data_7GC4 # _model_server_result.job_id O9R8GykWwlhKE9qgWZVOxg _model_server_result.datetime_utc '2025-06-22 18:25:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gc4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 7GC4 # _exptl.entry_id 7GC4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 275.733 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-amino-4-methylpyridin-3-yl)-2-(3-chlorophenyl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.73 _cell.angle_gamma 90 _cell.entry_id 7GC4 _cell.length_a 113.433 _cell.length_b 53.281 _cell.length_c 44.119 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GC4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H14 Cl N3 O' _chem_comp.formula_weight 275.733 _chem_comp.id L83 _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-amino-4-methylpyridin-3-yl)-2-(3-chlorophenyl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C3 L83 doub 182 n y N C4 L83 sing 183 n y C3 C2 L83 sing 184 n y N1 C4 L83 sing 185 n n C4 C5 L83 doub 186 n y C2 C1 L83 doub 187 n y C5 C1 L83 sing 188 n y C5 N2 L83 sing 189 n n C1 C L83 sing 190 n n N2 C6 L83 sing 191 n n CL C12 L83 sing 192 n n O C6 L83 doub 193 n n C6 C7 L83 sing 194 n n C13 C12 L83 doub 195 n y C13 C8 L83 sing 196 n y C12 C11 L83 sing 197 n y C7 C8 L83 sing 198 n n C8 C9 L83 doub 199 n y C11 C10 L83 doub 200 n y C9 C10 L83 sing 201 n y N1 H1 L83 sing 202 n n N1 H2 L83 sing 203 n n C7 H3 L83 sing 204 n n C7 H4 L83 sing 205 n n C10 H5 L83 sing 206 n n C13 H6 L83 sing 207 n n N2 H7 L83 sing 208 n n C11 H8 L83 sing 209 n n C2 H9 L83 sing 210 n n C9 H10 L83 sing 211 n n C H11 L83 sing 212 n n C H12 L83 sing 213 n n C H13 L83 sing 214 n n C3 H14 L83 sing 215 n n # _atom_sites.entry_id 7GC4 _atom_sites.fract_transf_matrix[1][1] 0.008816 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001992 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 2 DMS A 1 404 1006 DMS DMS . F 3 L83 A 1 405 4000 L83 LIG . G 2 DMS A 1 406 4101 DMS DMS . H 4 HOH A 1 501 63 HOH HOH . H 4 HOH A 2 502 270 HOH HOH . H 4 HOH A 3 503 25 HOH HOH . H 4 HOH A 4 504 249 HOH HOH . H 4 HOH A 5 505 29 HOH HOH . H 4 HOH A 6 506 153 HOH HOH . H 4 HOH A 7 507 94 HOH HOH . H 4 HOH A 8 508 138 HOH HOH . H 4 HOH A 9 509 156 HOH HOH . H 4 HOH A 10 510 214 HOH HOH . H 4 HOH A 11 511 35 HOH HOH . H 4 HOH A 12 512 106 HOH HOH . H 4 HOH A 13 513 90 HOH HOH . H 4 HOH A 14 514 275 HOH HOH . H 4 HOH A 15 515 96 HOH HOH . H 4 HOH A 16 516 132 HOH HOH . H 4 HOH A 17 517 234 HOH HOH . H 4 HOH A 18 518 70 HOH HOH . H 4 HOH A 19 519 9 HOH HOH . H 4 HOH A 20 520 194 HOH HOH . H 4 HOH A 21 521 42 HOH HOH . H 4 HOH A 22 522 60 HOH HOH . H 4 HOH A 23 523 34 HOH HOH . H 4 HOH A 24 524 1 HOH HOH . H 4 HOH A 25 525 82 HOH HOH . H 4 HOH A 26 526 221 HOH HOH . H 4 HOH A 27 527 206 HOH HOH . H 4 HOH A 28 528 172 HOH HOH . H 4 HOH A 29 529 168 HOH HOH . H 4 HOH A 30 530 53 HOH HOH . H 4 HOH A 31 531 193 HOH HOH . H 4 HOH A 32 532 220 HOH HOH . H 4 HOH A 33 533 139 HOH HOH . H 4 HOH A 34 534 148 HOH HOH . H 4 HOH A 35 535 4 HOH HOH . H 4 HOH A 36 536 265 HOH HOH . H 4 HOH A 37 537 13 HOH HOH . H 4 HOH A 38 538 79 HOH HOH . H 4 HOH A 39 539 50 HOH HOH . H 4 HOH A 40 540 111 HOH HOH . H 4 HOH A 41 541 141 HOH HOH . H 4 HOH A 42 542 49 HOH HOH . H 4 HOH A 43 543 62 HOH HOH . H 4 HOH A 44 544 10 HOH HOH . H 4 HOH A 45 545 162 HOH HOH . H 4 HOH A 46 546 11 HOH HOH . H 4 HOH A 47 547 240 HOH HOH . H 4 HOH A 48 548 66 HOH HOH . H 4 HOH A 49 549 120 HOH HOH . H 4 HOH A 50 550 74 HOH HOH . H 4 HOH A 51 551 45 HOH HOH . H 4 HOH A 52 552 201 HOH HOH . H 4 HOH A 53 553 43 HOH HOH . H 4 HOH A 54 554 36 HOH HOH . H 4 HOH A 55 555 3 HOH HOH . H 4 HOH A 56 556 253 HOH HOH . H 4 HOH A 57 557 196 HOH HOH . H 4 HOH A 58 558 28 HOH HOH . H 4 HOH A 59 559 100 HOH HOH . H 4 HOH A 60 560 89 HOH HOH . H 4 HOH A 61 561 169 HOH HOH . H 4 HOH A 62 562 52 HOH HOH . H 4 HOH A 63 563 158 HOH HOH . H 4 HOH A 64 564 251 HOH HOH . H 4 HOH A 65 565 107 HOH HOH . H 4 HOH A 66 566 112 HOH HOH . H 4 HOH A 67 567 159 HOH HOH . H 4 HOH A 68 568 271 HOH HOH . H 4 HOH A 69 569 102 HOH HOH . H 4 HOH A 70 570 241 HOH HOH . H 4 HOH A 71 571 64 HOH HOH . H 4 HOH A 72 572 154 HOH HOH . H 4 HOH A 73 573 205 HOH HOH . H 4 HOH A 74 574 269 HOH HOH . H 4 HOH A 75 575 77 HOH HOH . H 4 HOH A 76 576 21 HOH HOH . H 4 HOH A 77 577 59 HOH HOH . H 4 HOH A 78 578 258 HOH HOH . H 4 HOH A 79 579 51 HOH HOH . H 4 HOH A 80 580 150 HOH HOH . H 4 HOH A 81 581 248 HOH HOH . H 4 HOH A 82 582 99 HOH HOH . H 4 HOH A 83 583 244 HOH HOH . H 4 HOH A 84 584 55 HOH HOH . H 4 HOH A 85 585 37 HOH HOH . H 4 HOH A 86 586 38 HOH HOH . H 4 HOH A 87 587 108 HOH HOH . H 4 HOH A 88 588 272 HOH HOH . H 4 HOH A 89 589 73 HOH HOH . H 4 HOH A 90 590 12 HOH HOH . H 4 HOH A 91 591 126 HOH HOH . H 4 HOH A 92 592 30 HOH HOH . H 4 HOH A 93 593 85 HOH HOH . H 4 HOH A 94 594 130 HOH HOH . H 4 HOH A 95 595 145 HOH HOH . H 4 HOH A 96 596 254 HOH HOH . H 4 HOH A 97 597 17 HOH HOH . H 4 HOH A 98 598 109 HOH HOH . H 4 HOH A 99 599 125 HOH HOH . H 4 HOH A 100 600 121 HOH HOH . H 4 HOH A 101 601 19 HOH HOH . H 4 HOH A 102 602 80 HOH HOH . H 4 HOH A 103 603 33 HOH HOH . H 4 HOH A 104 604 24 HOH HOH . H 4 HOH A 105 605 20 HOH HOH . H 4 HOH A 106 606 65 HOH HOH . H 4 HOH A 107 607 91 HOH HOH . H 4 HOH A 108 608 190 HOH HOH . H 4 HOH A 109 609 26 HOH HOH . H 4 HOH A 110 610 69 HOH HOH . H 4 HOH A 111 611 140 HOH HOH . H 4 HOH A 112 612 152 HOH HOH . H 4 HOH A 113 613 6 HOH HOH . H 4 HOH A 114 614 5 HOH HOH . H 4 HOH A 115 615 61 HOH HOH . H 4 HOH A 116 616 127 HOH HOH . H 4 HOH A 117 617 262 HOH HOH . H 4 HOH A 118 618 81 HOH HOH . H 4 HOH A 119 619 40 HOH HOH . H 4 HOH A 120 620 27 HOH HOH . H 4 HOH A 121 621 110 HOH HOH . H 4 HOH A 122 622 75 HOH HOH . H 4 HOH A 123 623 204 HOH HOH . H 4 HOH A 124 624 15 HOH HOH . H 4 HOH A 125 625 83 HOH HOH . H 4 HOH A 126 626 41 HOH HOH . H 4 HOH A 127 627 76 HOH HOH . H 4 HOH A 128 628 255 HOH HOH . H 4 HOH A 129 629 263 HOH HOH . H 4 HOH A 130 630 183 HOH HOH . H 4 HOH A 131 631 93 HOH HOH . H 4 HOH A 132 632 7 HOH HOH . H 4 HOH A 133 633 8 HOH HOH . H 4 HOH A 134 634 256 HOH HOH . H 4 HOH A 135 635 219 HOH HOH . H 4 HOH A 136 636 117 HOH HOH . H 4 HOH A 137 637 261 HOH HOH . H 4 HOH A 138 638 86 HOH HOH . H 4 HOH A 139 639 58 HOH HOH . H 4 HOH A 140 640 195 HOH HOH . H 4 HOH A 141 641 32 HOH HOH . H 4 HOH A 142 642 149 HOH HOH . H 4 HOH A 143 643 2 HOH HOH . H 4 HOH A 144 644 122 HOH HOH . H 4 HOH A 145 645 56 HOH HOH . H 4 HOH A 146 646 161 HOH HOH . H 4 HOH A 147 647 97 HOH HOH . H 4 HOH A 148 648 78 HOH HOH . H 4 HOH A 149 649 44 HOH HOH . H 4 HOH A 150 650 229 HOH HOH . H 4 HOH A 151 651 98 HOH HOH . H 4 HOH A 152 652 237 HOH HOH . H 4 HOH A 153 653 173 HOH HOH . H 4 HOH A 154 654 250 HOH HOH . H 4 HOH A 155 655 203 HOH HOH . H 4 HOH A 156 656 178 HOH HOH . H 4 HOH A 157 657 192 HOH HOH . H 4 HOH A 158 658 72 HOH HOH . H 4 HOH A 159 659 207 HOH HOH . H 4 HOH A 160 660 273 HOH HOH . H 4 HOH A 161 661 146 HOH HOH . H 4 HOH A 162 662 160 HOH HOH . H 4 HOH A 163 663 202 HOH HOH . H 4 HOH A 164 664 135 HOH HOH . H 4 HOH A 165 665 14 HOH HOH . H 4 HOH A 166 666 186 HOH HOH . H 4 HOH A 167 667 185 HOH HOH . H 4 HOH A 168 668 22 HOH HOH . H 4 HOH A 169 669 223 HOH HOH . H 4 HOH A 170 670 84 HOH HOH . H 4 HOH A 171 671 155 HOH HOH . H 4 HOH A 172 672 31 HOH HOH . H 4 HOH A 173 673 18 HOH HOH . H 4 HOH A 174 674 242 HOH HOH . H 4 HOH A 175 675 257 HOH HOH . H 4 HOH A 176 676 171 HOH HOH . H 4 HOH A 177 677 136 HOH HOH . H 4 HOH A 178 678 68 HOH HOH . H 4 HOH A 179 679 216 HOH HOH . H 4 HOH A 180 680 133 HOH HOH . H 4 HOH A 181 681 252 HOH HOH . H 4 HOH A 182 682 119 HOH HOH . H 4 HOH A 183 683 188 HOH HOH . H 4 HOH A 184 684 54 HOH HOH . H 4 HOH A 185 685 114 HOH HOH . H 4 HOH A 186 686 123 HOH HOH . H 4 HOH A 187 687 116 HOH HOH . H 4 HOH A 188 688 198 HOH HOH . H 4 HOH A 189 689 144 HOH HOH . H 4 HOH A 190 690 16 HOH HOH . H 4 HOH A 191 691 170 HOH HOH . H 4 HOH A 192 692 92 HOH HOH . H 4 HOH A 193 693 137 HOH HOH . H 4 HOH A 194 694 233 HOH HOH . H 4 HOH A 195 695 48 HOH HOH . H 4 HOH A 196 696 151 HOH HOH . H 4 HOH A 197 697 47 HOH HOH . H 4 HOH A 198 698 182 HOH HOH . H 4 HOH A 199 699 208 HOH HOH . H 4 HOH A 200 700 23 HOH HOH . H 4 HOH A 201 701 101 HOH HOH . H 4 HOH A 202 702 217 HOH HOH . H 4 HOH A 203 703 176 HOH HOH . H 4 HOH A 204 704 232 HOH HOH . H 4 HOH A 205 705 227 HOH HOH . H 4 HOH A 206 706 243 HOH HOH . H 4 HOH A 207 707 189 HOH HOH . H 4 HOH A 208 708 105 HOH HOH . H 4 HOH A 209 709 118 HOH HOH . H 4 HOH A 210 710 175 HOH HOH . H 4 HOH A 211 711 164 HOH HOH . H 4 HOH A 212 712 222 HOH HOH . H 4 HOH A 213 713 245 HOH HOH . H 4 HOH A 214 714 210 HOH HOH . H 4 HOH A 215 715 128 HOH HOH . H 4 HOH A 216 716 247 HOH HOH . H 4 HOH A 217 717 260 HOH HOH . H 4 HOH A 218 718 179 HOH HOH . H 4 HOH A 219 719 239 HOH HOH . H 4 HOH A 220 720 88 HOH HOH . H 4 HOH A 221 721 225 HOH HOH . H 4 HOH A 222 722 104 HOH HOH . H 4 HOH A 223 723 71 HOH HOH . H 4 HOH A 224 724 212 HOH HOH . H 4 HOH A 225 725 224 HOH HOH . H 4 HOH A 226 726 147 HOH HOH . H 4 HOH A 227 727 187 HOH HOH . H 4 HOH A 228 728 57 HOH HOH . H 4 HOH A 229 729 191 HOH HOH . H 4 HOH A 230 730 200 HOH HOH . H 4 HOH A 231 731 103 HOH HOH . H 4 HOH A 232 732 259 HOH HOH . H 4 HOH A 233 733 167 HOH HOH . H 4 HOH A 234 734 215 HOH HOH . H 4 HOH A 235 735 199 HOH HOH . H 4 HOH A 236 736 163 HOH HOH . H 4 HOH A 237 737 113 HOH HOH . H 4 HOH A 238 738 218 HOH HOH . H 4 HOH A 239 739 235 HOH HOH . H 4 HOH A 240 740 184 HOH HOH . H 4 HOH A 241 741 165 HOH HOH . H 4 HOH A 242 742 213 HOH HOH . H 4 HOH A 243 743 181 HOH HOH . H 4 HOH A 244 744 246 HOH HOH . H 4 HOH A 245 745 174 HOH HOH . H 4 HOH A 246 746 134 HOH HOH . H 4 HOH A 247 747 230 HOH HOH . H 4 HOH A 248 748 157 HOH HOH . H 4 HOH A 249 749 211 HOH HOH . H 4 HOH A 250 750 142 HOH HOH . H 4 HOH A 251 751 46 HOH HOH . H 4 HOH A 252 752 87 HOH HOH . H 4 HOH A 253 753 267 HOH HOH . H 4 HOH A 254 754 115 HOH HOH . H 4 HOH A 255 755 231 HOH HOH . H 4 HOH A 256 756 124 HOH HOH . H 4 HOH A 257 757 177 HOH HOH . H 4 HOH A 258 758 143 HOH HOH . H 4 HOH A 259 759 67 HOH HOH . H 4 HOH A 260 760 268 HOH HOH . H 4 HOH A 261 761 264 HOH HOH . H 4 HOH A 262 762 39 HOH HOH . H 4 HOH A 263 763 197 HOH HOH . H 4 HOH A 264 764 266 HOH HOH . H 4 HOH A 265 765 131 HOH HOH . H 4 HOH A 266 766 209 HOH HOH . H 4 HOH A 267 767 129 HOH HOH . H 4 HOH A 268 768 228 HOH HOH . H 4 HOH A 269 769 166 HOH HOH . H 4 HOH A 270 770 238 HOH HOH . H 4 HOH A 271 771 95 HOH HOH . H 4 HOH A 272 772 236 HOH HOH . H 4 HOH A 273 773 274 HOH HOH . H 4 HOH A 274 774 226 HOH HOH . H 4 HOH A 275 775 180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 L83 . . . F 3 8.412 -0.888 18.172 1 29.35 ? N1 L83 405 A 1 HETATM 2 C C4 L83 . . . F 3 7.363 -0.121 18.484 1 29.61 ? C4 L83 405 A 1 HETATM 3 C C5 L83 . . . F 3 6.948 0.06 19.825 1 29.78 ? C5 L83 405 A 1 HETATM 4 C C6 L83 . . . F 3 8.813 -0.101 21.38 1 29.84 ? C6 L83 405 A 1 HETATM 5 C C7 L83 . . . F 3 9.328 -0.863 22.586 1 30.46 ? C7 L83 405 A 1 HETATM 6 C C8 L83 . . . F 3 10.823 -0.725 22.749 1 30.93 ? C8 L83 405 A 1 HETATM 7 C C10 L83 . . . F 3 12.736 0.262 23.84 1 30.93 ? C10 L83 405 A 1 HETATM 8 C C13 L83 . . . F 3 11.68 -1.34 21.844 1 30.98 ? C13 L83 405 A 1 HETATM 9 N N L83 . . . F 3 6.706 0.496 17.472 1 29.65 ? N L83 405 A 1 HETATM 10 N N2 L83 . . . F 3 7.649 -0.567 20.885 1 29.79 ? N2 L83 405 A 1 HETATM 11 C C1 L83 . . . F 3 5.848 0.881 20.104 1 29.98 ? C1 L83 405 A 1 HETATM 12 C C11 L83 . . . F 3 13.585 -0.33 22.92 1 30.7 ? C11 L83 405 A 1 HETATM 13 C C2 L83 . . . F 3 5.192 1.478 19.035 1 29.98 ? C2 L83 405 A 1 HETATM 14 C C9 L83 . . . F 3 11.366 0.057 23.76 1 30.98 ? C9 L83 405 A 1 HETATM 15 C C12 L83 . . . F 3 13.042 -1.151 21.954 1 30.76 ? C12 L83 405 A 1 HETATM 16 C C L83 . . . F 3 5.379 1.122 21.517 1 29.67 ? C L83 405 A 1 HETATM 17 O O L83 . . . F 3 9.402 0.874 20.922 1 28.97 ? O L83 405 A 1 HETATM 18 C C3 L83 . . . F 3 5.645 1.26 17.756 1 30.01 ? C3 L83 405 A 1 HETATM 19 CL CL L83 . . . F 3 14.1 -2.061 20.914 1 30.62 ? CL L83 405 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 19 #