data_7GAR
#
_model_server_result.job_id            SkG0WfrSd4LNo-5NxdweeQ 
_model_server_result.datetime_utc      '2024-11-07 06:27:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7gar 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    7GAR 
#
_exptl.entry_id    7GAR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7GAR 
_cell.length_a            61.026 
_cell.length_b            61.026 
_cell.length_c            35.286 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7GAR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 97 n n 
C1 C2 EDO sing 98 n n 
C1 H11 EDO sing 99 n n 
C1 H12 EDO sing 100 n n 
O1 HO1 EDO sing 101 n n 
C2 O2 EDO sing 102 n n 
C2 H21 EDO sing 103 n n 
C2 H22 EDO sing 104 n n 
O2 HO2 EDO sing 105 n n 
#
_atom_sites.entry_id                     7GAR 
_atom_sites.fract_transf_matrix[1][1]    0.016386 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016386 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02834 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 2NU A 1 201 201 2NU LIG . 
C 3 EDO A 1 202 105 EDO EDO . 
D 3 EDO A 1 203 107 EDO EDO . 
E 3 EDO A 1 204 108 EDO EDO . 
F 3 EDO A 1 205 109 EDO EDO . 
G 3 EDO A 1 206 110 EDO EDO . 
H 3 EDO A 1 207 111 EDO EDO . 
I 3 EDO A 1 208 112 EDO EDO . 
J 3 EDO A 1 209 113 EDO EDO . 
K 4 CL A 1 210 114 CL CL . 
L 5 HOH A 1 301 56 HOH HOH . 
L 5 HOH A 2 302 91 HOH HOH . 
L 5 HOH A 3 303 21 HOH HOH . 
L 5 HOH A 4 304 10 HOH HOH . 
L 5 HOH A 5 305 86 HOH HOH . 
L 5 HOH A 6 306 27 HOH HOH . 
L 5 HOH A 7 307 75 HOH HOH . 
L 5 HOH A 8 308 33 HOH HOH . 
L 5 HOH A 9 309 19 HOH HOH . 
L 5 HOH A 10 310 34 HOH HOH . 
L 5 HOH A 11 311 40 HOH HOH . 
L 5 HOH A 12 312 82 HOH HOH . 
L 5 HOH A 13 313 17 HOH HOH . 
L 5 HOH A 14 314 84 HOH HOH . 
L 5 HOH A 15 315 47 HOH HOH . 
L 5 HOH A 16 316 62 HOH HOH . 
L 5 HOH A 17 317 32 HOH HOH . 
L 5 HOH A 18 318 41 HOH HOH . 
L 5 HOH A 19 319 42 HOH HOH . 
L 5 HOH A 20 320 51 HOH HOH . 
L 5 HOH A 21 321 18 HOH HOH . 
L 5 HOH A 22 322 92 HOH HOH . 
L 5 HOH A 23 323 48 HOH HOH . 
L 5 HOH A 24 324 66 HOH HOH . 
L 5 HOH A 25 325 64 HOH HOH . 
L 5 HOH A 26 326 12 HOH HOH . 
L 5 HOH A 27 327 8 HOH HOH . 
L 5 HOH A 28 328 16 HOH HOH . 
L 5 HOH A 29 329 45 HOH HOH . 
L 5 HOH A 30 330 13 HOH HOH . 
L 5 HOH A 31 331 9 HOH HOH . 
L 5 HOH A 32 332 59 HOH HOH . 
L 5 HOH A 33 333 25 HOH HOH . 
L 5 HOH A 34 334 7 HOH HOH . 
L 5 HOH A 35 335 1 HOH HOH . 
L 5 HOH A 36 336 52 HOH HOH . 
L 5 HOH A 37 337 89 HOH HOH . 
L 5 HOH A 38 338 55 HOH HOH . 
L 5 HOH A 39 339 2 HOH HOH . 
L 5 HOH A 40 340 20 HOH HOH . 
L 5 HOH A 41 341 23 HOH HOH . 
L 5 HOH A 42 342 49 HOH HOH . 
L 5 HOH A 43 343 43 HOH HOH . 
L 5 HOH A 44 344 77 HOH HOH . 
L 5 HOH A 45 345 6 HOH HOH . 
L 5 HOH A 46 346 4 HOH HOH . 
L 5 HOH A 47 347 3 HOH HOH . 
L 5 HOH A 48 348 54 HOH HOH . 
L 5 HOH A 49 349 53 HOH HOH . 
L 5 HOH A 50 350 72 HOH HOH . 
L 5 HOH A 51 351 73 HOH HOH . 
L 5 HOH A 52 352 71 HOH HOH . 
L 5 HOH A 53 353 83 HOH HOH . 
L 5 HOH A 54 354 69 HOH HOH . 
L 5 HOH A 55 355 15 HOH HOH . 
L 5 HOH A 56 356 24 HOH HOH . 
L 5 HOH A 57 357 14 HOH HOH . 
L 5 HOH A 58 358 80 HOH HOH . 
L 5 HOH A 59 359 44 HOH HOH . 
L 5 HOH A 60 360 35 HOH HOH . 
L 5 HOH A 61 361 68 HOH HOH . 
L 5 HOH A 62 362 60 HOH HOH . 
L 5 HOH A 63 363 36 HOH HOH . 
L 5 HOH A 64 364 74 HOH HOH . 
L 5 HOH A 65 365 11 HOH HOH . 
L 5 HOH A 66 366 31 HOH HOH . 
L 5 HOH A 67 367 79 HOH HOH . 
L 5 HOH A 68 368 63 HOH HOH . 
L 5 HOH A 69 369 67 HOH HOH . 
L 5 HOH A 70 370 5 HOH HOH . 
L 5 HOH A 71 371 87 HOH HOH . 
L 5 HOH A 72 372 81 HOH HOH . 
L 5 HOH A 73 373 28 HOH HOH . 
L 5 HOH A 74 374 90 HOH HOH . 
L 5 HOH A 75 375 46 HOH HOH . 
L 5 HOH A 76 376 78 HOH HOH . 
L 5 HOH A 77 377 50 HOH HOH . 
L 5 HOH A 78 378 57 HOH HOH . 
L 5 HOH A 79 379 37 HOH HOH . 
L 5 HOH A 80 380 85 HOH HOH . 
L 5 HOH A 81 381 93 HOH HOH . 
L 5 HOH A 82 382 30 HOH HOH . 
L 5 HOH A 83 383 76 HOH HOH . 
L 5 HOH A 84 384 26 HOH HOH . 
L 5 HOH A 85 385 61 HOH HOH . 
L 5 HOH A 86 386 29 HOH HOH . 
L 5 HOH A 87 387 39 HOH HOH . 
L 5 HOH A 88 388 65 HOH HOH . 
L 5 HOH A 89 389 88 HOH HOH . 
L 5 HOH A 90 390 94 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 3 21.573 -15.373 14.01 1 99.27 ? C1 EDO 204 A 1 
HETATM 2 O O1 EDO . . . E 3 22.02 -16.299 14.978 1 99.52 ? O1 EDO 204 A 1 
HETATM 3 C C2 EDO . . . E 3 21.102 -16.023 12.761 1 95.15 ? C2 EDO 204 A 1 
HETATM 4 O O2 EDO . . . E 3 19.707 -16.262 12.742 1 99.4 ? O2 EDO 204 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           210 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#