data_7GC3 # _model_server_result.job_id MG0n47VgIePuPBxUOL5QDQ _model_server_result.datetime_utc '2024-11-04 18:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gc3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 7GC3 # _exptl.entry_id 7GC3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.57 _cell.angle_gamma 90 _cell.entry_id 7GC3 _cell.length_a 113.375 _cell.length_b 53.098 _cell.length_c 44.374 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GC3 _atom_sites.fract_transf_matrix[1][1] 0.00882 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001967 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018833 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023089 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 2 DMS A 1 404 1006 DMS DMS . F 3 L7V A 1 405 4000 L7V LIG . G 4 HOH A 1 501 65 HOH HOH . G 4 HOH A 2 502 38 HOH HOH . G 4 HOH A 3 503 269 HOH HOH . G 4 HOH A 4 504 108 HOH HOH . G 4 HOH A 5 505 142 HOH HOH . G 4 HOH A 6 506 298 HOH HOH . G 4 HOH A 7 507 297 HOH HOH . G 4 HOH A 8 508 144 HOH HOH . G 4 HOH A 9 509 166 HOH HOH . G 4 HOH A 10 510 72 HOH HOH . G 4 HOH A 11 511 9 HOH HOH . G 4 HOH A 12 512 104 HOH HOH . G 4 HOH A 13 513 149 HOH HOH . G 4 HOH A 14 514 103 HOH HOH . G 4 HOH A 15 515 21 HOH HOH . G 4 HOH A 16 516 167 HOH HOH . G 4 HOH A 17 517 35 HOH HOH . G 4 HOH A 18 518 207 HOH HOH . G 4 HOH A 19 519 109 HOH HOH . G 4 HOH A 20 520 275 HOH HOH . G 4 HOH A 21 521 34 HOH HOH . G 4 HOH A 22 522 222 HOH HOH . G 4 HOH A 23 523 268 HOH HOH . G 4 HOH A 24 524 148 HOH HOH . G 4 HOH A 25 525 98 HOH HOH . G 4 HOH A 26 526 211 HOH HOH . G 4 HOH A 27 527 92 HOH HOH . G 4 HOH A 28 528 10 HOH HOH . G 4 HOH A 29 529 62 HOH HOH . G 4 HOH A 30 530 68 HOH HOH . G 4 HOH A 31 531 55 HOH HOH . G 4 HOH A 32 532 197 HOH HOH . G 4 HOH A 33 533 5 HOH HOH . G 4 HOH A 34 534 295 HOH HOH . G 4 HOH A 35 535 260 HOH HOH . G 4 HOH A 36 536 255 HOH HOH . G 4 HOH A 37 537 84 HOH HOH . G 4 HOH A 38 538 81 HOH HOH . G 4 HOH A 39 539 182 HOH HOH . G 4 HOH A 40 540 102 HOH HOH . G 4 HOH A 41 541 43 HOH HOH . G 4 HOH A 42 542 52 HOH HOH . G 4 HOH A 43 543 29 HOH HOH . G 4 HOH A 44 544 152 HOH HOH . G 4 HOH A 45 545 44 HOH HOH . G 4 HOH A 46 546 76 HOH HOH . G 4 HOH A 47 547 163 HOH HOH . G 4 HOH A 48 548 292 HOH HOH . G 4 HOH A 49 549 264 HOH HOH . G 4 HOH A 50 550 20 HOH HOH . G 4 HOH A 51 551 111 HOH HOH . G 4 HOH A 52 552 66 HOH HOH . G 4 HOH A 53 553 1 HOH HOH . G 4 HOH A 54 554 78 HOH HOH . G 4 HOH A 55 555 87 HOH HOH . G 4 HOH A 56 556 24 HOH HOH . G 4 HOH A 57 557 75 HOH HOH . G 4 HOH A 58 558 130 HOH HOH . G 4 HOH A 59 559 12 HOH HOH . G 4 HOH A 60 560 54 HOH HOH . G 4 HOH A 61 561 112 HOH HOH . G 4 HOH A 62 562 161 HOH HOH . G 4 HOH A 63 563 82 HOH HOH . G 4 HOH A 64 564 19 HOH HOH . G 4 HOH A 65 565 39 HOH HOH . G 4 HOH A 66 566 71 HOH HOH . G 4 HOH A 67 567 6 HOH HOH . G 4 HOH A 68 568 155 HOH HOH . G 4 HOH A 69 569 165 HOH HOH . G 4 HOH A 70 570 177 HOH HOH . G 4 HOH A 71 571 115 HOH HOH . G 4 HOH A 72 572 202 HOH HOH . G 4 HOH A 73 573 64 HOH HOH . G 4 HOH A 74 574 110 HOH HOH . G 4 HOH A 75 575 101 HOH HOH . G 4 HOH A 76 576 176 HOH HOH . G 4 HOH A 77 577 67 HOH HOH . G 4 HOH A 78 578 287 HOH HOH . G 4 HOH A 79 579 285 HOH HOH . G 4 HOH A 80 580 143 HOH HOH . G 4 HOH A 81 581 214 HOH HOH . G 4 HOH A 82 582 133 HOH HOH . G 4 HOH A 83 583 242 HOH HOH . G 4 HOH A 84 584 4 HOH HOH . G 4 HOH A 85 585 240 HOH HOH . G 4 HOH A 86 586 79 HOH HOH . G 4 HOH A 87 587 125 HOH HOH . G 4 HOH A 88 588 218 HOH HOH . G 4 HOH A 89 589 276 HOH HOH . G 4 HOH A 90 590 7 HOH HOH . G 4 HOH A 91 591 31 HOH HOH . G 4 HOH A 92 592 30 HOH HOH . G 4 HOH A 93 593 15 HOH HOH . G 4 HOH A 94 594 243 HOH HOH . G 4 HOH A 95 595 294 HOH HOH . G 4 HOH A 96 596 47 HOH HOH . G 4 HOH A 97 597 85 HOH HOH . G 4 HOH A 98 598 262 HOH HOH . G 4 HOH A 99 599 3 HOH HOH . G 4 HOH A 100 600 91 HOH HOH . G 4 HOH A 101 601 239 HOH HOH . G 4 HOH A 102 602 18 HOH HOH . G 4 HOH A 103 603 61 HOH HOH . G 4 HOH A 104 604 217 HOH HOH . G 4 HOH A 105 605 14 HOH HOH . G 4 HOH A 106 606 184 HOH HOH . G 4 HOH A 107 607 42 HOH HOH . G 4 HOH A 108 608 26 HOH HOH . G 4 HOH A 109 609 63 HOH HOH . G 4 HOH A 110 610 150 HOH HOH . G 4 HOH A 111 611 135 HOH HOH . G 4 HOH A 112 612 33 HOH HOH . G 4 HOH A 113 613 37 HOH HOH . G 4 HOH A 114 614 257 HOH HOH . G 4 HOH A 115 615 11 HOH HOH . G 4 HOH A 116 616 2 HOH HOH . G 4 HOH A 117 617 302 HOH HOH . G 4 HOH A 118 618 117 HOH HOH . G 4 HOH A 119 619 300 HOH HOH . G 4 HOH A 120 620 206 HOH HOH . G 4 HOH A 121 621 17 HOH HOH . G 4 HOH A 122 622 83 HOH HOH . G 4 HOH A 123 623 248 HOH HOH . G 4 HOH A 124 624 114 HOH HOH . G 4 HOH A 125 625 204 HOH HOH . G 4 HOH A 126 626 141 HOH HOH . G 4 HOH A 127 627 153 HOH HOH . G 4 HOH A 128 628 210 HOH HOH . G 4 HOH A 129 629 220 HOH HOH . G 4 HOH A 130 630 57 HOH HOH . G 4 HOH A 131 631 169 HOH HOH . G 4 HOH A 132 632 28 HOH HOH . G 4 HOH A 133 633 283 HOH HOH . G 4 HOH A 134 634 139 HOH HOH . G 4 HOH A 135 635 46 HOH HOH . G 4 HOH A 136 636 100 HOH HOH . G 4 HOH A 137 637 265 HOH HOH . G 4 HOH A 138 638 95 HOH HOH . G 4 HOH A 139 639 198 HOH HOH . G 4 HOH A 140 640 106 HOH HOH . G 4 HOH A 141 641 99 HOH HOH . G 4 HOH A 142 642 219 HOH HOH . G 4 HOH A 143 643 27 HOH HOH . G 4 HOH A 144 644 128 HOH HOH . G 4 HOH A 145 645 58 HOH HOH . G 4 HOH A 146 646 51 HOH HOH . G 4 HOH A 147 647 56 HOH HOH . G 4 HOH A 148 648 168 HOH HOH . G 4 HOH A 149 649 205 HOH HOH . G 4 HOH A 150 650 41 HOH HOH . G 4 HOH A 151 651 129 HOH HOH . G 4 HOH A 152 652 60 HOH HOH . G 4 HOH A 153 653 223 HOH HOH . G 4 HOH A 154 654 93 HOH HOH . G 4 HOH A 155 655 77 HOH HOH . G 4 HOH A 156 656 157 HOH HOH . G 4 HOH A 157 657 86 HOH HOH . G 4 HOH A 158 658 80 HOH HOH . G 4 HOH A 159 659 124 HOH HOH . G 4 HOH A 160 660 200 HOH HOH . G 4 HOH A 161 661 123 HOH HOH . G 4 HOH A 162 662 32 HOH HOH . G 4 HOH A 163 663 271 HOH HOH . G 4 HOH A 164 664 160 HOH HOH . G 4 HOH A 165 665 13 HOH HOH . G 4 HOH A 166 666 274 HOH HOH . G 4 HOH A 167 667 119 HOH HOH . G 4 HOH A 168 668 59 HOH HOH . G 4 HOH A 169 669 186 HOH HOH . G 4 HOH A 170 670 50 HOH HOH . G 4 HOH A 171 671 208 HOH HOH . G 4 HOH A 172 672 88 HOH HOH . G 4 HOH A 173 673 261 HOH HOH . G 4 HOH A 174 674 278 HOH HOH . G 4 HOH A 175 675 74 HOH HOH . G 4 HOH A 176 676 113 HOH HOH . G 4 HOH A 177 677 136 HOH HOH . G 4 HOH A 178 678 221 HOH HOH . G 4 HOH A 179 679 94 HOH HOH . G 4 HOH A 180 680 140 HOH HOH . G 4 HOH A 181 681 122 HOH HOH . G 4 HOH A 182 682 293 HOH HOH . G 4 HOH A 183 683 170 HOH HOH . G 4 HOH A 184 684 162 HOH HOH . G 4 HOH A 185 685 22 HOH HOH . G 4 HOH A 186 686 120 HOH HOH . G 4 HOH A 187 687 107 HOH HOH . G 4 HOH A 188 688 23 HOH HOH . G 4 HOH A 189 689 237 HOH HOH . G 4 HOH A 190 690 282 HOH HOH . G 4 HOH A 191 691 236 HOH HOH . G 4 HOH A 192 692 121 HOH HOH . G 4 HOH A 193 693 16 HOH HOH . G 4 HOH A 194 694 70 HOH HOH . G 4 HOH A 195 695 8 HOH HOH . G 4 HOH A 196 696 199 HOH HOH . G 4 HOH A 197 697 175 HOH HOH . G 4 HOH A 198 698 188 HOH HOH . G 4 HOH A 199 699 53 HOH HOH . G 4 HOH A 200 700 213 HOH HOH . G 4 HOH A 201 701 126 HOH HOH . G 4 HOH A 202 702 289 HOH HOH . G 4 HOH A 203 703 49 HOH HOH . G 4 HOH A 204 704 224 HOH HOH . G 4 HOH A 205 705 180 HOH HOH . G 4 HOH A 206 706 147 HOH HOH . G 4 HOH A 207 707 187 HOH HOH . G 4 HOH A 208 708 173 HOH HOH . G 4 HOH A 209 709 178 HOH HOH . G 4 HOH A 210 710 301 HOH HOH . G 4 HOH A 211 711 273 HOH HOH . G 4 HOH A 212 712 244 HOH HOH . G 4 HOH A 213 713 281 HOH HOH . G 4 HOH A 214 714 203 HOH HOH . G 4 HOH A 215 715 296 HOH HOH . G 4 HOH A 216 716 96 HOH HOH . G 4 HOH A 217 717 252 HOH HOH . G 4 HOH A 218 718 25 HOH HOH . G 4 HOH A 219 719 45 HOH HOH . G 4 HOH A 220 720 156 HOH HOH . G 4 HOH A 221 721 288 HOH HOH . G 4 HOH A 222 722 90 HOH HOH . G 4 HOH A 223 723 172 HOH HOH . G 4 HOH A 224 724 267 HOH HOH . G 4 HOH A 225 725 191 HOH HOH . G 4 HOH A 226 726 73 HOH HOH . G 4 HOH A 227 727 131 HOH HOH . G 4 HOH A 228 728 277 HOH HOH . G 4 HOH A 229 729 251 HOH HOH . G 4 HOH A 230 730 164 HOH HOH . G 4 HOH A 231 731 116 HOH HOH . G 4 HOH A 232 732 233 HOH HOH . G 4 HOH A 233 733 235 HOH HOH . G 4 HOH A 234 734 280 HOH HOH . G 4 HOH A 235 735 254 HOH HOH . G 4 HOH A 236 736 228 HOH HOH . G 4 HOH A 237 737 215 HOH HOH . G 4 HOH A 238 738 259 HOH HOH . G 4 HOH A 239 739 138 HOH HOH . G 4 HOH A 240 740 137 HOH HOH . G 4 HOH A 241 741 185 HOH HOH . G 4 HOH A 242 742 105 HOH HOH . G 4 HOH A 243 743 201 HOH HOH . G 4 HOH A 244 744 196 HOH HOH . G 4 HOH A 245 745 159 HOH HOH . G 4 HOH A 246 746 145 HOH HOH . G 4 HOH A 247 747 266 HOH HOH . G 4 HOH A 248 748 216 HOH HOH . G 4 HOH A 249 749 238 HOH HOH . G 4 HOH A 250 750 193 HOH HOH . G 4 HOH A 251 751 284 HOH HOH . G 4 HOH A 252 752 48 HOH HOH . G 4 HOH A 253 753 171 HOH HOH . G 4 HOH A 254 754 118 HOH HOH . G 4 HOH A 255 755 232 HOH HOH . G 4 HOH A 256 756 229 HOH HOH . G 4 HOH A 257 757 304 HOH HOH . G 4 HOH A 258 758 190 HOH HOH . G 4 HOH A 259 759 231 HOH HOH . G 4 HOH A 260 760 291 HOH HOH . G 4 HOH A 261 761 146 HOH HOH . G 4 HOH A 262 762 247 HOH HOH . G 4 HOH A 263 763 303 HOH HOH . G 4 HOH A 264 764 89 HOH HOH . G 4 HOH A 265 765 183 HOH HOH . G 4 HOH A 266 766 306 HOH HOH . G 4 HOH A 267 767 189 HOH HOH . G 4 HOH A 268 768 263 HOH HOH . G 4 HOH A 269 769 230 HOH HOH . G 4 HOH A 270 770 69 HOH HOH . G 4 HOH A 271 771 40 HOH HOH . G 4 HOH A 272 772 305 HOH HOH . G 4 HOH A 273 773 290 HOH HOH . G 4 HOH A 274 774 194 HOH HOH . G 4 HOH A 275 775 97 HOH HOH . G 4 HOH A 276 776 256 HOH HOH . G 4 HOH A 277 777 174 HOH HOH . G 4 HOH A 278 778 258 HOH HOH . G 4 HOH A 279 779 195 HOH HOH . G 4 HOH A 280 780 212 HOH HOH . G 4 HOH A 281 781 249 HOH HOH . G 4 HOH A 282 782 241 HOH HOH . G 4 HOH A 283 783 132 HOH HOH . G 4 HOH A 284 784 227 HOH HOH . G 4 HOH A 285 785 253 HOH HOH . G 4 HOH A 286 786 192 HOH HOH . G 4 HOH A 287 787 299 HOH HOH . G 4 HOH A 288 788 245 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 2 21 14.595 7.337 1 95.77 ? S DMS 404 A 1 HETATM 2 O O DMS . . . E 2 21.994 15.654 7.085 1 94.06 ? O DMS 404 A 1 HETATM 3 C C1 DMS . . . E 2 21.65 13.641 8.681 1 93.26 ? C1 DMS 404 A 1 HETATM 4 C C2 DMS . . . E 2 21.245 13.444 6.02 1 92.68 ? C2 DMS 404 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #