data_7GGU # _model_server_result.job_id I_E0uNeMlZOnj9-ScM3Lug _model_server_result.datetime_utc '2024-11-21 09:29:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ggu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 7GGU # _exptl.entry_id 7GGU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.46 _cell.angle_gamma 90 _cell.entry_id 7GGU _cell.length_a 112.76 _cell.length_b 52.88 _cell.length_c 44.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GGU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 F N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GGU _atom_sites.fract_transf_matrix[1][1] 0.008868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00196 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022834 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 3 PJ6 A 1 404 1005 PJ6 LIG . F 2 DMS A 1 405 1006 DMS DMS . G 4 HOH A 1 501 9 HOH HOH . G 4 HOH A 2 502 40 HOH HOH . G 4 HOH A 3 503 41 HOH HOH . G 4 HOH A 4 504 209 HOH HOH . G 4 HOH A 5 505 76 HOH HOH . G 4 HOH A 6 506 109 HOH HOH . G 4 HOH A 7 507 271 HOH HOH . G 4 HOH A 8 508 34 HOH HOH . G 4 HOH A 9 509 247 HOH HOH . G 4 HOH A 10 510 154 HOH HOH . G 4 HOH A 11 511 1 HOH HOH . G 4 HOH A 12 512 70 HOH HOH . G 4 HOH A 13 513 101 HOH HOH . G 4 HOH A 14 514 24 HOH HOH . G 4 HOH A 15 515 50 HOH HOH . G 4 HOH A 16 516 60 HOH HOH . G 4 HOH A 17 517 20 HOH HOH . G 4 HOH A 18 518 18 HOH HOH . G 4 HOH A 19 519 59 HOH HOH . G 4 HOH A 20 520 74 HOH HOH . G 4 HOH A 21 521 10 HOH HOH . G 4 HOH A 22 522 28 HOH HOH . G 4 HOH A 23 523 26 HOH HOH . G 4 HOH A 24 524 194 HOH HOH . G 4 HOH A 25 525 202 HOH HOH . G 4 HOH A 26 526 142 HOH HOH . G 4 HOH A 27 527 57 HOH HOH . G 4 HOH A 28 528 149 HOH HOH . G 4 HOH A 29 529 6 HOH HOH . G 4 HOH A 30 530 102 HOH HOH . G 4 HOH A 31 531 242 HOH HOH . G 4 HOH A 32 532 52 HOH HOH . G 4 HOH A 33 533 116 HOH HOH . G 4 HOH A 34 534 266 HOH HOH . G 4 HOH A 35 535 17 HOH HOH . G 4 HOH A 36 536 36 HOH HOH . G 4 HOH A 37 537 49 HOH HOH . G 4 HOH A 38 538 94 HOH HOH . G 4 HOH A 39 539 5 HOH HOH . G 4 HOH A 40 540 82 HOH HOH . G 4 HOH A 41 541 229 HOH HOH . G 4 HOH A 42 542 272 HOH HOH . G 4 HOH A 43 543 85 HOH HOH . G 4 HOH A 44 544 69 HOH HOH . G 4 HOH A 45 545 3 HOH HOH . G 4 HOH A 46 546 12 HOH HOH . G 4 HOH A 47 547 98 HOH HOH . G 4 HOH A 48 548 75 HOH HOH . G 4 HOH A 49 549 117 HOH HOH . G 4 HOH A 50 550 58 HOH HOH . G 4 HOH A 51 551 56 HOH HOH . G 4 HOH A 52 552 197 HOH HOH . G 4 HOH A 53 553 31 HOH HOH . G 4 HOH A 54 554 159 HOH HOH . G 4 HOH A 55 555 39 HOH HOH . G 4 HOH A 56 556 189 HOH HOH . G 4 HOH A 57 557 161 HOH HOH . G 4 HOH A 58 558 228 HOH HOH . G 4 HOH A 59 559 16 HOH HOH . G 4 HOH A 60 560 193 HOH HOH . G 4 HOH A 61 561 33 HOH HOH . G 4 HOH A 62 562 27 HOH HOH . G 4 HOH A 63 563 127 HOH HOH . G 4 HOH A 64 564 32 HOH HOH . G 4 HOH A 65 565 146 HOH HOH . G 4 HOH A 66 566 210 HOH HOH . G 4 HOH A 67 567 114 HOH HOH . G 4 HOH A 68 568 7 HOH HOH . G 4 HOH A 69 569 77 HOH HOH . G 4 HOH A 70 570 71 HOH HOH . G 4 HOH A 71 571 140 HOH HOH . G 4 HOH A 72 572 261 HOH HOH . G 4 HOH A 73 573 22 HOH HOH . G 4 HOH A 74 574 190 HOH HOH . G 4 HOH A 75 575 48 HOH HOH . G 4 HOH A 76 576 13 HOH HOH . G 4 HOH A 77 577 174 HOH HOH . G 4 HOH A 78 578 8 HOH HOH . G 4 HOH A 79 579 78 HOH HOH . G 4 HOH A 80 580 2 HOH HOH . G 4 HOH A 81 581 23 HOH HOH . G 4 HOH A 82 582 182 HOH HOH . G 4 HOH A 83 583 179 HOH HOH . G 4 HOH A 84 584 265 HOH HOH . G 4 HOH A 85 585 106 HOH HOH . G 4 HOH A 86 586 230 HOH HOH . G 4 HOH A 87 587 145 HOH HOH . G 4 HOH A 88 588 47 HOH HOH . G 4 HOH A 89 589 29 HOH HOH . G 4 HOH A 90 590 171 HOH HOH . G 4 HOH A 91 591 219 HOH HOH . G 4 HOH A 92 592 130 HOH HOH . G 4 HOH A 93 593 227 HOH HOH . G 4 HOH A 94 594 223 HOH HOH . G 4 HOH A 95 595 128 HOH HOH . G 4 HOH A 96 596 273 HOH HOH . G 4 HOH A 97 597 87 HOH HOH . G 4 HOH A 98 598 252 HOH HOH . G 4 HOH A 99 599 177 HOH HOH . G 4 HOH A 100 600 103 HOH HOH . G 4 HOH A 101 601 46 HOH HOH . G 4 HOH A 102 602 180 HOH HOH . G 4 HOH A 103 603 218 HOH HOH . G 4 HOH A 104 604 233 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 2 2.329 -19.037 8.431 1 66.64 ? S DMS 403 A 1 HETATM 2 O O DMS . . . D 2 3.645 -18.6 8.912 1 66.29 ? O DMS 403 A 1 HETATM 3 C C1 DMS . . . D 2 1.103 -18.07 9.276 1 66.43 ? C1 DMS 403 A 1 HETATM 4 C C2 DMS . . . D 2 2.025 -20.555 9.311 1 66.91 ? C2 DMS 403 A 1 # _model_server_stats.io_time_ms 132 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #