data_7GDJ # _model_server_result.job_id jYpfBkJXAeyA2QaHp8GPpA _model_server_result.datetime_utc '2024-11-21 08:38:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gdj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 7GDJ # _exptl.entry_id 7GDJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 261.707 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(3-chlorophenyl)-N-(5-methylpyridazin-4-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.88 _cell.angle_gamma 90 _cell.entry_id 7GDJ _cell.length_a 114.307 _cell.length_b 53.604 _cell.length_c 44.321 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GDJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H12 Cl N3 O' _chem_comp.formula_weight 261.707 _chem_comp.id M50 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(3-chlorophenyl)-N-(5-methylpyridazin-4-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N M50 doub 227 n y N1 C3 M50 sing 228 n y N C2 M50 sing 229 n y C3 C4 M50 doub 230 n y C2 C1 M50 doub 231 n y C4 C1 M50 sing 232 n y C4 N2 M50 sing 233 n n C1 C M50 sing 234 n n O C5 M50 doub 235 n n N2 C5 M50 sing 236 n n CL C11 M50 sing 237 n n C5 C6 M50 sing 238 n n C12 C11 M50 doub 239 n y C12 C7 M50 sing 240 n y C11 C10 M50 sing 241 n y C6 C7 M50 sing 242 n n C7 C8 M50 doub 243 n y C10 C9 M50 doub 244 n y C8 C9 M50 sing 245 n y C6 H1 M50 sing 246 n n C6 H2 M50 sing 247 n n C8 H3 M50 sing 248 n n C10 H4 M50 sing 249 n n C9 H5 M50 sing 250 n n C12 H6 M50 sing 251 n n N2 H7 M50 sing 252 n n C H8 M50 sing 253 n n C H9 M50 sing 254 n n C H10 M50 sing 255 n n C3 H11 M50 sing 256 n n C2 H12 M50 sing 257 n n # _atom_sites.entry_id 7GDJ _atom_sites.fract_transf_matrix[1][1] 0.008748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001682 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 3 M50 A 1 404 1101 M50 LIG . F 4 HOH A 1 501 218 HOH HOH . F 4 HOH A 2 502 33 HOH HOH . F 4 HOH A 3 503 94 HOH HOH . F 4 HOH A 4 504 9 HOH HOH . F 4 HOH A 5 505 28 HOH HOH . F 4 HOH A 6 506 132 HOH HOH . F 4 HOH A 7 507 194 HOH HOH . F 4 HOH A 8 508 195 HOH HOH . F 4 HOH A 9 509 119 HOH HOH . F 4 HOH A 10 510 104 HOH HOH . F 4 HOH A 11 511 158 HOH HOH . F 4 HOH A 12 512 154 HOH HOH . F 4 HOH A 13 513 13 HOH HOH . F 4 HOH A 14 514 200 HOH HOH . F 4 HOH A 15 515 34 HOH HOH . F 4 HOH A 16 516 41 HOH HOH . F 4 HOH A 17 517 30 HOH HOH . F 4 HOH A 18 518 181 HOH HOH . F 4 HOH A 19 519 79 HOH HOH . F 4 HOH A 20 520 121 HOH HOH . F 4 HOH A 21 521 10 HOH HOH . F 4 HOH A 22 522 81 HOH HOH . F 4 HOH A 23 523 120 HOH HOH . F 4 HOH A 24 524 39 HOH HOH . F 4 HOH A 25 525 36 HOH HOH . F 4 HOH A 26 526 99 HOH HOH . F 4 HOH A 27 527 6 HOH HOH . F 4 HOH A 28 528 75 HOH HOH . F 4 HOH A 29 529 20 HOH HOH . F 4 HOH A 30 530 97 HOH HOH . F 4 HOH A 31 531 147 HOH HOH . F 4 HOH A 32 532 52 HOH HOH . F 4 HOH A 33 533 125 HOH HOH . F 4 HOH A 34 534 58 HOH HOH . F 4 HOH A 35 535 133 HOH HOH . F 4 HOH A 36 536 12 HOH HOH . F 4 HOH A 37 537 117 HOH HOH . F 4 HOH A 38 538 59 HOH HOH . F 4 HOH A 39 539 24 HOH HOH . F 4 HOH A 40 540 61 HOH HOH . F 4 HOH A 41 541 88 HOH HOH . F 4 HOH A 42 542 68 HOH HOH . F 4 HOH A 43 543 77 HOH HOH . F 4 HOH A 44 544 156 HOH HOH . F 4 HOH A 45 545 197 HOH HOH . F 4 HOH A 46 546 64 HOH HOH . F 4 HOH A 47 547 62 HOH HOH . F 4 HOH A 48 548 176 HOH HOH . F 4 HOH A 49 549 145 HOH HOH . F 4 HOH A 50 550 84 HOH HOH . F 4 HOH A 51 551 49 HOH HOH . F 4 HOH A 52 552 230 HOH HOH . F 4 HOH A 53 553 219 HOH HOH . F 4 HOH A 54 554 105 HOH HOH . F 4 HOH A 55 555 48 HOH HOH . F 4 HOH A 56 556 206 HOH HOH . F 4 HOH A 57 557 180 HOH HOH . F 4 HOH A 58 558 123 HOH HOH . F 4 HOH A 59 559 26 HOH HOH . F 4 HOH A 60 560 7 HOH HOH . F 4 HOH A 61 561 213 HOH HOH . F 4 HOH A 62 562 72 HOH HOH . F 4 HOH A 63 563 174 HOH HOH . F 4 HOH A 64 564 115 HOH HOH . F 4 HOH A 65 565 67 HOH HOH . F 4 HOH A 66 566 35 HOH HOH . F 4 HOH A 67 567 217 HOH HOH . F 4 HOH A 68 568 103 HOH HOH . F 4 HOH A 69 569 40 HOH HOH . F 4 HOH A 70 570 56 HOH HOH . F 4 HOH A 71 571 18 HOH HOH . F 4 HOH A 72 572 71 HOH HOH . F 4 HOH A 73 573 131 HOH HOH . F 4 HOH A 74 574 32 HOH HOH . F 4 HOH A 75 575 73 HOH HOH . F 4 HOH A 76 576 210 HOH HOH . F 4 HOH A 77 577 98 HOH HOH . F 4 HOH A 78 578 15 HOH HOH . F 4 HOH A 79 579 63 HOH HOH . F 4 HOH A 80 580 4 HOH HOH . F 4 HOH A 81 581 3 HOH HOH . F 4 HOH A 82 582 146 HOH HOH . F 4 HOH A 83 583 116 HOH HOH . F 4 HOH A 84 584 109 HOH HOH . F 4 HOH A 85 585 14 HOH HOH . F 4 HOH A 86 586 152 HOH HOH . F 4 HOH A 87 587 11 HOH HOH . F 4 HOH A 88 588 140 HOH HOH . F 4 HOH A 89 589 21 HOH HOH . F 4 HOH A 90 590 106 HOH HOH . F 4 HOH A 91 591 5 HOH HOH . F 4 HOH A 92 592 183 HOH HOH . F 4 HOH A 93 593 80 HOH HOH . F 4 HOH A 94 594 60 HOH HOH . F 4 HOH A 95 595 29 HOH HOH . F 4 HOH A 96 596 141 HOH HOH . F 4 HOH A 97 597 74 HOH HOH . F 4 HOH A 98 598 1 HOH HOH . F 4 HOH A 99 599 108 HOH HOH . F 4 HOH A 100 600 54 HOH HOH . F 4 HOH A 101 601 113 HOH HOH . F 4 HOH A 102 602 25 HOH HOH . F 4 HOH A 103 603 189 HOH HOH . F 4 HOH A 104 604 51 HOH HOH . F 4 HOH A 105 605 202 HOH HOH . F 4 HOH A 106 606 228 HOH HOH . F 4 HOH A 107 607 144 HOH HOH . F 4 HOH A 108 608 87 HOH HOH . F 4 HOH A 109 609 91 HOH HOH . F 4 HOH A 110 610 169 HOH HOH . F 4 HOH A 111 611 129 HOH HOH . F 4 HOH A 112 612 225 HOH HOH . F 4 HOH A 113 613 179 HOH HOH . F 4 HOH A 114 614 17 HOH HOH . F 4 HOH A 115 615 89 HOH HOH . F 4 HOH A 116 616 38 HOH HOH . F 4 HOH A 117 617 151 HOH HOH . F 4 HOH A 118 618 2 HOH HOH . F 4 HOH A 119 619 27 HOH HOH . F 4 HOH A 120 620 44 HOH HOH . F 4 HOH A 121 621 95 HOH HOH . F 4 HOH A 122 622 102 HOH HOH . F 4 HOH A 123 623 76 HOH HOH . F 4 HOH A 124 624 101 HOH HOH . F 4 HOH A 125 625 172 HOH HOH . F 4 HOH A 126 626 70 HOH HOH . F 4 HOH A 127 627 137 HOH HOH . F 4 HOH A 128 628 50 HOH HOH . F 4 HOH A 129 629 138 HOH HOH . F 4 HOH A 130 630 175 HOH HOH . F 4 HOH A 131 631 78 HOH HOH . F 4 HOH A 132 632 86 HOH HOH . F 4 HOH A 133 633 55 HOH HOH . F 4 HOH A 134 634 185 HOH HOH . F 4 HOH A 135 635 224 HOH HOH . F 4 HOH A 136 636 182 HOH HOH . F 4 HOH A 137 637 53 HOH HOH . F 4 HOH A 138 638 31 HOH HOH . F 4 HOH A 139 639 96 HOH HOH . F 4 HOH A 140 640 8 HOH HOH . F 4 HOH A 141 641 57 HOH HOH . F 4 HOH A 142 642 168 HOH HOH . F 4 HOH A 143 643 209 HOH HOH . F 4 HOH A 144 644 148 HOH HOH . F 4 HOH A 145 645 83 HOH HOH . F 4 HOH A 146 646 170 HOH HOH . F 4 HOH A 147 647 187 HOH HOH . F 4 HOH A 148 648 134 HOH HOH . F 4 HOH A 149 649 130 HOH HOH . F 4 HOH A 150 650 23 HOH HOH . F 4 HOH A 151 651 47 HOH HOH . F 4 HOH A 152 652 19 HOH HOH . F 4 HOH A 153 653 196 HOH HOH . F 4 HOH A 154 654 92 HOH HOH . F 4 HOH A 155 655 184 HOH HOH . F 4 HOH A 156 656 66 HOH HOH . F 4 HOH A 157 657 126 HOH HOH . F 4 HOH A 158 658 177 HOH HOH . F 4 HOH A 159 659 211 HOH HOH . F 4 HOH A 160 660 201 HOH HOH . F 4 HOH A 161 661 43 HOH HOH . F 4 HOH A 162 662 142 HOH HOH . F 4 HOH A 163 663 161 HOH HOH . F 4 HOH A 164 664 122 HOH HOH . F 4 HOH A 165 665 128 HOH HOH . F 4 HOH A 166 666 16 HOH HOH . F 4 HOH A 167 667 42 HOH HOH . F 4 HOH A 168 668 227 HOH HOH . F 4 HOH A 169 669 203 HOH HOH . F 4 HOH A 170 670 22 HOH HOH . F 4 HOH A 171 671 214 HOH HOH . F 4 HOH A 172 672 159 HOH HOH . F 4 HOH A 173 673 112 HOH HOH . F 4 HOH A 174 674 82 HOH HOH . F 4 HOH A 175 675 216 HOH HOH . F 4 HOH A 176 676 107 HOH HOH . F 4 HOH A 177 677 90 HOH HOH . F 4 HOH A 178 678 111 HOH HOH . F 4 HOH A 179 679 46 HOH HOH . F 4 HOH A 180 680 114 HOH HOH . F 4 HOH A 181 681 149 HOH HOH . F 4 HOH A 182 682 223 HOH HOH . F 4 HOH A 183 683 155 HOH HOH . F 4 HOH A 184 684 171 HOH HOH . F 4 HOH A 185 685 193 HOH HOH . F 4 HOH A 186 686 222 HOH HOH . F 4 HOH A 187 687 220 HOH HOH . F 4 HOH A 188 688 198 HOH HOH . F 4 HOH A 189 689 192 HOH HOH . F 4 HOH A 190 690 173 HOH HOH . F 4 HOH A 191 691 127 HOH HOH . F 4 HOH A 192 692 205 HOH HOH . F 4 HOH A 193 693 162 HOH HOH . F 4 HOH A 194 694 188 HOH HOH . F 4 HOH A 195 695 191 HOH HOH . F 4 HOH A 196 696 139 HOH HOH . F 4 HOH A 197 697 215 HOH HOH . F 4 HOH A 198 698 69 HOH HOH . F 4 HOH A 199 699 164 HOH HOH . F 4 HOH A 200 700 212 HOH HOH . F 4 HOH A 201 701 167 HOH HOH . F 4 HOH A 202 702 45 HOH HOH . F 4 HOH A 203 703 190 HOH HOH . F 4 HOH A 204 704 110 HOH HOH . F 4 HOH A 205 705 100 HOH HOH . F 4 HOH A 206 706 143 HOH HOH . F 4 HOH A 207 707 204 HOH HOH . F 4 HOH A 208 708 150 HOH HOH . F 4 HOH A 209 709 208 HOH HOH . F 4 HOH A 210 710 118 HOH HOH . F 4 HOH A 211 711 160 HOH HOH . F 4 HOH A 212 712 85 HOH HOH . F 4 HOH A 213 713 186 HOH HOH . F 4 HOH A 214 714 37 HOH HOH . F 4 HOH A 215 715 157 HOH HOH . F 4 HOH A 216 716 136 HOH HOH . F 4 HOH A 217 717 153 HOH HOH . F 4 HOH A 218 718 178 HOH HOH . F 4 HOH A 219 719 165 HOH HOH . F 4 HOH A 220 720 135 HOH HOH . F 4 HOH A 221 721 65 HOH HOH . F 4 HOH A 222 722 229 HOH HOH . F 4 HOH A 223 723 124 HOH HOH . F 4 HOH A 224 724 207 HOH HOH . F 4 HOH A 225 725 166 HOH HOH . F 4 HOH A 226 726 93 HOH HOH . F 4 HOH A 227 727 221 HOH HOH . F 4 HOH A 228 728 199 HOH HOH . F 4 HOH A 229 729 226 HOH HOH . F 4 HOH A 230 730 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 M50 . . . E 3 7.071 0.572 17.279 1 29.61 ? N1 M50 404 A 1 HETATM 2 C C4 M50 . . . E 3 7.412 0.108 19.603 1 29.64 ? C4 M50 404 A 1 HETATM 3 C C5 M50 . . . E 3 9.364 -0.253 21.076 1 29.47 ? C5 M50 404 A 1 HETATM 4 C C6 M50 . . . E 3 9.871 -1.135 22.201 1 29.89 ? C6 M50 404 A 1 HETATM 5 C C7 M50 . . . E 3 11.349 -0.902 22.432 1 30.32 ? C7 M50 404 A 1 HETATM 6 C C8 M50 . . . E 3 11.786 -0.036 23.426 1 30.3 ? C8 M50 404 A 1 HETATM 7 C C10 M50 . . . E 3 14.052 -0.208 22.635 1 30.45 ? C10 M50 404 A 1 HETATM 8 CL CL M50 . . . E 3 14.794 -1.898 20.66 1 30.81 ? CL M50 404 A 1 HETATM 9 C C11 M50 . . . E 3 13.621 -1.111 21.686 1 30.52 ? C11 M50 404 A 1 HETATM 10 C C9 M50 . . . E 3 13.124 0.314 23.526 1 30.53 ? C9 M50 404 A 1 HETATM 11 C C12 M50 . . . E 3 12.288 -1.461 21.568 1 30.32 ? C12 M50 404 A 1 HETATM 12 O O M50 . . . E 3 10.049 0.654 20.61 1 28.93 ? O M50 404 A 1 HETATM 13 N N2 M50 . . . E 3 8.118 -0.544 20.645 1 29.55 ? N2 M50 404 A 1 HETATM 14 C C1 M50 . . . E 3 6.295 0.913 19.903 1 29.69 ? C1 M50 404 A 1 HETATM 15 C C M50 . . . E 3 5.862 1.177 21.322 1 30.06 ? C M50 404 A 1 HETATM 16 C C3 M50 . . . E 3 7.746 -0.009 18.256 1 29.41 ? C3 M50 404 A 1 HETATM 17 N N M50 . . . E 3 5.98 1.341 17.575 1 29.66 ? N M50 404 A 1 HETATM 18 C C2 M50 . . . E 3 5.612 1.498 18.842 1 29.81 ? C2 M50 404 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #