data_7GF1 # _model_server_result.job_id biTGqVwLuigXQ-JLlfj8bg _model_server_result.datetime_utc '2024-11-21 11:24:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gf1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7GF1 # _exptl.entry_id 7GF1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.55 _cell.angle_gamma 90 _cell.entry_id 7GF1 _cell.length_a 113.738 _cell.length_b 53.453 _cell.length_c 44.584 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GF1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GF1 _atom_sites.fract_transf_matrix[1][1] 0.008792 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001797 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022893 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 3 O0R A 1 404 1101 O0R LIG . F 4 HOH A 1 501 122 HOH HOH . F 4 HOH A 2 502 190 HOH HOH . F 4 HOH A 3 503 101 HOH HOH . F 4 HOH A 4 504 29 HOH HOH . F 4 HOH A 5 505 10 HOH HOH . F 4 HOH A 6 506 261 HOH HOH . F 4 HOH A 7 507 210 HOH HOH . F 4 HOH A 8 508 151 HOH HOH . F 4 HOH A 9 509 34 HOH HOH . F 4 HOH A 10 510 9 HOH HOH . F 4 HOH A 11 511 37 HOH HOH . F 4 HOH A 12 512 73 HOH HOH . F 4 HOH A 13 513 143 HOH HOH . F 4 HOH A 14 514 21 HOH HOH . F 4 HOH A 15 515 4 HOH HOH . F 4 HOH A 16 516 211 HOH HOH . F 4 HOH A 17 517 36 HOH HOH . F 4 HOH A 18 518 252 HOH HOH . F 4 HOH A 19 519 82 HOH HOH . F 4 HOH A 20 520 70 HOH HOH . F 4 HOH A 21 521 108 HOH HOH . F 4 HOH A 22 522 65 HOH HOH . F 4 HOH A 23 523 59 HOH HOH . F 4 HOH A 24 524 40 HOH HOH . F 4 HOH A 25 525 90 HOH HOH . F 4 HOH A 26 526 146 HOH HOH . F 4 HOH A 27 527 91 HOH HOH . F 4 HOH A 28 528 170 HOH HOH . F 4 HOH A 29 529 60 HOH HOH . F 4 HOH A 30 530 102 HOH HOH . F 4 HOH A 31 531 1 HOH HOH . F 4 HOH A 32 532 155 HOH HOH . F 4 HOH A 33 533 41 HOH HOH . F 4 HOH A 34 534 12 HOH HOH . F 4 HOH A 35 535 229 HOH HOH . F 4 HOH A 36 536 136 HOH HOH . F 4 HOH A 37 537 62 HOH HOH . F 4 HOH A 38 538 164 HOH HOH . F 4 HOH A 39 539 175 HOH HOH . F 4 HOH A 40 540 135 HOH HOH . F 4 HOH A 41 541 42 HOH HOH . F 4 HOH A 42 542 35 HOH HOH . F 4 HOH A 43 543 53 HOH HOH . F 4 HOH A 44 544 96 HOH HOH . F 4 HOH A 45 545 236 HOH HOH . F 4 HOH A 46 546 79 HOH HOH . F 4 HOH A 47 547 81 HOH HOH . F 4 HOH A 48 548 18 HOH HOH . F 4 HOH A 49 549 156 HOH HOH . F 4 HOH A 50 550 15 HOH HOH . F 4 HOH A 51 551 20 HOH HOH . F 4 HOH A 52 552 16 HOH HOH . F 4 HOH A 53 553 256 HOH HOH . F 4 HOH A 54 554 215 HOH HOH . F 4 HOH A 55 555 69 HOH HOH . F 4 HOH A 56 556 76 HOH HOH . F 4 HOH A 57 557 3 HOH HOH . F 4 HOH A 58 558 33 HOH HOH . F 4 HOH A 59 559 99 HOH HOH . F 4 HOH A 60 560 74 HOH HOH . F 4 HOH A 61 561 263 HOH HOH . F 4 HOH A 62 562 26 HOH HOH . F 4 HOH A 63 563 66 HOH HOH . F 4 HOH A 64 564 50 HOH HOH . F 4 HOH A 65 565 265 HOH HOH . F 4 HOH A 66 566 200 HOH HOH . F 4 HOH A 67 567 107 HOH HOH . F 4 HOH A 68 568 19 HOH HOH . F 4 HOH A 69 569 24 HOH HOH . F 4 HOH A 70 570 160 HOH HOH . F 4 HOH A 71 571 13 HOH HOH . F 4 HOH A 72 572 57 HOH HOH . F 4 HOH A 73 573 138 HOH HOH . F 4 HOH A 74 574 75 HOH HOH . F 4 HOH A 75 575 27 HOH HOH . F 4 HOH A 76 576 6 HOH HOH . F 4 HOH A 77 577 52 HOH HOH . F 4 HOH A 78 578 5 HOH HOH . F 4 HOH A 79 579 98 HOH HOH . F 4 HOH A 80 580 123 HOH HOH . F 4 HOH A 81 581 141 HOH HOH . F 4 HOH A 82 582 11 HOH HOH . F 4 HOH A 83 583 7 HOH HOH . F 4 HOH A 84 584 157 HOH HOH . F 4 HOH A 85 585 85 HOH HOH . F 4 HOH A 86 586 83 HOH HOH . F 4 HOH A 87 587 177 HOH HOH . F 4 HOH A 88 588 120 HOH HOH . F 4 HOH A 89 589 277 HOH HOH . F 4 HOH A 90 590 17 HOH HOH . F 4 HOH A 91 591 268 HOH HOH . F 4 HOH A 92 592 278 HOH HOH . F 4 HOH A 93 593 115 HOH HOH . F 4 HOH A 94 594 97 HOH HOH . F 4 HOH A 95 595 162 HOH HOH . F 4 HOH A 96 596 118 HOH HOH . F 4 HOH A 97 597 127 HOH HOH . F 4 HOH A 98 598 179 HOH HOH . F 4 HOH A 99 599 137 HOH HOH . F 4 HOH A 100 600 124 HOH HOH . F 4 HOH A 101 601 110 HOH HOH . F 4 HOH A 102 602 28 HOH HOH . F 4 HOH A 103 603 154 HOH HOH . F 4 HOH A 104 604 147 HOH HOH . F 4 HOH A 105 605 106 HOH HOH . F 4 HOH A 106 606 112 HOH HOH . F 4 HOH A 107 607 144 HOH HOH . F 4 HOH A 108 608 207 HOH HOH . F 4 HOH A 109 609 281 HOH HOH . F 4 HOH A 110 610 169 HOH HOH . F 4 HOH A 111 611 68 HOH HOH . F 4 HOH A 112 612 104 HOH HOH . F 4 HOH A 113 613 191 HOH HOH . F 4 HOH A 114 614 77 HOH HOH . F 4 HOH A 115 615 84 HOH HOH . F 4 HOH A 116 616 78 HOH HOH . F 4 HOH A 117 617 58 HOH HOH . F 4 HOH A 118 618 201 HOH HOH . F 4 HOH A 119 619 212 HOH HOH . F 4 HOH A 120 620 72 HOH HOH . F 4 HOH A 121 621 267 HOH HOH . F 4 HOH A 122 622 241 HOH HOH . F 4 HOH A 123 623 55 HOH HOH . F 4 HOH A 124 624 125 HOH HOH . F 4 HOH A 125 625 161 HOH HOH . F 4 HOH A 126 626 32 HOH HOH . F 4 HOH A 127 627 260 HOH HOH . F 4 HOH A 128 628 149 HOH HOH . F 4 HOH A 129 629 254 HOH HOH . F 4 HOH A 130 630 80 HOH HOH . F 4 HOH A 131 631 280 HOH HOH . F 4 HOH A 132 632 227 HOH HOH . F 4 HOH A 133 633 56 HOH HOH . F 4 HOH A 134 634 31 HOH HOH . F 4 HOH A 135 635 23 HOH HOH . F 4 HOH A 136 636 244 HOH HOH . F 4 HOH A 137 637 39 HOH HOH . F 4 HOH A 138 638 133 HOH HOH . F 4 HOH A 139 639 243 HOH HOH . F 4 HOH A 140 640 51 HOH HOH . F 4 HOH A 141 641 8 HOH HOH . F 4 HOH A 142 642 129 HOH HOH . F 4 HOH A 143 643 92 HOH HOH . F 4 HOH A 144 644 111 HOH HOH . F 4 HOH A 145 645 44 HOH HOH . F 4 HOH A 146 646 232 HOH HOH . F 4 HOH A 147 647 279 HOH HOH . F 4 HOH A 148 648 64 HOH HOH . F 4 HOH A 149 649 30 HOH HOH . F 4 HOH A 150 650 61 HOH HOH . F 4 HOH A 151 651 271 HOH HOH . F 4 HOH A 152 652 93 HOH HOH . F 4 HOH A 153 653 216 HOH HOH . F 4 HOH A 154 654 45 HOH HOH . F 4 HOH A 155 655 163 HOH HOH . F 4 HOH A 156 656 193 HOH HOH . F 4 HOH A 157 657 257 HOH HOH . F 4 HOH A 158 658 22 HOH HOH . F 4 HOH A 159 659 116 HOH HOH . F 4 HOH A 160 660 105 HOH HOH . F 4 HOH A 161 661 130 HOH HOH . F 4 HOH A 162 662 54 HOH HOH . F 4 HOH A 163 663 181 HOH HOH . F 4 HOH A 164 664 48 HOH HOH . F 4 HOH A 165 665 275 HOH HOH . F 4 HOH A 166 666 88 HOH HOH . F 4 HOH A 167 667 184 HOH HOH . F 4 HOH A 168 668 233 HOH HOH . F 4 HOH A 169 669 274 HOH HOH . F 4 HOH A 170 670 206 HOH HOH . F 4 HOH A 171 671 183 HOH HOH . F 4 HOH A 172 672 270 HOH HOH . F 4 HOH A 173 673 196 HOH HOH . F 4 HOH A 174 674 47 HOH HOH . F 4 HOH A 175 675 237 HOH HOH . F 4 HOH A 176 676 273 HOH HOH . F 4 HOH A 177 677 109 HOH HOH . F 4 HOH A 178 678 221 HOH HOH . F 4 HOH A 179 679 166 HOH HOH . F 4 HOH A 180 680 195 HOH HOH . F 4 HOH A 181 681 86 HOH HOH . F 4 HOH A 182 682 217 HOH HOH . F 4 HOH A 183 683 71 HOH HOH . F 4 HOH A 184 684 158 HOH HOH . F 4 HOH A 185 685 176 HOH HOH . F 4 HOH A 186 686 269 HOH HOH . F 4 HOH A 187 687 209 HOH HOH . F 4 HOH A 188 688 131 HOH HOH . F 4 HOH A 189 689 245 HOH HOH . F 4 HOH A 190 690 189 HOH HOH . F 4 HOH A 191 691 134 HOH HOH . F 4 HOH A 192 692 223 HOH HOH . F 4 HOH A 193 693 114 HOH HOH . F 4 HOH A 194 694 178 HOH HOH . F 4 HOH A 195 695 220 HOH HOH . F 4 HOH A 196 696 283 HOH HOH . F 4 HOH A 197 697 192 HOH HOH . F 4 HOH A 198 698 198 HOH HOH . F 4 HOH A 199 699 282 HOH HOH . F 4 HOH A 200 700 103 HOH HOH . F 4 HOH A 201 701 213 HOH HOH . F 4 HOH A 202 702 113 HOH HOH . F 4 HOH A 203 703 87 HOH HOH . F 4 HOH A 204 704 139 HOH HOH . F 4 HOH A 205 705 276 HOH HOH . F 4 HOH A 206 706 46 HOH HOH . F 4 HOH A 207 707 258 HOH HOH . F 4 HOH A 208 708 186 HOH HOH . F 4 HOH A 209 709 182 HOH HOH . F 4 HOH A 210 710 255 HOH HOH . F 4 HOH A 211 711 188 HOH HOH . F 4 HOH A 212 712 38 HOH HOH . F 4 HOH A 213 713 248 HOH HOH . F 4 HOH A 214 714 126 HOH HOH . F 4 HOH A 215 715 140 HOH HOH . F 4 HOH A 216 716 67 HOH HOH . F 4 HOH A 217 717 95 HOH HOH . F 4 HOH A 218 718 234 HOH HOH . F 4 HOH A 219 719 240 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 2 6.037 -1.022 -6.22 1 54.03 ? S DMS 402 A 1 HETATM 2 O O DMS . . . C 2 6.6 -0.743 -7.546 1 54.35 ? O DMS 402 A 1 HETATM 3 C C1 DMS . . . C 2 7.427 -0.979 -5.15 1 53.95 ? C1 DMS 402 A 1 HETATM 4 C C2 DMS . . . C 2 5.7 -2.741 -6.237 1 53.51 ? C2 DMS 402 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 231 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #