data_7GDZ # _model_server_result.job_id WTVKiQ0t0lKmkI-9zC2PAw _model_server_result.datetime_utc '2024-11-21 08:50:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gdz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 7GDZ # _exptl.entry_id 7GDZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.745 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(3-chloro-5-methoxyphenyl)-N-(4-methylpyridin-3-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.58 _cell.angle_gamma 90 _cell.entry_id 7GDZ _cell.length_a 112.818 _cell.length_b 53.288 _cell.length_c 45.02 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GDZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H15 Cl N2 O2' _chem_comp.formula_weight 290.745 _chem_comp.id N3I _chem_comp.mon_nstd_flag . _chem_comp.name 2-(3-chloro-5-methoxyphenyl)-N-(4-methylpyridin-3-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C10 N3I doub 246 n y N1 C9 N3I sing 247 n y C10 C11 N3I sing 248 n y C9 C8 N3I doub 249 n y C11 C12 N3I doub 250 n y C8 C12 N3I sing 251 n y C8 N N3I sing 252 n n C12 C13 N3I sing 253 n n N C7 N3I sing 254 n n O1 C7 N3I doub 255 n n C7 C6 N3I sing 256 n n CL C3 N3I sing 257 n n C6 C5 N3I sing 258 n n C4 C3 N3I doub 259 n y C4 C5 N3I sing 260 n y C3 C2 N3I sing 261 n y C5 C14 N3I doub 262 n y C2 C1 N3I doub 263 n y C14 C1 N3I sing 264 n y C1 O N3I sing 265 n n O C N3I sing 266 n n C4 H1 N3I sing 267 n n C6 H2 N3I sing 268 n n C6 H3 N3I sing 269 n n C10 H4 N3I sing 270 n n C13 H5 N3I sing 271 n n C13 H6 N3I sing 272 n n C13 H7 N3I sing 273 n n C2 H8 N3I sing 274 n n C14 H9 N3I sing 275 n n C H10 N3I sing 276 n n C H11 N3I sing 277 n n C H12 N3I sing 278 n n N H13 N3I sing 279 n n C11 H14 N3I sing 280 n n C9 H15 N3I sing 281 n n # _atom_sites.entry_id 7GDZ _atom_sites.fract_transf_matrix[1][1] 0.008864 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001816 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018766 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022674 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 3 N3I A 1 404 1101 N3I LIG . F 4 HOH A 1 501 96 HOH HOH . F 4 HOH A 2 502 146 HOH HOH . F 4 HOH A 3 503 98 HOH HOH . F 4 HOH A 4 504 166 HOH HOH . F 4 HOH A 5 505 64 HOH HOH . F 4 HOH A 6 506 1 HOH HOH . F 4 HOH A 7 507 92 HOH HOH . F 4 HOH A 8 508 159 HOH HOH . F 4 HOH A 9 509 4 HOH HOH . F 4 HOH A 10 510 95 HOH HOH . F 4 HOH A 11 511 23 HOH HOH . F 4 HOH A 12 512 60 HOH HOH . F 4 HOH A 13 513 32 HOH HOH . F 4 HOH A 14 514 147 HOH HOH . F 4 HOH A 15 515 149 HOH HOH . F 4 HOH A 16 516 47 HOH HOH . F 4 HOH A 17 517 58 HOH HOH . F 4 HOH A 18 518 57 HOH HOH . F 4 HOH A 19 519 33 HOH HOH . F 4 HOH A 20 520 37 HOH HOH . F 4 HOH A 21 521 35 HOH HOH . F 4 HOH A 22 522 112 HOH HOH . F 4 HOH A 23 523 56 HOH HOH . F 4 HOH A 24 524 6 HOH HOH . F 4 HOH A 25 525 30 HOH HOH . F 4 HOH A 26 526 83 HOH HOH . F 4 HOH A 27 527 122 HOH HOH . F 4 HOH A 28 528 67 HOH HOH . F 4 HOH A 29 529 28 HOH HOH . F 4 HOH A 30 530 86 HOH HOH . F 4 HOH A 31 531 73 HOH HOH . F 4 HOH A 32 532 9 HOH HOH . F 4 HOH A 33 533 25 HOH HOH . F 4 HOH A 34 534 50 HOH HOH . F 4 HOH A 35 535 26 HOH HOH . F 4 HOH A 36 536 128 HOH HOH . F 4 HOH A 37 537 63 HOH HOH . F 4 HOH A 38 538 38 HOH HOH . F 4 HOH A 39 539 91 HOH HOH . F 4 HOH A 40 540 165 HOH HOH . F 4 HOH A 41 541 80 HOH HOH . F 4 HOH A 42 542 121 HOH HOH . F 4 HOH A 43 543 24 HOH HOH . F 4 HOH A 44 544 29 HOH HOH . F 4 HOH A 45 545 116 HOH HOH . F 4 HOH A 46 546 160 HOH HOH . F 4 HOH A 47 547 104 HOH HOH . F 4 HOH A 48 548 3 HOH HOH . F 4 HOH A 49 549 88 HOH HOH . F 4 HOH A 50 550 156 HOH HOH . F 4 HOH A 51 551 118 HOH HOH . F 4 HOH A 52 552 70 HOH HOH . F 4 HOH A 53 553 117 HOH HOH . F 4 HOH A 54 554 39 HOH HOH . F 4 HOH A 55 555 76 HOH HOH . F 4 HOH A 56 556 79 HOH HOH . F 4 HOH A 57 557 10 HOH HOH . F 4 HOH A 58 558 19 HOH HOH . F 4 HOH A 59 559 11 HOH HOH . F 4 HOH A 60 560 162 HOH HOH . F 4 HOH A 61 561 68 HOH HOH . F 4 HOH A 62 562 84 HOH HOH . F 4 HOH A 63 563 20 HOH HOH . F 4 HOH A 64 564 5 HOH HOH . F 4 HOH A 65 565 14 HOH HOH . F 4 HOH A 66 566 55 HOH HOH . F 4 HOH A 67 567 99 HOH HOH . F 4 HOH A 68 568 78 HOH HOH . F 4 HOH A 69 569 107 HOH HOH . F 4 HOH A 70 570 129 HOH HOH . F 4 HOH A 71 571 12 HOH HOH . F 4 HOH A 72 572 49 HOH HOH . F 4 HOH A 73 573 123 HOH HOH . F 4 HOH A 74 574 142 HOH HOH . F 4 HOH A 75 575 74 HOH HOH . F 4 HOH A 76 576 34 HOH HOH . F 4 HOH A 77 577 52 HOH HOH . F 4 HOH A 78 578 17 HOH HOH . F 4 HOH A 79 579 77 HOH HOH . F 4 HOH A 80 580 154 HOH HOH . F 4 HOH A 81 581 90 HOH HOH . F 4 HOH A 82 582 53 HOH HOH . F 4 HOH A 83 583 137 HOH HOH . F 4 HOH A 84 584 131 HOH HOH . F 4 HOH A 85 585 27 HOH HOH . F 4 HOH A 86 586 148 HOH HOH . F 4 HOH A 87 587 2 HOH HOH . F 4 HOH A 88 588 150 HOH HOH . F 4 HOH A 89 589 85 HOH HOH . F 4 HOH A 90 590 31 HOH HOH . F 4 HOH A 91 591 124 HOH HOH . F 4 HOH A 92 592 16 HOH HOH . F 4 HOH A 93 593 113 HOH HOH . F 4 HOH A 94 594 41 HOH HOH . F 4 HOH A 95 595 163 HOH HOH . F 4 HOH A 96 596 18 HOH HOH . F 4 HOH A 97 597 143 HOH HOH . F 4 HOH A 98 598 139 HOH HOH . F 4 HOH A 99 599 7 HOH HOH . F 4 HOH A 100 600 89 HOH HOH . F 4 HOH A 101 601 125 HOH HOH . F 4 HOH A 102 602 71 HOH HOH . F 4 HOH A 103 603 75 HOH HOH . F 4 HOH A 104 604 62 HOH HOH . F 4 HOH A 105 605 97 HOH HOH . F 4 HOH A 106 606 8 HOH HOH . F 4 HOH A 107 607 21 HOH HOH . F 4 HOH A 108 608 82 HOH HOH . F 4 HOH A 109 609 69 HOH HOH . F 4 HOH A 110 610 144 HOH HOH . F 4 HOH A 111 611 51 HOH HOH . F 4 HOH A 112 612 54 HOH HOH . F 4 HOH A 113 613 42 HOH HOH . F 4 HOH A 114 614 72 HOH HOH . F 4 HOH A 115 615 170 HOH HOH . F 4 HOH A 116 616 15 HOH HOH . F 4 HOH A 117 617 66 HOH HOH . F 4 HOH A 118 618 13 HOH HOH . F 4 HOH A 119 619 103 HOH HOH . F 4 HOH A 120 620 105 HOH HOH . F 4 HOH A 121 621 45 HOH HOH . F 4 HOH A 122 622 110 HOH HOH . F 4 HOH A 123 623 140 HOH HOH . F 4 HOH A 124 624 106 HOH HOH . F 4 HOH A 125 625 59 HOH HOH . F 4 HOH A 126 626 119 HOH HOH . F 4 HOH A 127 627 111 HOH HOH . F 4 HOH A 128 628 46 HOH HOH . F 4 HOH A 129 629 22 HOH HOH . F 4 HOH A 130 630 120 HOH HOH . F 4 HOH A 131 631 48 HOH HOH . F 4 HOH A 132 632 168 HOH HOH . F 4 HOH A 133 633 101 HOH HOH . F 4 HOH A 134 634 40 HOH HOH . F 4 HOH A 135 635 44 HOH HOH . F 4 HOH A 136 636 127 HOH HOH . F 4 HOH A 137 637 134 HOH HOH . F 4 HOH A 138 638 108 HOH HOH . F 4 HOH A 139 639 94 HOH HOH . F 4 HOH A 140 640 155 HOH HOH . F 4 HOH A 141 641 136 HOH HOH . F 4 HOH A 142 642 152 HOH HOH . F 4 HOH A 143 643 141 HOH HOH . F 4 HOH A 144 644 169 HOH HOH . F 4 HOH A 145 645 151 HOH HOH . F 4 HOH A 146 646 167 HOH HOH . F 4 HOH A 147 647 135 HOH HOH . F 4 HOH A 148 648 65 HOH HOH . F 4 HOH A 149 649 161 HOH HOH . F 4 HOH A 150 650 100 HOH HOH . F 4 HOH A 151 651 126 HOH HOH . F 4 HOH A 152 652 145 HOH HOH . F 4 HOH A 153 653 164 HOH HOH . F 4 HOH A 154 654 157 HOH HOH . F 4 HOH A 155 655 109 HOH HOH . F 4 HOH A 156 656 132 HOH HOH . F 4 HOH A 157 657 93 HOH HOH . F 4 HOH A 158 658 81 HOH HOH . F 4 HOH A 159 659 153 HOH HOH . F 4 HOH A 160 660 43 HOH HOH . F 4 HOH A 161 661 138 HOH HOH . F 4 HOH A 162 662 115 HOH HOH . F 4 HOH A 163 663 114 HOH HOH . F 4 HOH A 164 664 102 HOH HOH . F 4 HOH A 165 665 36 HOH HOH . F 4 HOH A 166 666 130 HOH HOH . F 4 HOH A 167 667 61 HOH HOH . F 4 HOH A 168 668 133 HOH HOH . F 4 HOH A 169 669 87 HOH HOH . F 4 HOH A 170 670 158 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 N3I . . . E 3 6.572 0.801 17.239 1 40.18 ? N1 N3I 404 A 1 HETATM 2 C C4 N3I . . . E 3 11.414 -1.399 22.031 1 46.38 ? C4 N3I 404 A 1 HETATM 3 C C5 N3I . . . E 3 10.201 -1.095 22.635 1 45.27 ? C5 N3I 404 A 1 HETATM 4 C C6 N3I . . . E 3 8.912 -1.584 22.028 1 43.74 ? C6 N3I 404 A 1 HETATM 5 C C7 N3I . . . E 3 8.437 -0.549 21.032 1 42.1 ? C7 N3I 404 A 1 HETATM 6 C C8 N3I . . . E 3 6.632 -0.038 19.486 1 40.42 ? C8 N3I 404 A 1 HETATM 7 C C10 N3I . . . E 3 5.524 1.559 17.591 1 39.88 ? C10 N3I 404 A 1 HETATM 8 C C13 N3I . . . E 3 5.056 0.862 21.277 1 40.08 ? C13 N3I 404 A 1 HETATM 9 O O1 N3I . . . E 3 9.07 0.483 20.816 1 41.47 ? O1 N3I 404 A 1 HETATM 10 C C3 N3I . . . E 3 12.582 -0.907 22.567 1 47.32 ? C3 N3I 404 A 1 HETATM 11 CL CL N3I . . . E 3 14.096 -1.357 21.839 1 48.63 ? CL N3I 404 A 1 HETATM 12 C C2 N3I . . . E 3 12.588 -0.108 23.693 1 46.94 ? C2 N3I 404 A 1 HETATM 13 C C14 N3I . . . E 3 10.184 -0.307 23.78 1 45.76 ? C14 N3I 404 A 1 HETATM 14 C C1 N3I . . . E 3 11.377 0.166 24.308 1 46.46 ? C1 N3I 404 A 1 HETATM 15 O O N3I . . . E 3 11.507 0.813 25.51 1 46.92 ? O N3I 404 A 1 HETATM 16 C C N3I . . . E 3 10.345 0.972 26.33 1 46.98 ? C N3I 404 A 1 HETATM 17 N N N3I . . . E 3 7.26 -0.845 20.45 1 41.19 ? N N3I 404 A 1 HETATM 18 C C12 N3I . . . E 3 5.547 0.777 19.854 1 40.18 ? C12 N3I 404 A 1 HETATM 19 C C11 N3I . . . E 3 4.987 1.575 18.862 1 40.04 ? C11 N3I 404 A 1 HETATM 20 C C9 N3I . . . E 3 7.106 0.01 18.176 1 39.81 ? C9 N3I 404 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #