44 344 53 HOH HOH . M 5 HOH A 45 345 84 HOH HOH . M 5 HOH A 46 346 15 HOH HOH . M 5 HOH A 47 347 35 HOH HOH . M 5 HOH A 48 348 1 HOH HOH . M 5 HOH A 49 349 31 HOH HOH . M 5 HOH A 50 350 64 HOH HOH . M 5 HOH A 51 351 92 HOH HOH . M 5 HOH A 52 352 81 HOH HOH . M 5 HOH A 53 353 13 HOH HOH . M 5 HOH A 54 354 89 HOH HOH . M 5 HOH A 55 355 14 HOH HOH . M 5 HOH A 56 356 5 HOH HOH . M 5 HOH A 57 357 6 HOH HOH . M 5 HOH A 58 358 11 HOH HOH . M 5 HOH A 59 359 66 HOH HOH . M 5 HOH A 60 360 32 HOH HOH . M 5 HOH A 61 361 44 HOH HOH . M 5 HOH A 62 362 3 HOH HOH . M 5 HOH A 63 363 75 HOH HOH . M 5 HOH A 64 364 60 HOH HOH . M 5 HOH A 65 365 72 HOH HOH . M 5 HOH A 66 366 47 HOH HOH . M 5 HOH A 67 367 46 HOH HOH . M 5 HOH A 68 368 24 HOH HOH . M 5 HOH A 69 369 79 HOH HOH . M 5 HOH A 70 370 30 HOH HOH . M 5 HOH A 71 371 36 HOH HOH . M 5 HOH A 72 372 37 HOH HOH . M 5 HOH A 73 373 61 HOH HOH . M 5 HOH A 74 374 68 HOH HOH . M 5 HOH A 75 375 67 HOH HOH . M 5 HOH A 76 376 78 HOH HOH . M 5 HOH A 77 377 80 HOH HOH . M 5 HOH A 78 378 76 HOH HOH . M 5 HOH A 79 379 90 HOH HOH . M 5 HOH A 80 380 26 HOH HOH . M 5 HOH A 81 381 65 HOH HOH . M 5 HOH A 82 382 94 HOH HOH . M 5 HOH A 83 383 85 HOH HOH . M 5 HOH A 84 384 28 HOH HOH . M 5 HOH A 85 385 88 HOH HOH . M 5 HOH A 86 386 70 HOH HOH . M 5 HOH A 87 387 29 HOH HOH . M 5 HOH A 88 388 50 HOH HOH . M 5 HOH A 89 389 39 HOH HOH . M 5 HOH A 90 390 58 HOH HOH . M 5 HOH A 91 391 87 HOH HOH . M 5 HOH A 92 392 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 3 -2.039 -25.223 0.167 1 103.33 ? C1 EDO 209 A 1 HETATM 2 O O1 EDO . . . J 3 -2.26 -24.11 -0.683 1 97.5 ? O1 EDO 209 A 1 HETATM 3 C C2 EDO . . . J 3 -1.96 -24.862 1.611 1 100.41 ? C2 EDO 209 A 1 HETATM 4 O O2 EDO . . . J 3 -2.821 -25.621 2.448 1 83.23 ? O2 EDO 209 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 894 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #