data_7GBL # _model_server_result.job_id iQSYNi8whKhTHx9NjCG5tA _model_server_result.datetime_utc '2024-11-21 09:17:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 7GBL # _exptl.entry_id 7GBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 297.309 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-{[(2S)-4-oxoazetidin-2-yl]oxy}phenyl)-2-(pyridin-3-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.29 _cell.angle_gamma 90 _cell.entry_id 7GBL _cell.length_a 113.505 _cell.length_b 53.048 _cell.length_c 45.128 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H15 N3 O3' _chem_comp.formula_weight 297.309 _chem_comp.id KWR _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-{[(2S)-4-oxoazetidin-2-yl]oxy}phenyl)-2-(pyridin-3-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C5 KWR doub 182 n y N C6 KWR sing 183 n y C5 C4 KWR sing 184 n y C6 C2 KWR doub 185 n y C4 C3 KWR doub 186 n y C2 C3 KWR sing 187 n y C2 C1 KWR sing 188 n n C1 C KWR sing 189 n n O C KWR doub 190 n n C N1 KWR sing 191 n n O2 C14 KWR doub 192 n n N2 C14 KWR sing 193 n n N2 C12 KWR sing 194 n n N1 C7 KWR sing 195 n n C8 C7 KWR doub 196 n y C8 C9 KWR sing 197 n y C14 C13 KWR sing 198 n n C7 C15 KWR sing 199 n y C9 C10 KWR doub 200 n y C15 C11 KWR doub 201 n y C10 C11 KWR sing 202 n y C12 C13 KWR sing 203 n n C12 O1 KWR sing 204 n n C11 O1 KWR sing 205 n n N1 H1 KWR sing 206 n n C4 H2 KWR sing 207 n n C5 H3 KWR sing 208 n n C6 H4 KWR sing 209 n n C8 H5 KWR sing 210 n n C10 H6 KWR sing 211 n n C13 H7 KWR sing 212 n n C13 H8 KWR sing 213 n n C15 H9 KWR sing 214 n n N2 H10 KWR sing 215 n n C1 H11 KWR sing 216 n n C1 H12 KWR sing 217 n n C9 H13 KWR sing 218 n n C12 H14 KWR sing 219 n n C3 H15 KWR sing 220 n n # _atom_sites.entry_id 7GBL _atom_sites.fract_transf_matrix[1][1] 0.00881 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001919 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018851 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 2 DMS A 1 404 1006 DMS DMS . F 3 KWR A 1 405 4000 KWR LIG . G 4 HOH A 1 501 9 HOH HOH . G 4 HOH A 2 502 60 HOH HOH . G 4 HOH A 3 503 102 HOH HOH . G 4 HOH A 4 504 169 HOH HOH . G 4 HOH A 5 505 86 HOH HOH . G 4 HOH A 6 506 111 HOH HOH . G 4 HOH A 7 507 69 HOH HOH . G 4 HOH A 8 508 79 HOH HOH . G 4 HOH A 9 509 32 HOH HOH . G 4 HOH A 10 510 52 HOH HOH . G 4 HOH A 11 511 66 HOH HOH . G 4 HOH A 12 512 28 HOH HOH . G 4 HOH A 13 513 70 HOH HOH . G 4 HOH A 14 514 118 HOH HOH . G 4 HOH A 15 515 37 HOH HOH . G 4 HOH A 16 516 4 HOH HOH . G 4 HOH A 17 517 10 HOH HOH . G 4 HOH A 18 518 142 HOH HOH . G 4 HOH A 19 519 1 HOH HOH . G 4 HOH A 20 520 163 HOH HOH . G 4 HOH A 21 521 90 HOH HOH . G 4 HOH A 22 522 44 HOH HOH . G 4 HOH A 23 523 34 HOH HOH . G 4 HOH A 24 524 167 HOH HOH . G 4 HOH A 25 525 113 HOH HOH . G 4 HOH A 26 526 92 HOH HOH . G 4 HOH A 27 527 33 HOH HOH . G 4 HOH A 28 528 77 HOH HOH . G 4 HOH A 29 529 85 HOH HOH . G 4 HOH A 30 530 25 HOH HOH . G 4 HOH A 31 531 12 HOH HOH . G 4 HOH A 32 532 29 HOH HOH . G 4 HOH A 33 533 181 HOH HOH . G 4 HOH A 34 534 126 HOH HOH . G 4 HOH A 35 535 180 HOH HOH . G 4 HOH A 36 536 27 HOH HOH . G 4 HOH A 37 537 53 HOH HOH . G 4 HOH A 38 538 6 HOH HOH . G 4 HOH A 39 539 36 HOH HOH . G 4 HOH A 40 540 64 HOH HOH . G 4 HOH A 41 541 56 HOH HOH . G 4 HOH A 42 542 55 HOH HOH . G 4 HOH A 43 543 38 HOH HOH . G 4 HOH A 44 544 71 HOH HOH . G 4 HOH A 45 545 54 HOH HOH . G 4 HOH A 46 546 20 HOH HOH . G 4 HOH A 47 547 51 HOH HOH . G 4 HOH A 48 548 11 HOH HOH . G 4 HOH A 49 549 124 HOH HOH . G 4 HOH A 50 550 30 HOH HOH . G 4 HOH A 51 551 170 HOH HOH . G 4 HOH A 52 552 5 HOH HOH . G 4 HOH A 53 553 15 HOH HOH . G 4 HOH A 54 554 168 HOH HOH . G 4 HOH A 55 555 97 HOH HOH . G 4 HOH A 56 556 191 HOH HOH . G 4 HOH A 57 557 187 HOH HOH . G 4 HOH A 58 558 166 HOH HOH . G 4 HOH A 59 559 132 HOH HOH . G 4 HOH A 60 560 138 HOH HOH . G 4 HOH A 61 561 65 HOH HOH . G 4 HOH A 62 562 19 HOH HOH . G 4 HOH A 63 563 46 HOH HOH . G 4 HOH A 64 564 100 HOH HOH . G 4 HOH A 65 565 3 HOH HOH . G 4 HOH A 66 566 193 HOH HOH . G 4 HOH A 67 567 176 HOH HOH . G 4 HOH A 68 568 24 HOH HOH . G 4 HOH A 69 569 182 HOH HOH . G 4 HOH A 70 570 13 HOH HOH . G 4 HOH A 71 571 161 HOH HOH . G 4 HOH A 72 572 119 HOH HOH . G 4 HOH A 73 573 183 HOH HOH . G 4 HOH A 74 574 41 HOH HOH . G 4 HOH A 75 575 50 HOH HOH . G 4 HOH A 76 576 78 HOH HOH . G 4 HOH A 77 577 114 HOH HOH . G 4 HOH A 78 578 59 HOH HOH . G 4 HOH A 79 579 74 HOH HOH . G 4 HOH A 80 580 14 HOH HOH . G 4 HOH A 81 581 108 HOH HOH . G 4 HOH A 82 582 122 HOH HOH . G 4 HOH A 83 583 179 HOH HOH . G 4 HOH A 84 584 7 HOH HOH . G 4 HOH A 85 585 139 HOH HOH . G 4 HOH A 86 586 98 HOH HOH . G 4 HOH A 87 587 21 HOH HOH . G 4 HOH A 88 588 49 HOH HOH . G 4 HOH A 89 589 134 HOH HOH . G 4 HOH A 90 590 80 HOH HOH . G 4 HOH A 91 591 120 HOH HOH . G 4 HOH A 92 592 40 HOH HOH . G 4 HOH A 93 593 31 HOH HOH . G 4 HOH A 94 594 83 HOH HOH . G 4 HOH A 95 595 17 HOH HOH . G 4 HOH A 96 596 121 HOH HOH . G 4 HOH A 97 597 73 HOH HOH . G 4 HOH A 98 598 185 HOH HOH . G 4 HOH A 99 599 63 HOH HOH . G 4 HOH A 100 600 72 HOH HOH . G 4 HOH A 101 601 26 HOH HOH . G 4 HOH A 102 602 153 HOH HOH . G 4 HOH A 103 603 144 HOH HOH . G 4 HOH A 104 604 67 HOH HOH . G 4 HOH A 105 605 45 HOH HOH . G 4 HOH A 106 606 110 HOH HOH . G 4 HOH A 107 607 104 HOH HOH . G 4 HOH A 108 608 127 HOH HOH . G 4 HOH A 109 609 109 HOH HOH . G 4 HOH A 110 610 88 HOH HOH . G 4 HOH A 111 611 8 HOH HOH . G 4 HOH A 112 612 196 HOH HOH . G 4 HOH A 113 613 99 HOH HOH . G 4 HOH A 114 614 62 HOH HOH . G 4 HOH A 115 615 2 HOH HOH . G 4 HOH A 116 616 188 HOH HOH . G 4 HOH A 117 617 106 HOH HOH . G 4 HOH A 118 618 195 HOH HOH . G 4 HOH A 119 619 81 HOH HOH . G 4 HOH A 120 620 23 HOH HOH . G 4 HOH A 121 621 199 HOH HOH . G 4 HOH A 122 622 18 HOH HOH . G 4 HOH A 123 623 68 HOH HOH . G 4 HOH A 124 624 116 HOH HOH . G 4 HOH A 125 625 57 HOH HOH . G 4 HOH A 126 626 112 HOH HOH . G 4 HOH A 127 627 197 HOH HOH . G 4 HOH A 128 628 101 HOH HOH . G 4 HOH A 129 629 178 HOH HOH . G 4 HOH A 130 630 151 HOH HOH . G 4 HOH A 131 631 125 HOH HOH . G 4 HOH A 132 632 47 HOH HOH . G 4 HOH A 133 633 156 HOH HOH . G 4 HOH A 134 634 129 HOH HOH . G 4 HOH A 135 635 194 HOH HOH . G 4 HOH A 136 636 103 HOH HOH . G 4 HOH A 137 637 137 HOH HOH . G 4 HOH A 138 638 95 HOH HOH . G 4 HOH A 139 639 91 HOH HOH . G 4 HOH A 140 640 94 HOH HOH . G 4 HOH A 141 641 174 HOH HOH . G 4 HOH A 142 642 117 HOH HOH . G 4 HOH A 143 643 143 HOH HOH . G 4 HOH A 144 644 200 HOH HOH . G 4 HOH A 145 645 173 HOH HOH . G 4 HOH A 146 646 48 HOH HOH . G 4 HOH A 147 647 162 HOH HOH . G 4 HOH A 148 648 96 HOH HOH . G 4 HOH A 149 649 171 HOH HOH . G 4 HOH A 150 650 165 HOH HOH . G 4 HOH A 151 651 186 HOH HOH . G 4 HOH A 152 652 84 HOH HOH . G 4 HOH A 153 653 184 HOH HOH . G 4 HOH A 154 654 16 HOH HOH . G 4 HOH A 155 655 177 HOH HOH . G 4 HOH A 156 656 89 HOH HOH . G 4 HOH A 157 657 123 HOH HOH . G 4 HOH A 158 658 61 HOH HOH . G 4 HOH A 159 659 164 HOH HOH . G 4 HOH A 160 660 115 HOH HOH . G 4 HOH A 161 661 145 HOH HOH . G 4 HOH A 162 662 76 HOH HOH . G 4 HOH A 163 663 130 HOH HOH . G 4 HOH A 164 664 150 HOH HOH . G 4 HOH A 165 665 136 HOH HOH . G 4 HOH A 166 666 22 HOH HOH . G 4 HOH A 167 667 152 HOH HOH . G 4 HOH A 168 668 159 HOH HOH . G 4 HOH A 169 669 154 HOH HOH . G 4 HOH A 170 670 157 HOH HOH . G 4 HOH A 171 671 192 HOH HOH . G 4 HOH A 172 672 189 HOH HOH . G 4 HOH A 173 673 39 HOH HOH . G 4 HOH A 174 674 155 HOH HOH . G 4 HOH A 175 675 43 HOH HOH . G 4 HOH A 176 676 107 HOH HOH . G 4 HOH A 177 677 135 HOH HOH . G 4 HOH A 178 678 75 HOH HOH . G 4 HOH A 179 679 141 HOH HOH . G 4 HOH A 180 680 172 HOH HOH . G 4 HOH A 181 681 58 HOH HOH . G 4 HOH A 182 682 131 HOH HOH . G 4 HOH A 183 683 147 HOH HOH . G 4 HOH A 184 684 93 HOH HOH . G 4 HOH A 185 685 190 HOH HOH . G 4 HOH A 186 686 198 HOH HOH . G 4 HOH A 187 687 140 HOH HOH . G 4 HOH A 188 688 128 HOH HOH . G 4 HOH A 189 689 133 HOH HOH . G 4 HOH A 190 690 42 HOH HOH . G 4 HOH A 191 691 87 HOH HOH . G 4 HOH A 192 692 158 HOH HOH . G 4 HOH A 193 693 149 HOH HOH . G 4 HOH A 194 694 35 HOH HOH . G 4 HOH A 195 695 146 HOH HOH . G 4 HOH A 196 696 105 HOH HOH . G 4 HOH A 197 697 160 HOH HOH . G 4 HOH A 198 698 148 HOH HOH . G 4 HOH A 199 699 82 HOH HOH . G 4 HOH A 200 700 175 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 KWR . . . F 3 9.874 -0.608 21.785 1 49.56 ? N1 KWR 405 A 1 HETATM 2 C C4 KWR . . . F 3 5.142 1.69 19.003 1 47.28 ? C4 KWR 405 A 1 HETATM 3 C C5 KWR . . . F 3 5.613 1.553 17.71 1 47.4 ? C5 KWR 405 A 1 HETATM 4 C C6 KWR . . . F 3 7.308 0.168 18.389 1 47.42 ? C6 KWR 405 A 1 HETATM 5 C C7 KWR . . . F 3 11.2 -0.305 22.165 1 50.54 ? C7 KWR 405 A 1 HETATM 6 C C8 KWR . . . F 3 12.222 -1.22 21.947 1 51.08 ? C8 KWR 405 A 1 HETATM 7 C C10 KWR . . . F 3 13.835 0.392 22.72 1 52.13 ? C10 KWR 405 A 1 HETATM 8 C C13 KWR . . . F 3 12.904 4.929 23.452 1 55.2 ? C13 KWR 405 A 1 HETATM 9 C C15 KWR . . . F 3 11.489 0.951 22.686 1 51.37 ? C15 KWR 405 A 1 HETATM 10 N N KWR . . . F 3 6.683 0.806 17.39 1 47.43 ? N KWR 405 A 1 HETATM 11 N N2 KWR . . . F 3 13.452 4.084 21.637 1 55.42 ? N2 KWR 405 A 1 HETATM 12 C C1 KWR . . . F 3 7.684 -0.495 20.792 1 48.48 ? C1 KWR 405 A 1 HETATM 13 C C11 KWR . . . F 3 12.806 1.291 22.955 1 52.36 ? C11 KWR 405 A 1 HETATM 14 O O1 KWR . . . F 3 13.093 2.533 23.483 1 53.35 ? O1 KWR 405 A 1 HETATM 15 C C2 KWR . . . F 3 6.916 0.237 19.716 1 47.97 ? C2 KWR 405 A 1 HETATM 16 C C9 KWR . . . F 3 13.535 -0.865 22.215 1 51.68 ? C9 KWR 405 A 1 HETATM 17 C C12 KWR . . . F 3 12.548 3.629 22.724 1 54.55 ? C12 KWR 405 A 1 HETATM 18 C C14 KWR . . . F 3 13.531 5.337 22.128 1 55.62 ? C14 KWR 405 A 1 HETATM 19 C C KWR . . . F 3 8.983 0.195 21.162 1 48.62 ? C KWR 405 A 1 HETATM 20 O O KWR . . . F 3 9.188 1.379 20.898 1 47.98 ? O KWR 405 A 1 HETATM 21 O O2 KWR . . . F 3 13.926 6.392 21.628 1 55.89 ? O2 KWR 405 A 1 HETATM 22 C C3 KWR . . . F 3 5.806 1.018 20.014 1 47.61 ? C3 KWR 405 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #