data_7GCW # _model_server_result.job_id 2qBMrDwa5HP5bENUn-b1VQ _model_server_result.datetime_utc '2024-11-12 20:37:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gcw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7GCW # _exptl.entry_id 7GCW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.15 _cell.angle_gamma 90 _cell.entry_id 7GCW _cell.length_a 114.035 _cell.length_b 53.517 _cell.length_c 44.371 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GCW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 F N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GCW _atom_sites.fract_transf_matrix[1][1] 0.008769 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001728 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018686 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 3 LV9 A 1 404 4000 LV9 LIG . F 2 DMS A 1 405 4101 DMS DMS . G 4 HOH A 1 501 269 HOH HOH . G 4 HOH A 2 502 260 HOH HOH . G 4 HOH A 3 503 222 HOH HOH . G 4 HOH A 4 504 182 HOH HOH . G 4 HOH A 5 505 108 HOH HOH . G 4 HOH A 6 506 29 HOH HOH . G 4 HOH A 7 507 98 HOH HOH . G 4 HOH A 8 508 206 HOH HOH . G 4 HOH A 9 509 125 HOH HOH . G 4 HOH A 10 510 142 HOH HOH . G 4 HOH A 11 511 166 HOH HOH . G 4 HOH A 12 512 149 HOH HOH . G 4 HOH A 13 513 9 HOH HOH . G 4 HOH A 14 514 20 HOH HOH . G 4 HOH A 15 515 328 HOH HOH . G 4 HOH A 16 516 300 HOH HOH . G 4 HOH A 17 517 35 HOH HOH . G 4 HOH A 18 518 314 HOH HOH . G 4 HOH A 19 519 92 HOH HOH . G 4 HOH A 20 520 34 HOH HOH . G 4 HOH A 21 521 293 HOH HOH . G 4 HOH A 22 522 104 HOH HOH . G 4 HOH A 23 523 68 HOH HOH . G 4 HOH A 24 524 52 HOH HOH . G 4 HOH A 25 525 33 HOH HOH . G 4 HOH A 26 526 110 HOH HOH . G 4 HOH A 27 527 167 HOH HOH . G 4 HOH A 28 528 12 HOH HOH . G 4 HOH A 29 529 329 HOH HOH . G 4 HOH A 30 530 186 HOH HOH . G 4 HOH A 31 531 76 HOH HOH . G 4 HOH A 32 532 10 HOH HOH . G 4 HOH A 33 533 44 HOH HOH . G 4 HOH A 34 534 295 HOH HOH . G 4 HOH A 35 535 207 HOH HOH . G 4 HOH A 36 536 175 HOH HOH . G 4 HOH A 37 537 307 HOH HOH . G 4 HOH A 38 538 144 HOH HOH . G 4 HOH A 39 539 62 HOH HOH . G 4 HOH A 40 540 81 HOH HOH . G 4 HOH A 41 541 289 HOH HOH . G 4 HOH A 42 542 39 HOH HOH . G 4 HOH A 43 543 111 HOH HOH . G 4 HOH A 44 544 1 HOH HOH . G 4 HOH A 45 545 306 HOH HOH . G 4 HOH A 46 546 24 HOH HOH . G 4 HOH A 47 547 305 HOH HOH . G 4 HOH A 48 548 55 HOH HOH . G 4 HOH A 49 549 72 HOH HOH . G 4 HOH A 50 550 218 HOH HOH . G 4 HOH A 51 551 271 HOH HOH . G 4 HOH A 52 552 135 HOH HOH . G 4 HOH A 53 553 103 HOH HOH . G 4 HOH A 54 554 152 HOH HOH . G 4 HOH A 55 555 85 HOH HOH . G 4 HOH A 56 556 54 HOH HOH . G 4 HOH A 57 557 325 HOH HOH . G 4 HOH A 58 558 101 HOH HOH . G 4 HOH A 59 559 123 HOH HOH . G 4 HOH A 60 560 161 HOH HOH . G 4 HOH A 61 561 184 HOH HOH . G 4 HOH A 62 562 275 HOH HOH . G 4 HOH A 63 563 155 HOH HOH . G 4 HOH A 64 564 217 HOH HOH . G 4 HOH A 65 565 61 HOH HOH . G 4 HOH A 66 566 323 HOH HOH . G 4 HOH A 67 567 299 HOH HOH . G 4 HOH A 68 568 83 HOH HOH . G 4 HOH A 69 569 162 HOH HOH . G 4 HOH A 70 570 176 HOH HOH . G 4 HOH A 71 571 255 HOH HOH . G 4 HOH A 72 572 30 HOH HOH . G 4 HOH A 73 573 143 HOH HOH . G 4 HOH A 74 574 67 HOH HOH . G 4 HOH A 75 575 21 HOH HOH . G 4 HOH A 76 576 16 HOH HOH . G 4 HOH A 77 577 42 HOH HOH . G 4 HOH A 78 578 114 HOH HOH . G 4 HOH A 79 579 4 HOH HOH . G 4 HOH A 80 580 41 HOH HOH . G 4 HOH A 81 581 15 HOH HOH . G 4 HOH A 82 582 64 HOH HOH . G 4 HOH A 83 583 75 HOH HOH . G 4 HOH A 84 584 71 HOH HOH . G 4 HOH A 85 585 27 HOH HOH . G 4 HOH A 86 586 129 HOH HOH . G 4 HOH A 87 587 43 HOH HOH . G 4 HOH A 88 588 19 HOH HOH . G 4 HOH A 89 589 177 HOH HOH . G 4 HOH A 90 590 264 HOH HOH . G 4 HOH A 91 591 82 HOH HOH . G 4 HOH A 92 592 102 HOH HOH . G 4 HOH A 93 593 276 HOH HOH . G 4 HOH A 94 594 90 HOH HOH . G 4 HOH A 95 595 66 HOH HOH . G 4 HOH A 96 596 77 HOH HOH . G 4 HOH A 97 597 3 HOH HOH . G 4 HOH A 98 598 112 HOH HOH . G 4 HOH A 99 599 303 HOH HOH . G 4 HOH A 100 600 165 HOH HOH . G 4 HOH A 101 601 148 HOH HOH . G 4 HOH A 102 602 130 HOH HOH . G 4 HOH A 103 603 88 HOH HOH . G 4 HOH A 104 604 287 HOH HOH . G 4 HOH A 105 605 31 HOH HOH . G 4 HOH A 106 606 86 HOH HOH . G 4 HOH A 107 607 121 HOH HOH . G 4 HOH A 108 608 322 HOH HOH . G 4 HOH A 109 609 57 HOH HOH . G 4 HOH A 110 610 14 HOH HOH . G 4 HOH A 111 611 133 HOH HOH . G 4 HOH A 112 612 79 HOH HOH . G 4 HOH A 113 613 124 HOH HOH . G 4 HOH A 114 614 117 HOH HOH . G 4 HOH A 115 615 17 HOH HOH . G 4 HOH A 116 616 5 HOH HOH . G 4 HOH A 117 617 84 HOH HOH . G 4 HOH A 118 618 18 HOH HOH . G 4 HOH A 119 619 11 HOH HOH . G 4 HOH A 120 620 60 HOH HOH . G 4 HOH A 121 621 141 HOH HOH . G 4 HOH A 122 622 298 HOH HOH . G 4 HOH A 123 623 214 HOH HOH . G 4 HOH A 124 624 28 HOH HOH . G 4 HOH A 125 625 53 HOH HOH . G 4 HOH A 126 626 163 HOH HOH . G 4 HOH A 127 627 6 HOH HOH . G 4 HOH A 128 628 242 HOH HOH . G 4 HOH A 129 629 26 HOH HOH . G 4 HOH A 130 630 168 HOH HOH . G 4 HOH A 131 631 78 HOH HOH . G 4 HOH A 132 632 51 HOH HOH . G 4 HOH A 133 633 239 HOH HOH . G 4 HOH A 134 634 128 HOH HOH . G 4 HOH A 135 635 37 HOH HOH . G 4 HOH A 136 636 321 HOH HOH . G 4 HOH A 137 637 59 HOH HOH . G 4 HOH A 138 638 126 HOH HOH . G 4 HOH A 139 639 7 HOH HOH . G 4 HOH A 140 640 304 HOH HOH . G 4 HOH A 141 641 282 HOH HOH . G 4 HOH A 142 642 288 HOH HOH . G 4 HOH A 143 643 58 HOH HOH . G 4 HOH A 144 644 106 HOH HOH . G 4 HOH A 145 645 238 HOH HOH . G 4 HOH A 146 646 2 HOH HOH . G 4 HOH A 147 647 291 HOH HOH . G 4 HOH A 148 648 87 HOH HOH . G 4 HOH A 149 649 150 HOH HOH . G 4 HOH A 150 650 157 HOH HOH . G 4 HOH A 151 651 96 HOH HOH . G 4 HOH A 152 652 279 HOH HOH . G 4 HOH A 153 653 93 HOH HOH . G 4 HOH A 154 654 169 HOH HOH . G 4 HOH A 155 655 200 HOH HOH . G 4 HOH A 156 656 99 HOH HOH . G 4 HOH A 157 657 70 HOH HOH . G 4 HOH A 158 658 219 HOH HOH . G 4 HOH A 159 659 95 HOH HOH . G 4 HOH A 160 660 56 HOH HOH . G 4 HOH A 161 661 45 HOH HOH . G 4 HOH A 162 662 198 HOH HOH . G 4 HOH A 163 663 122 HOH HOH . G 4 HOH A 164 664 47 HOH HOH . G 4 HOH A 165 665 32 HOH HOH . G 4 HOH A 166 666 38 HOH HOH . G 4 HOH A 167 667 74 HOH HOH . G 4 HOH A 168 668 296 HOH HOH . G 4 HOH A 169 669 139 HOH HOH . G 4 HOH A 170 670 13 HOH HOH . G 4 HOH A 171 671 8 HOH HOH . G 4 HOH A 172 672 301 HOH HOH . G 4 HOH A 173 673 268 HOH HOH . G 4 HOH A 174 674 308 HOH HOH . G 4 HOH A 175 675 251 HOH HOH . G 4 HOH A 176 676 180 HOH HOH . G 4 HOH A 177 677 172 HOH HOH . G 4 HOH A 178 678 285 HOH HOH . G 4 HOH A 179 679 160 HOH HOH . G 4 HOH A 180 680 107 HOH HOH . G 4 HOH A 181 681 80 HOH HOH . G 4 HOH A 182 682 100 HOH HOH . G 4 HOH A 183 683 292 HOH HOH . G 4 HOH A 184 684 50 HOH HOH . G 4 HOH A 185 685 265 HOH HOH . G 4 HOH A 186 686 153 HOH HOH . G 4 HOH A 187 687 46 HOH HOH . G 4 HOH A 188 688 223 HOH HOH . G 4 HOH A 189 689 91 HOH HOH . G 4 HOH A 190 690 310 HOH HOH . G 4 HOH A 191 691 234 HOH HOH . G 4 HOH A 192 692 297 HOH HOH . G 4 HOH A 193 693 63 HOH HOH . G 4 HOH A 194 694 22 HOH HOH . G 4 HOH A 195 695 197 HOH HOH . G 4 HOH A 196 696 94 HOH HOH . G 4 HOH A 197 697 23 HOH HOH . G 4 HOH A 198 698 294 HOH HOH . G 4 HOH A 199 699 283 HOH HOH . G 4 HOH A 200 700 237 HOH HOH . G 4 HOH A 201 701 261 HOH HOH . G 4 HOH A 202 702 319 HOH HOH . G 4 HOH A 203 703 136 HOH HOH . G 4 HOH A 204 704 213 HOH HOH . G 4 HOH A 205 705 131 HOH HOH . G 4 HOH A 206 706 286 HOH HOH . G 4 HOH A 207 707 262 HOH HOH . G 4 HOH A 208 708 290 HOH HOH . G 4 HOH A 209 709 49 HOH HOH . G 4 HOH A 210 710 190 HOH HOH . G 4 HOH A 211 711 228 HOH HOH . G 4 HOH A 212 712 113 HOH HOH . G 4 HOH A 213 713 274 HOH HOH . G 4 HOH A 214 714 120 HOH HOH . G 4 HOH A 215 715 284 HOH HOH . G 4 HOH A 216 716 302 HOH HOH . G 4 HOH A 217 717 203 HOH HOH . G 4 HOH A 218 718 188 HOH HOH . G 4 HOH A 219 719 326 HOH HOH . G 4 HOH A 220 720 201 HOH HOH . G 4 HOH A 221 721 244 HOH HOH . G 4 HOH A 222 722 327 HOH HOH . G 4 HOH A 223 723 330 HOH HOH . G 4 HOH A 224 724 278 HOH HOH . G 4 HOH A 225 725 324 HOH HOH . G 4 HOH A 226 726 216 HOH HOH . G 4 HOH A 227 727 151 HOH HOH . G 4 HOH A 228 728 221 HOH HOH . G 4 HOH A 229 729 220 HOH HOH . G 4 HOH A 230 730 191 HOH HOH . G 4 HOH A 231 731 215 HOH HOH . G 4 HOH A 232 732 277 HOH HOH . G 4 HOH A 233 733 254 HOH HOH . G 4 HOH A 234 734 232 HOH HOH . G 4 HOH A 235 735 227 HOH HOH . G 4 HOH A 236 736 196 HOH HOH . G 4 HOH A 237 737 235 HOH HOH . G 4 HOH A 238 738 164 HOH HOH . G 4 HOH A 239 739 183 HOH HOH . G 4 HOH A 240 740 253 HOH HOH . G 4 HOH A 241 741 187 HOH HOH . G 4 HOH A 242 742 231 HOH HOH . G 4 HOH A 243 743 116 HOH HOH . G 4 HOH A 244 744 154 HOH HOH . G 4 HOH A 245 745 105 HOH HOH . G 4 HOH A 246 746 159 HOH HOH . G 4 HOH A 247 747 280 HOH HOH . G 4 HOH A 248 748 171 HOH HOH . G 4 HOH A 249 749 199 HOH HOH . G 4 HOH A 250 750 137 HOH HOH . G 4 HOH A 251 751 259 HOH HOH . G 4 HOH A 252 752 229 HOH HOH . G 4 HOH A 253 753 230 HOH HOH . G 4 HOH A 254 754 73 HOH HOH . G 4 HOH A 255 755 118 HOH HOH . G 4 HOH A 256 756 185 HOH HOH . G 4 HOH A 257 757 266 HOH HOH . G 4 HOH A 258 758 313 HOH HOH . G 4 HOH A 259 759 145 HOH HOH . G 4 HOH A 260 760 89 HOH HOH . G 4 HOH A 261 761 48 HOH HOH . G 4 HOH A 262 762 189 HOH HOH . G 4 HOH A 263 763 146 HOH HOH . G 4 HOH A 264 764 315 HOH HOH . G 4 HOH A 265 765 69 HOH HOH . G 4 HOH A 266 766 309 HOH HOH . G 4 HOH A 267 767 40 HOH HOH . G 4 HOH A 268 768 194 HOH HOH . G 4 HOH A 269 769 127 HOH HOH . G 4 HOH A 270 770 212 HOH HOH . G 4 HOH A 271 771 263 HOH HOH . G 4 HOH A 272 772 132 HOH HOH . G 4 HOH A 273 773 193 HOH HOH . G 4 HOH A 274 774 226 HOH HOH . G 4 HOH A 275 775 174 HOH HOH . G 4 HOH A 276 776 312 HOH HOH . G 4 HOH A 277 777 258 HOH HOH . G 4 HOH A 278 778 316 HOH HOH . G 4 HOH A 279 779 195 HOH HOH . G 4 HOH A 280 780 97 HOH HOH . G 4 HOH A 281 781 311 HOH HOH . G 4 HOH A 282 782 256 HOH HOH . G 4 HOH A 283 783 318 HOH HOH . G 4 HOH A 284 784 245 HOH HOH . G 4 HOH A 285 785 317 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . B 2 7.7 -28.295 21.019 1 29.3 ? S DMS 401 A 1 HETATM 2 O O DMS . . . B 2 8.238 -27.334 21.952 1 28.8 ? O DMS 401 A 1 HETATM 3 C C1 DMS . . . B 2 6.396 -29.13 21.924 1 29.14 ? C1 DMS 401 A 1 HETATM 4 C C2 DMS . . . B 2 6.683 -27.398 19.892 1 28.95 ? C2 DMS 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #