data_7GGN # _model_server_result.job_id ooYldG1-vGl985ke9m40oQ _model_server_result.datetime_utc '2024-11-21 08:40:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ggn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7GGN # _exptl.entry_id 7GGN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.47 _cell.angle_gamma 90 _cell.entry_id 7GGN _cell.length_a 112.697 _cell.length_b 52.95 _cell.length_c 44.973 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GGN _atom_sites.fract_transf_matrix[1][1] 0.008873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001962 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018886 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022773 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 3 P0X A 1 404 1101 P0X LIG . F 4 HOH A 1 501 157 HOH HOH . F 4 HOH A 2 502 252 HOH HOH . F 4 HOH A 3 503 138 HOH HOH . F 4 HOH A 4 504 270 HOH HOH . F 4 HOH A 5 505 102 HOH HOH . F 4 HOH A 6 506 9 HOH HOH . F 4 HOH A 7 507 29 HOH HOH . F 4 HOH A 8 508 79 HOH HOH . F 4 HOH A 9 509 94 HOH HOH . F 4 HOH A 10 510 60 HOH HOH . F 4 HOH A 11 511 35 HOH HOH . F 4 HOH A 12 512 21 HOH HOH . F 4 HOH A 13 513 70 HOH HOH . F 4 HOH A 14 514 261 HOH HOH . F 4 HOH A 15 515 10 HOH HOH . F 4 HOH A 16 516 1 HOH HOH . F 4 HOH A 17 517 77 HOH HOH . F 4 HOH A 18 518 247 HOH HOH . F 4 HOH A 19 519 50 HOH HOH . F 4 HOH A 20 520 27 HOH HOH . F 4 HOH A 21 521 91 HOH HOH . F 4 HOH A 22 522 136 HOH HOH . F 4 HOH A 23 523 179 HOH HOH . F 4 HOH A 24 524 288 HOH HOH . F 4 HOH A 25 525 24 HOH HOH . F 4 HOH A 26 526 74 HOH HOH . F 4 HOH A 27 527 20 HOH HOH . F 4 HOH A 28 528 52 HOH HOH . F 4 HOH A 29 529 41 HOH HOH . F 4 HOH A 30 530 155 HOH HOH . F 4 HOH A 31 531 37 HOH HOH . F 4 HOH A 32 532 156 HOH HOH . F 4 HOH A 33 533 73 HOH HOH . F 4 HOH A 34 534 232 HOH HOH . F 4 HOH A 35 535 4 HOH HOH . F 4 HOH A 36 536 62 HOH HOH . F 4 HOH A 37 537 96 HOH HOH . F 4 HOH A 38 538 36 HOH HOH . F 4 HOH A 39 539 53 HOH HOH . F 4 HOH A 40 540 127 HOH HOH . F 4 HOH A 41 541 76 HOH HOH . F 4 HOH A 42 542 275 HOH HOH . F 4 HOH A 43 543 12 HOH HOH . F 4 HOH A 44 544 59 HOH HOH . F 4 HOH A 45 545 75 HOH HOH . F 4 HOH A 46 546 283 HOH HOH . F 4 HOH A 47 547 256 HOH HOH . F 4 HOH A 48 548 213 HOH HOH . F 4 HOH A 49 549 26 HOH HOH . F 4 HOH A 50 550 30 HOH HOH . F 4 HOH A 51 551 231 HOH HOH . F 4 HOH A 52 552 5 HOH HOH . F 4 HOH A 53 553 34 HOH HOH . F 4 HOH A 54 554 6 HOH HOH . F 4 HOH A 55 555 147 HOH HOH . F 4 HOH A 56 556 11 HOH HOH . F 4 HOH A 57 557 175 HOH HOH . F 4 HOH A 58 558 115 HOH HOH . F 4 HOH A 59 559 40 HOH HOH . F 4 HOH A 60 560 211 HOH HOH . F 4 HOH A 61 561 19 HOH HOH . F 4 HOH A 62 562 120 HOH HOH . F 4 HOH A 63 563 106 HOH HOH . F 4 HOH A 64 564 3 HOH HOH . F 4 HOH A 65 565 84 HOH HOH . F 4 HOH A 66 566 80 HOH HOH . F 4 HOH A 67 567 90 HOH HOH . F 4 HOH A 68 568 42 HOH HOH . F 4 HOH A 69 569 124 HOH HOH . F 4 HOH A 70 570 64 HOH HOH . F 4 HOH A 71 571 215 HOH HOH . F 4 HOH A 72 572 112 HOH HOH . F 4 HOH A 73 573 39 HOH HOH . F 4 HOH A 74 574 7 HOH HOH . F 4 HOH A 75 575 108 HOH HOH . F 4 HOH A 76 576 177 HOH HOH . F 4 HOH A 77 577 17 HOH HOH . F 4 HOH A 78 578 55 HOH HOH . F 4 HOH A 79 579 267 HOH HOH . F 4 HOH A 80 580 31 HOH HOH . F 4 HOH A 81 581 28 HOH HOH . F 4 HOH A 82 582 83 HOH HOH . F 4 HOH A 83 583 253 HOH HOH . F 4 HOH A 84 584 230 HOH HOH . F 4 HOH A 85 585 18 HOH HOH . F 4 HOH A 86 586 82 HOH HOH . F 4 HOH A 87 587 15 HOH HOH . F 4 HOH A 88 588 81 HOH HOH . F 4 HOH A 89 589 272 HOH HOH . F 4 HOH A 90 590 110 HOH HOH . F 4 HOH A 91 591 122 HOH HOH . F 4 HOH A 92 592 57 HOH HOH . F 4 HOH A 93 593 56 HOH HOH . F 4 HOH A 94 594 89 HOH HOH . F 4 HOH A 95 595 54 HOH HOH . F 4 HOH A 96 596 278 HOH HOH . F 4 HOH A 97 597 93 HOH HOH . F 4 HOH A 98 598 97 HOH HOH . F 4 HOH A 99 599 129 HOH HOH . F 4 HOH A 100 600 171 HOH HOH . F 4 HOH A 101 601 198 HOH HOH . F 4 HOH A 102 602 92 HOH HOH . F 4 HOH A 103 603 61 HOH HOH . F 4 HOH A 104 604 197 HOH HOH . F 4 HOH A 105 605 14 HOH HOH . F 4 HOH A 106 606 68 HOH HOH . F 4 HOH A 107 607 123 HOH HOH . F 4 HOH A 108 608 201 HOH HOH . F 4 HOH A 109 609 86 HOH HOH . F 4 HOH A 110 610 212 HOH HOH . F 4 HOH A 111 611 263 HOH HOH . F 4 HOH A 112 612 45 HOH HOH . F 4 HOH A 113 613 98 HOH HOH . F 4 HOH A 114 614 163 HOH HOH . F 4 HOH A 115 615 229 HOH HOH . F 4 HOH A 116 616 51 HOH HOH . F 4 HOH A 117 617 135 HOH HOH . F 4 HOH A 118 618 146 HOH HOH . F 4 HOH A 119 619 44 HOH HOH . F 4 HOH A 120 620 137 HOH HOH . F 4 HOH A 121 621 187 HOH HOH . F 4 HOH A 122 622 13 HOH HOH . F 4 HOH A 123 623 284 HOH HOH . F 4 HOH A 124 624 100 HOH HOH . F 4 HOH A 125 625 8 HOH HOH . F 4 HOH A 126 626 72 HOH HOH . F 4 HOH A 127 627 241 HOH HOH . F 4 HOH A 128 628 105 HOH HOH . F 4 HOH A 129 629 23 HOH HOH . F 4 HOH A 130 630 48 HOH HOH . F 4 HOH A 131 631 172 HOH HOH . F 4 HOH A 132 632 160 HOH HOH . F 4 HOH A 133 633 2 HOH HOH . F 4 HOH A 134 634 243 HOH HOH . F 4 HOH A 135 635 132 HOH HOH . F 4 HOH A 136 636 196 HOH HOH . F 4 HOH A 137 637 183 HOH HOH . F 4 HOH A 138 638 254 HOH HOH . F 4 HOH A 139 639 214 HOH HOH . F 4 HOH A 140 640 78 HOH HOH . F 4 HOH A 141 641 32 HOH HOH . F 4 HOH A 142 642 125 HOH HOH . F 4 HOH A 143 643 22 HOH HOH . F 4 HOH A 144 644 162 HOH HOH . F 4 HOH A 145 645 47 HOH HOH . F 4 HOH A 146 646 16 HOH HOH . F 4 HOH A 147 647 167 HOH HOH . F 4 HOH A 148 648 111 HOH HOH . F 4 HOH A 149 649 130 HOH HOH . F 4 HOH A 150 650 109 HOH HOH . F 4 HOH A 151 651 191 HOH HOH . F 4 HOH A 152 652 206 HOH HOH . F 4 HOH A 153 653 134 HOH HOH . F 4 HOH A 154 654 49 HOH HOH . F 4 HOH A 155 655 286 HOH HOH . F 4 HOH A 156 656 195 HOH HOH . F 4 HOH A 157 657 189 HOH HOH . F 4 HOH A 158 658 148 HOH HOH . F 4 HOH A 159 659 116 HOH HOH . F 4 HOH A 160 660 184 HOH HOH . F 4 HOH A 161 661 166 HOH HOH . F 4 HOH A 162 662 269 HOH HOH . F 4 HOH A 163 663 221 HOH HOH . F 4 HOH A 164 664 145 HOH HOH . F 4 HOH A 165 665 71 HOH HOH . F 4 HOH A 166 666 228 HOH HOH . F 4 HOH A 167 667 186 HOH HOH . F 4 HOH A 168 668 192 HOH HOH . F 4 HOH A 169 669 280 HOH HOH . F 4 HOH A 170 670 131 HOH HOH . F 4 HOH A 171 671 217 HOH HOH . F 4 HOH A 172 672 281 HOH HOH . F 4 HOH A 173 673 113 HOH HOH . F 4 HOH A 174 674 246 HOH HOH . F 4 HOH A 175 675 251 HOH HOH . F 4 HOH A 176 676 258 HOH HOH . F 4 HOH A 177 677 266 HOH HOH . F 4 HOH A 178 678 209 HOH HOH . F 4 HOH A 179 679 103 HOH HOH . F 4 HOH A 180 680 178 HOH HOH . F 4 HOH A 181 681 285 HOH HOH . F 4 HOH A 182 682 114 HOH HOH . F 4 HOH A 183 683 234 HOH HOH . F 4 HOH A 184 684 165 HOH HOH . F 4 HOH A 185 685 87 HOH HOH . F 4 HOH A 186 686 279 HOH HOH . F 4 HOH A 187 687 46 HOH HOH . F 4 HOH A 188 688 140 HOH HOH . F 4 HOH A 189 689 38 HOH HOH . F 4 HOH A 190 690 95 HOH HOH . F 4 HOH A 191 691 126 HOH HOH . F 4 HOH A 192 692 182 HOH HOH . F 4 HOH A 193 693 287 HOH HOH . F 4 HOH A 194 694 282 HOH HOH . F 4 HOH A 195 695 240 HOH HOH . F 4 HOH A 196 696 238 HOH HOH . F 4 HOH A 197 697 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . B 2 7.117 -27.993 21.736 1 45.01 ? S DMS 401 A 1 HETATM 2 O O DMS . . . B 2 7.663 -27.008 22.667 1 44.58 ? O DMS 401 A 1 HETATM 3 C C1 DMS . . . B 2 5.81 -28.775 22.651 1 44.96 ? C1 DMS 401 A 1 HETATM 4 C C2 DMS . . . B 2 6.122 -27.14 20.559 1 44.7 ? C2 DMS 401 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #