data_7GCN # _model_server_result.job_id '_BUvBUgw51-zJ7DJjvExEg' _model_server_result.datetime_utc '2025-01-28 03:31:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gcn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 7GCN # _exptl.entry_id 7GCN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 299.755 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(6-chloro-1H-indol-1-yl)-N-(4-methylpyridin-3-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.76 _cell.angle_gamma 90 _cell.entry_id 7GCN _cell.length_a 112.763 _cell.length_b 53.1 _cell.length_c 44.386 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GCN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H14 Cl N3 O' _chem_comp.formula_weight 299.755 _chem_comp.id LQ0 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(6-chloro-1H-indol-1-yl)-N-(4-methylpyridin-3-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C3 LQ0 doub 203 n y N C4 LQ0 sing 204 n y C3 C2 LQ0 sing 205 n y C4 C5 LQ0 doub 206 n y C2 C1 LQ0 doub 207 n y C5 C1 LQ0 sing 208 n y C5 N1 LQ0 sing 209 n n C1 C LQ0 sing 210 n n N1 C6 LQ0 sing 211 n n CL C13 LQ0 sing 212 n n O C6 LQ0 doub 213 n n C6 C7 LQ0 sing 214 n n C13 C14 LQ0 doub 215 n y C13 C12 LQ0 sing 216 n y C14 C15 LQ0 sing 217 n y C7 N2 LQ0 sing 218 n n C12 C11 LQ0 doub 219 n y C15 N2 LQ0 sing 220 n y C15 C10 LQ0 doub 221 n y N2 C8 LQ0 sing 222 n y C11 C10 LQ0 sing 223 n y C10 C9 LQ0 sing 224 n y C8 C9 LQ0 doub 225 n y N1 H1 LQ0 sing 226 n n C4 H2 LQ0 sing 227 n n C7 H3 LQ0 sing 228 n n C7 H4 LQ0 sing 229 n n C8 H5 LQ0 sing 230 n n C11 H6 LQ0 sing 231 n n C2 H7 LQ0 sing 232 n n C9 H8 LQ0 sing 233 n n C12 H9 LQ0 sing 234 n n C14 H10 LQ0 sing 235 n n C H11 LQ0 sing 236 n n C H12 LQ0 sing 237 n n C H13 LQ0 sing 238 n n C3 H14 LQ0 sing 239 n n # _atom_sites.entry_id 7GCN _atom_sites.fract_transf_matrix[1][1] 0.008868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002008 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018832 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0231 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 2 DMS A 1 404 1006 DMS DMS . F 3 LQ0 A 1 405 4000 LQ0 LIG . G 4 HOH A 1 501 291 HOH HOH . G 4 HOH A 2 502 289 HOH HOH . G 4 HOH A 3 503 123 HOH HOH . G 4 HOH A 4 504 141 HOH HOH . G 4 HOH A 5 505 92 HOH HOH . G 4 HOH A 6 506 25 HOH HOH . G 4 HOH A 7 507 29 HOH HOH . G 4 HOH A 8 508 9 HOH HOH . G 4 HOH A 9 509 109 HOH HOH . G 4 HOH A 10 510 144 HOH HOH . G 4 HOH A 11 511 65 HOH HOH . G 4 HOH A 12 512 269 HOH HOH . G 4 HOH A 13 513 75 HOH HOH . G 4 HOH A 14 514 96 HOH HOH . G 4 HOH A 15 515 125 HOH HOH . G 4 HOH A 16 516 148 HOH HOH . G 4 HOH A 17 517 1 HOH HOH . G 4 HOH A 18 518 122 HOH HOH . G 4 HOH A 19 519 55 HOH HOH . G 4 HOH A 20 520 72 HOH HOH . G 4 HOH A 21 521 62 HOH HOH . G 4 HOH A 22 522 34 HOH HOH . G 4 HOH A 23 523 239 HOH HOH . G 4 HOH A 24 524 243 HOH HOH . G 4 HOH A 25 525 43 HOH HOH . G 4 HOH A 26 526 10 HOH HOH . G 4 HOH A 27 527 110 HOH HOH . G 4 HOH A 28 528 102 HOH HOH . G 4 HOH A 29 529 211 HOH HOH . G 4 HOH A 30 530 24 HOH HOH . G 4 HOH A 31 531 47 HOH HOH . G 4 HOH A 32 532 163 HOH HOH . G 4 HOH A 33 533 83 HOH HOH . G 4 HOH A 34 534 103 HOH HOH . G 4 HOH A 35 535 130 HOH HOH . G 4 HOH A 36 536 35 HOH HOH . G 4 HOH A 37 537 98 HOH HOH . G 4 HOH A 38 538 268 HOH HOH . G 4 HOH A 39 539 104 HOH HOH . G 4 HOH A 40 540 39 HOH HOH . G 4 HOH A 41 541 76 HOH HOH . G 4 HOH A 42 542 182 HOH HOH . G 4 HOH A 43 543 255 HOH HOH . G 4 HOH A 44 544 57 HOH HOH . G 4 HOH A 45 545 44 HOH HOH . G 4 HOH A 46 546 5 HOH HOH . G 4 HOH A 47 547 217 HOH HOH . G 4 HOH A 48 548 294 HOH HOH . G 4 HOH A 49 549 54 HOH HOH . G 4 HOH A 50 550 142 HOH HOH . G 4 HOH A 51 551 296 HOH HOH . G 4 HOH A 52 552 155 HOH HOH . G 4 HOH A 53 553 207 HOH HOH . G 4 HOH A 54 554 292 HOH HOH . G 4 HOH A 55 555 17 HOH HOH . G 4 HOH A 56 556 52 HOH HOH . G 4 HOH A 57 557 161 HOH HOH . G 4 HOH A 58 558 152 HOH HOH . G 4 HOH A 59 559 101 HOH HOH . G 4 HOH A 60 560 82 HOH HOH . G 4 HOH A 61 561 30 HOH HOH . G 4 HOH A 62 562 153 HOH HOH . G 4 HOH A 63 563 68 HOH HOH . G 4 HOH A 64 564 162 HOH HOH . G 4 HOH A 65 565 67 HOH HOH . G 4 HOH A 66 566 270 HOH HOH . G 4 HOH A 67 567 81 HOH HOH . G 4 HOH A 68 568 165 HOH HOH . G 4 HOH A 69 569 114 HOH HOH . G 4 HOH A 70 570 260 HOH HOH . G 4 HOH A 71 571 85 HOH HOH . G 4 HOH A 72 572 4 HOH HOH . G 4 HOH A 73 573 64 HOH HOH . G 4 HOH A 74 574 86 HOH HOH . G 4 HOH A 75 575 3 HOH HOH . G 4 HOH A 76 576 21 HOH HOH . G 4 HOH A 77 577 112 HOH HOH . G 4 HOH A 78 578 66 HOH HOH . G 4 HOH A 79 579 160 HOH HOH . G 4 HOH A 80 580 108 HOH HOH . G 4 HOH A 81 581 61 HOH HOH . G 4 HOH A 82 582 12 HOH HOH . G 4 HOH A 83 583 11 HOH HOH . G 4 HOH A 84 584 42 HOH HOH . G 4 HOH A 85 585 293 HOH HOH . G 4 HOH A 86 586 170 HOH HOH . G 4 HOH A 87 587 60 HOH HOH . G 4 HOH A 88 588 121 HOH HOH . G 4 HOH A 89 589 6 HOH HOH . G 4 HOH A 90 590 91 HOH HOH . G 4 HOH A 91 591 7 HOH HOH . G 4 HOH A 92 592 63 HOH HOH . G 4 HOH A 93 593 78 HOH HOH . G 4 HOH A 94 594 15 HOH HOH . G 4 HOH A 95 595 246 HOH HOH . G 4 HOH A 96 596 41 HOH HOH . G 4 HOH A 97 597 88 HOH HOH . G 4 HOH A 98 598 205 HOH HOH . G 4 HOH A 99 599 19 HOH HOH . G 4 HOH A 100 600 70 HOH HOH . G 4 HOH A 101 601 290 HOH HOH . G 4 HOH A 102 602 147 HOH HOH . G 4 HOH A 103 603 27 HOH HOH . G 4 HOH A 104 604 295 HOH HOH . G 4 HOH A 105 605 20 HOH HOH . G 4 HOH A 106 606 135 HOH HOH . G 4 HOH A 107 607 26 HOH HOH . G 4 HOH A 108 608 93 HOH HOH . G 4 HOH A 109 609 14 HOH HOH . G 4 HOH A 110 610 31 HOH HOH . G 4 HOH A 111 611 37 HOH HOH . G 4 HOH A 112 612 59 HOH HOH . G 4 HOH A 113 613 276 HOH HOH . G 4 HOH A 114 614 184 HOH HOH . G 4 HOH A 115 615 299 HOH HOH . G 4 HOH A 116 616 28 HOH HOH . G 4 HOH A 117 617 139 HOH HOH . G 4 HOH A 118 618 53 HOH HOH . G 4 HOH A 119 619 113 HOH HOH . G 4 HOH A 120 620 2 HOH HOH . G 4 HOH A 121 621 214 HOH HOH . G 4 HOH A 122 622 33 HOH HOH . G 4 HOH A 123 623 58 HOH HOH . G 4 HOH A 124 624 84 HOH HOH . G 4 HOH A 125 625 38 HOH HOH . G 4 HOH A 126 626 195 HOH HOH . G 4 HOH A 127 627 133 HOH HOH . G 4 HOH A 128 628 95 HOH HOH . G 4 HOH A 129 629 71 HOH HOH . G 4 HOH A 130 630 18 HOH HOH . G 4 HOH A 131 631 297 HOH HOH . G 4 HOH A 132 632 219 HOH HOH . G 4 HOH A 133 633 223 HOH HOH . G 4 HOH A 134 634 257 HOH HOH . G 4 HOH A 135 635 143 HOH HOH . G 4 HOH A 136 636 208 HOH HOH . G 4 HOH A 137 637 8 HOH HOH . G 4 HOH A 138 638 204 HOH HOH . G 4 HOH A 139 639 158 HOH HOH . G 4 HOH A 140 640 99 HOH HOH . G 4 HOH A 141 641 56 HOH HOH . G 4 HOH A 142 642 150 HOH HOH . G 4 HOH A 143 643 120 HOH HOH . G 4 HOH A 144 644 100 HOH HOH . G 4 HOH A 145 645 80 HOH HOH . G 4 HOH A 146 646 124 HOH HOH . G 4 HOH A 147 647 111 HOH HOH . G 4 HOH A 148 648 235 HOH HOH . G 4 HOH A 149 649 198 HOH HOH . G 4 HOH A 150 650 32 HOH HOH . G 4 HOH A 151 651 51 HOH HOH . G 4 HOH A 152 652 140 HOH HOH . G 4 HOH A 153 653 117 HOH HOH . G 4 HOH A 154 654 129 HOH HOH . G 4 HOH A 155 655 126 HOH HOH . G 4 HOH A 156 656 166 HOH HOH . G 4 HOH A 157 657 240 HOH HOH . G 4 HOH A 158 658 107 HOH HOH . G 4 HOH A 159 659 262 HOH HOH . G 4 HOH A 160 660 46 HOH HOH . G 4 HOH A 161 661 288 HOH HOH . G 4 HOH A 162 662 16 HOH HOH . G 4 HOH A 163 663 283 HOH HOH . G 4 HOH A 164 664 190 HOH HOH . G 4 HOH A 165 665 22 HOH HOH . G 4 HOH A 166 666 13 HOH HOH . G 4 HOH A 167 667 23 HOH HOH . G 4 HOH A 168 668 119 HOH HOH . G 4 HOH A 169 669 156 HOH HOH . G 4 HOH A 170 670 169 HOH HOH . G 4 HOH A 171 671 242 HOH HOH . G 4 HOH A 172 672 154 HOH HOH . G 4 HOH A 173 673 74 HOH HOH . G 4 HOH A 174 674 298 HOH HOH . G 4 HOH A 175 675 180 HOH HOH . G 4 HOH A 176 676 175 HOH HOH . G 4 HOH A 177 677 168 HOH HOH . G 4 HOH A 178 678 220 HOH HOH . G 4 HOH A 179 679 87 HOH HOH . G 4 HOH A 180 680 274 HOH HOH . G 4 HOH A 181 681 238 HOH HOH . G 4 HOH A 182 682 248 HOH HOH . G 4 HOH A 183 683 151 HOH HOH . G 4 HOH A 184 684 236 HOH HOH . G 4 HOH A 185 685 50 HOH HOH . G 4 HOH A 186 686 173 HOH HOH . G 4 HOH A 187 687 251 HOH HOH . G 4 HOH A 188 688 252 HOH HOH . G 4 HOH A 189 689 90 HOH HOH . G 4 HOH A 190 690 106 HOH HOH . G 4 HOH A 191 691 218 HOH HOH . G 4 HOH A 192 692 45 HOH HOH . G 4 HOH A 193 693 282 HOH HOH . G 4 HOH A 194 694 265 HOH HOH . G 4 HOH A 195 695 200 HOH HOH . G 4 HOH A 196 696 213 HOH HOH . G 4 HOH A 197 697 244 HOH HOH . G 4 HOH A 198 698 49 HOH HOH . G 4 HOH A 199 699 178 HOH HOH . G 4 HOH A 200 700 199 HOH HOH . G 4 HOH A 201 701 187 HOH HOH . G 4 HOH A 202 702 172 HOH HOH . G 4 HOH A 203 703 136 HOH HOH . G 4 HOH A 204 704 131 HOH HOH . G 4 HOH A 205 705 188 HOH HOH . G 4 HOH A 206 706 203 HOH HOH . G 4 HOH A 207 707 281 HOH HOH . G 4 HOH A 208 708 267 HOH HOH . G 4 HOH A 209 709 224 HOH HOH . G 4 HOH A 210 710 277 HOH HOH . G 4 HOH A 211 711 237 HOH HOH . G 4 HOH A 212 712 138 HOH HOH . G 4 HOH A 213 713 228 HOH HOH . G 4 HOH A 214 714 226 HOH HOH . G 4 HOH A 215 715 233 HOH HOH . G 4 HOH A 216 716 171 HOH HOH . G 4 HOH A 217 717 301 HOH HOH . G 4 HOH A 218 718 73 HOH HOH . G 4 HOH A 219 719 216 HOH HOH . G 4 HOH A 220 720 249 HOH HOH . G 4 HOH A 221 721 191 HOH HOH . G 4 HOH A 222 722 186 HOH HOH . G 4 HOH A 223 723 116 HOH HOH . G 4 HOH A 224 724 137 HOH HOH . G 4 HOH A 225 725 201 HOH HOH . G 4 HOH A 226 726 185 HOH HOH . G 4 HOH A 227 727 164 HOH HOH . G 4 HOH A 228 728 280 HOH HOH . G 4 HOH A 229 729 254 HOH HOH . G 4 HOH A 230 730 266 HOH HOH . G 4 HOH A 231 731 105 HOH HOH . G 4 HOH A 232 732 232 HOH HOH . G 4 HOH A 233 733 196 HOH HOH . G 4 HOH A 234 734 263 HOH HOH . G 4 HOH A 235 735 230 HOH HOH . G 4 HOH A 236 736 231 HOH HOH . G 4 HOH A 237 737 145 HOH HOH . G 4 HOH A 238 738 89 HOH HOH . G 4 HOH A 239 739 183 HOH HOH . G 4 HOH A 240 740 194 HOH HOH . G 4 HOH A 241 741 285 HOH HOH . G 4 HOH A 242 742 193 HOH HOH . G 4 HOH A 243 743 229 HOH HOH . G 4 HOH A 244 744 48 HOH HOH . G 4 HOH A 245 745 181 HOH HOH . G 4 HOH A 246 746 118 HOH HOH . G 4 HOH A 247 747 40 HOH HOH . G 4 HOH A 248 748 146 HOH HOH . G 4 HOH A 249 749 247 HOH HOH . G 4 HOH A 250 750 189 HOH HOH . G 4 HOH A 251 751 69 HOH HOH . G 4 HOH A 252 752 241 HOH HOH . G 4 HOH A 253 753 212 HOH HOH . G 4 HOH A 254 754 258 HOH HOH . G 4 HOH A 255 755 127 HOH HOH . G 4 HOH A 256 756 227 HOH HOH . G 4 HOH A 257 757 300 HOH HOH . G 4 HOH A 258 758 97 HOH HOH . G 4 HOH A 259 759 256 HOH HOH . G 4 HOH A 260 760 174 HOH HOH . G 4 HOH A 261 761 245 HOH HOH . G 4 HOH A 262 762 192 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LQ0 . . . F 3 7.178 -0.797 20.712 1 29.22 ? N1 LQ0 405 A 1 HETATM 2 C C4 LQ0 . . . F 3 7.099 -0.077 18.373 1 28.26 ? C4 LQ0 405 A 1 HETATM 3 C C5 LQ0 . . . F 3 6.584 -0.055 19.671 1 28.65 ? C5 LQ0 405 A 1 HETATM 4 C C6 LQ0 . . . F 3 8.296 -0.422 21.356 1 29.92 ? C6 LQ0 405 A 1 HETATM 5 C C7 LQ0 . . . F 3 8.665 -1.318 22.526 1 31.01 ? C7 LQ0 405 A 1 HETATM 6 C C8 LQ0 . . . F 3 9.464 0.103 24.443 1 32.56 ? C8 LQ0 405 A 1 HETATM 7 C C10 LQ0 . . . F 3 11.649 0.24 23.973 1 32.99 ? C10 LQ0 405 A 1 HETATM 8 C C13 LQ0 . . . F 3 13.128 -0.952 21.954 1 33.34 ? C13 LQ0 405 A 1 HETATM 9 C C15 LQ0 . . . F 3 11.046 -0.617 23.036 1 32.83 ? C15 LQ0 405 A 1 HETATM 10 N N LQ0 . . . F 3 6.565 0.618 17.362 1 28.33 ? N LQ0 405 A 1 HETATM 11 N N2 LQ0 . . . F 3 9.695 -0.675 23.332 1 32.2 ? N2 LQ0 405 A 1 HETATM 12 C C1 LQ0 . . . F 3 5.454 0.735 19.944 1 28.56 ? C1 LQ0 405 A 1 HETATM 13 C C11 LQ0 . . . F 3 13.012 0.506 23.846 1 33.18 ? C11 LQ0 405 A 1 HETATM 14 C C2 LQ0 . . . F 3 4.886 1.421 18.877 1 28.57 ? C2 LQ0 405 A 1 HETATM 15 C C9 LQ0 . . . F 3 10.615 0.673 24.863 1 33.02 ? C9 LQ0 405 A 1 HETATM 16 C C12 LQ0 . . . F 3 13.751 -0.08 22.834 1 33.43 ? C12 LQ0 405 A 1 HETATM 17 C C14 LQ0 . . . F 3 11.774 -1.227 22.025 1 33.11 ? C14 LQ0 405 A 1 HETATM 18 C C LQ0 . . . F 3 4.945 0.941 21.348 1 28.71 ? C LQ0 405 A 1 HETATM 19 O O LQ0 . . . F 3 8.956 0.577 21.066 1 29.67 ? O LQ0 405 A 1 HETATM 20 C C3 LQ0 . . . F 3 5.469 1.342 17.626 1 28.57 ? C3 LQ0 405 A 1 HETATM 21 CL CL LQ0 . . . F 3 14.084 -1.764 20.751 1 33.55 ? CL LQ0 405 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 21 #