data_7GJ0 # _model_server_result.job_id n0jAZhTZWm-QMWjUpH8xug _model_server_result.datetime_utc '2024-11-21 11:20:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gj0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":407}' # _entry.id 7GJ0 # _exptl.entry_id 7GJ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GJ0 _cell.length_a 67.16 _cell.length_b 98.6 _cell.length_c 102.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GJ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GJ0 _atom_sites.fract_transf_matrix[1][1] 0.01489 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010142 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009741 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 401 401 DMS DMS . D 2 DMS A 1 402 402 DMS DMS . E 2 DMS A 1 403 403 DMS DMS . F 3 QJL A 1 404 404 QJL LIG . G 2 DMS A 1 405 405 DMS DMS . H 2 DMS A 1 406 406 DMS DMS . I 2 DMS A 1 407 407 DMS DMS . J 2 DMS A 1 408 407 DMS DMS . K 2 DMS B 1 401 401 DMS DMS . L 2 DMS B 1 402 402 DMS DMS . M 3 QJL B 1 403 403 QJL LIG . N 2 DMS B 1 404 404 DMS DMS . O 2 DMS B 1 405 405 DMS DMS . P 2 DMS B 1 406 406 DMS DMS . Q 2 DMS B 1 407 408 DMS DMS . R 4 HOH A 1 501 356 HOH HOH . R 4 HOH A 2 502 366 HOH HOH . R 4 HOH A 3 503 72 HOH HOH . R 4 HOH A 4 504 222 HOH HOH . R 4 HOH A 5 505 74 HOH HOH . R 4 HOH A 6 506 153 HOH HOH . R 4 HOH A 7 507 301 HOH HOH . R 4 HOH A 8 508 357 HOH HOH . R 4 HOH A 9 509 177 HOH HOH . R 4 HOH A 10 510 304 HOH HOH . R 4 HOH A 11 511 76 HOH HOH . R 4 HOH A 12 512 19 HOH HOH . R 4 HOH A 13 513 63 HOH HOH . R 4 HOH A 14 514 107 HOH HOH . R 4 HOH A 15 515 210 HOH HOH . R 4 HOH A 16 516 313 HOH HOH . R 4 HOH A 17 517 104 HOH HOH . R 4 HOH A 18 518 217 HOH HOH . R 4 HOH A 19 519 79 HOH HOH . R 4 HOH A 20 520 4 HOH HOH . R 4 HOH A 21 521 82 HOH HOH . R 4 HOH A 22 522 283 HOH HOH . R 4 HOH A 23 523 73 HOH HOH . R 4 HOH A 24 524 257 HOH HOH . R 4 HOH A 25 525 85 HOH HOH . R 4 HOH A 26 526 266 HOH HOH . R 4 HOH A 27 527 189 HOH HOH . R 4 HOH A 28 528 87 HOH HOH . R 4 HOH A 29 529 89 HOH HOH . R 4 HOH A 30 530 238 HOH HOH . R 4 HOH A 31 531 12 HOH HOH . R 4 HOH A 32 532 289 HOH HOH . R 4 HOH A 33 533 78 HOH HOH . R 4 HOH A 34 534 256 HOH HOH . R 4 HOH A 35 535 114 HOH HOH . R 4 HOH A 36 536 202 HOH HOH . R 4 HOH A 37 537 255 HOH HOH . R 4 HOH A 38 538 86 HOH HOH . R 4 HOH A 39 539 159 HOH HOH . R 4 HOH A 40 540 84 HOH HOH . R 4 HOH A 41 541 83 HOH HOH . R 4 HOH A 42 542 71 HOH HOH . R 4 HOH A 43 543 98 HOH HOH . R 4 HOH A 44 544 94 HOH HOH . R 4 HOH A 45 545 140 HOH HOH . R 4 HOH A 46 546 75 HOH HOH . R 4 HOH A 47 547 323 HOH HOH . R 4 HOH A 48 548 105 HOH HOH . R 4 HOH A 49 549 97 HOH HOH . R 4 HOH A 50 550 80 HOH HOH . R 4 HOH A 51 551 88 HOH HOH . R 4 HOH A 52 552 81 HOH HOH . R 4 HOH A 53 553 216 HOH HOH . R 4 HOH A 54 554 319 HOH HOH . R 4 HOH A 55 555 320 HOH HOH . R 4 HOH A 56 556 347 HOH HOH . R 4 HOH A 57 557 203 HOH HOH . R 4 HOH A 58 558 244 HOH HOH . R 4 HOH A 59 559 260 HOH HOH . R 4 HOH A 60 560 243 HOH HOH . R 4 HOH A 61 561 241 HOH HOH . R 4 HOH A 62 562 128 HOH HOH . R 4 HOH A 63 563 179 HOH HOH . R 4 HOH A 64 564 117 HOH HOH . R 4 HOH A 65 565 250 HOH HOH . R 4 HOH A 66 566 137 HOH HOH . R 4 HOH A 67 567 309 HOH HOH . R 4 HOH A 68 568 132 HOH HOH . R 4 HOH A 69 569 290 HOH HOH . R 4 HOH A 70 570 253 HOH HOH . R 4 HOH A 71 571 96 HOH HOH . R 4 HOH A 72 572 2 HOH HOH . R 4 HOH A 73 573 112 HOH HOH . R 4 HOH A 74 574 390 HOH HOH . R 4 HOH A 75 575 149 HOH HOH . R 4 HOH A 76 576 77 HOH HOH . R 4 HOH A 77 577 265 HOH HOH . R 4 HOH A 78 578 68 HOH HOH . R 4 HOH A 79 579 93 HOH HOH . R 4 HOH A 80 580 124 HOH HOH . R 4 HOH A 81 581 324 HOH HOH . R 4 HOH A 82 582 100 HOH HOH . R 4 HOH A 83 583 99 HOH HOH . R 4 HOH A 84 584 111 HOH HOH . R 4 HOH A 85 585 252 HOH HOH . R 4 HOH A 86 586 156 HOH HOH . R 4 HOH A 87 587 125 HOH HOH . R 4 HOH A 88 588 158 HOH HOH . R 4 HOH A 89 589 90 HOH HOH . R 4 HOH A 90 590 164 HOH HOH . R 4 HOH A 91 591 220 HOH HOH . R 4 HOH A 92 592 106 HOH HOH . R 4 HOH A 93 593 196 HOH HOH . R 4 HOH A 94 594 271 HOH HOH . R 4 HOH A 95 595 55 HOH HOH . R 4 HOH A 96 596 110 HOH HOH . R 4 HOH A 97 597 367 HOH HOH . R 4 HOH A 98 598 108 HOH HOH . R 4 HOH A 99 599 198 HOH HOH . R 4 HOH A 100 600 175 HOH HOH . R 4 HOH A 101 601 288 HOH HOH . R 4 HOH A 102 602 120 HOH HOH . R 4 HOH A 103 603 171 HOH HOH . R 4 HOH A 104 604 371 HOH HOH . R 4 HOH A 105 605 169 HOH HOH . R 4 HOH A 106 606 121 HOH HOH . R 4 HOH A 107 607 263 HOH HOH . R 4 HOH A 108 608 307 HOH HOH . R 4 HOH A 109 609 16 HOH HOH . R 4 HOH A 110 610 214 HOH HOH . R 4 HOH A 111 611 361 HOH HOH . R 4 HOH A 112 612 109 HOH HOH . R 4 HOH A 113 613 254 HOH HOH . R 4 HOH A 114 614 233 HOH HOH . R 4 HOH A 115 615 102 HOH HOH . R 4 HOH A 116 616 375 HOH HOH . R 4 HOH A 117 617 9 HOH HOH . R 4 HOH A 118 618 115 HOH HOH . R 4 HOH A 119 619 130 HOH HOH . R 4 HOH A 120 620 122 HOH HOH . R 4 HOH A 121 621 129 HOH HOH . R 4 HOH A 122 622 139 HOH HOH . R 4 HOH A 123 623 380 HOH HOH . R 4 HOH A 124 624 113 HOH HOH . R 4 HOH A 125 625 246 HOH HOH . R 4 HOH A 126 626 227 HOH HOH . R 4 HOH A 127 627 123 HOH HOH . R 4 HOH A 128 628 213 HOH HOH . R 4 HOH A 129 629 1 HOH HOH . R 4 HOH A 130 630 136 HOH HOH . R 4 HOH A 131 631 359 HOH HOH . R 4 HOH A 132 632 138 HOH HOH . R 4 HOH A 133 633 388 HOH HOH . R 4 HOH A 134 634 391 HOH HOH . R 4 HOH A 135 635 135 HOH HOH . R 4 HOH A 136 636 127 HOH HOH . R 4 HOH A 137 637 119 HOH HOH . R 4 HOH A 138 638 317 HOH HOH . R 4 HOH A 139 639 126 HOH HOH . R 4 HOH A 140 640 249 HOH HOH . R 4 HOH A 141 641 92 HOH HOH . R 4 HOH A 142 642 358 HOH HOH . R 4 HOH A 143 643 270 HOH HOH . R 4 HOH A 144 644 282 HOH HOH . R 4 HOH A 145 645 141 HOH HOH . R 4 HOH A 146 646 207 HOH HOH . R 4 HOH A 147 647 205 HOH HOH . R 4 HOH A 148 648 376 HOH HOH . R 4 HOH A 149 649 131 HOH HOH . R 4 HOH A 150 650 173 HOH HOH . R 4 HOH A 151 651 239 HOH HOH . R 4 HOH A 152 652 208 HOH HOH . R 4 HOH A 153 653 194 HOH HOH . R 4 HOH A 154 654 225 HOH HOH . R 4 HOH A 155 655 349 HOH HOH . R 4 HOH A 156 656 15 HOH HOH . R 4 HOH A 157 657 278 HOH HOH . R 4 HOH A 158 658 360 HOH HOH . R 4 HOH A 159 659 384 HOH HOH . R 4 HOH A 160 660 372 HOH HOH . R 4 HOH A 161 661 185 HOH HOH . R 4 HOH A 162 662 381 HOH HOH . R 4 HOH A 163 663 157 HOH HOH . R 4 HOH A 164 664 362 HOH HOH . R 4 HOH A 165 665 363 HOH HOH . R 4 HOH A 166 666 11 HOH HOH . R 4 HOH A 167 667 155 HOH HOH . R 4 HOH A 168 668 343 HOH HOH . R 4 HOH A 169 669 269 HOH HOH . R 4 HOH A 170 670 143 HOH HOH . R 4 HOH A 171 671 245 HOH HOH . R 4 HOH A 172 672 350 HOH HOH . R 4 HOH A 173 673 386 HOH HOH . R 4 HOH A 174 674 286 HOH HOH . R 4 HOH A 175 675 389 HOH HOH . R 4 HOH A 176 676 385 HOH HOH . R 4 HOH A 177 677 377 HOH HOH . R 4 HOH A 178 678 211 HOH HOH . R 4 HOH A 179 679 284 HOH HOH . R 4 HOH A 180 680 18 HOH HOH . R 4 HOH A 181 681 163 HOH HOH . R 4 HOH A 182 682 387 HOH HOH . R 4 HOH A 183 683 373 HOH HOH . R 4 HOH A 184 684 192 HOH HOH . R 4 HOH A 185 685 267 HOH HOH . R 4 HOH A 186 686 204 HOH HOH . R 4 HOH A 187 687 145 HOH HOH . R 4 HOH A 188 688 316 HOH HOH . R 4 HOH A 189 689 146 HOH HOH . R 4 HOH A 190 690 374 HOH HOH . R 4 HOH A 191 691 13 HOH HOH . R 4 HOH A 192 692 341 HOH HOH . R 4 HOH A 193 693 291 HOH HOH . R 4 HOH A 194 694 191 HOH HOH . R 4 HOH A 195 695 206 HOH HOH . R 4 HOH A 196 696 150 HOH HOH . R 4 HOH A 197 697 231 HOH HOH . R 4 HOH A 198 698 364 HOH HOH . S 4 HOH B 1 501 355 HOH HOH . S 4 HOH B 2 502 61 HOH HOH . S 4 HOH B 3 503 22 HOH HOH . S 4 HOH B 4 504 188 HOH HOH . S 4 HOH B 5 505 201 HOH HOH . S 4 HOH B 6 506 21 HOH HOH . S 4 HOH B 7 507 37 HOH HOH . S 4 HOH B 8 508 181 HOH HOH . S 4 HOH B 9 509 334 HOH HOH . S 4 HOH B 10 510 318 HOH HOH . S 4 HOH B 11 511 34 HOH HOH . S 4 HOH B 12 512 242 HOH HOH . S 4 HOH B 13 513 44 HOH HOH . S 4 HOH B 14 514 368 HOH HOH . S 4 HOH B 15 515 293 HOH HOH . S 4 HOH B 16 516 118 HOH HOH . S 4 HOH B 17 517 60 HOH HOH . S 4 HOH B 18 518 29 HOH HOH . S 4 HOH B 19 519 28 HOH HOH . S 4 HOH B 20 520 261 HOH HOH . S 4 HOH B 21 521 234 HOH HOH . S 4 HOH B 22 522 43 HOH HOH . S 4 HOH B 23 523 352 HOH HOH . S 4 HOH B 24 524 346 HOH HOH . S 4 HOH B 25 525 273 HOH HOH . S 4 HOH B 26 526 33 HOH HOH . S 4 HOH B 27 527 30 HOH HOH . S 4 HOH B 28 528 268 HOH HOH . S 4 HOH B 29 529 160 HOH HOH . S 4 HOH B 30 530 20 HOH HOH . S 4 HOH B 31 531 26 HOH HOH . S 4 HOH B 32 532 331 HOH HOH . S 4 HOH B 33 533 45 HOH HOH . S 4 HOH B 34 534 32 HOH HOH . S 4 HOH B 35 535 351 HOH HOH . S 4 HOH B 36 536 193 HOH HOH . S 4 HOH B 37 537 41 HOH HOH . S 4 HOH B 38 538 36 HOH HOH . S 4 HOH B 39 539 48 HOH HOH . S 4 HOH B 40 540 25 HOH HOH . S 4 HOH B 41 541 50 HOH HOH . S 4 HOH B 42 542 325 HOH HOH . S 4 HOH B 43 543 133 HOH HOH . S 4 HOH B 44 544 27 HOH HOH . S 4 HOH B 45 545 7 HOH HOH . S 4 HOH B 46 546 333 HOH HOH . S 4 HOH B 47 547 58 HOH HOH . S 4 HOH B 48 548 226 HOH HOH . S 4 HOH B 49 549 42 HOH HOH . S 4 HOH B 50 550 332 HOH HOH . S 4 HOH B 51 551 168 HOH HOH . S 4 HOH B 52 552 47 HOH HOH . S 4 HOH B 53 553 258 HOH HOH . S 4 HOH B 54 554 297 HOH HOH . S 4 HOH B 55 555 370 HOH HOH . S 4 HOH B 56 556 218 HOH HOH . S 4 HOH B 57 557 167 HOH HOH . S 4 HOH B 58 558 365 HOH HOH . S 4 HOH B 59 559 162 HOH HOH . S 4 HOH B 60 560 40 HOH HOH . S 4 HOH B 61 561 53 HOH HOH . S 4 HOH B 62 562 264 HOH HOH . S 4 HOH B 63 563 101 HOH HOH . S 4 HOH B 64 564 172 HOH HOH . S 4 HOH B 65 565 51 HOH HOH . S 4 HOH B 66 566 95 HOH HOH . S 4 HOH B 67 567 57 HOH HOH . S 4 HOH B 68 568 38 HOH HOH . S 4 HOH B 69 569 295 HOH HOH . S 4 HOH B 70 570 64 HOH HOH . S 4 HOH B 71 571 327 HOH HOH . S 4 HOH B 72 572 353 HOH HOH . S 4 HOH B 73 573 66 HOH HOH . S 4 HOH B 74 574 378 HOH HOH . S 4 HOH B 75 575 369 HOH HOH . S 4 HOH B 76 576 62 HOH HOH . S 4 HOH B 77 577 49 HOH HOH . S 4 HOH B 78 578 67 HOH HOH . S 4 HOH B 79 579 152 HOH HOH . S 4 HOH B 80 580 166 HOH HOH . S 4 HOH B 81 581 54 HOH HOH . S 4 HOH B 82 582 235 HOH HOH . S 4 HOH B 83 583 52 HOH HOH . S 4 HOH B 84 584 382 HOH HOH . S 4 HOH B 85 585 3 HOH HOH . S 4 HOH B 86 586 151 HOH HOH . S 4 HOH B 87 587 5 HOH HOH . S 4 HOH B 88 588 178 HOH HOH . S 4 HOH B 89 589 294 HOH HOH . S 4 HOH B 90 590 200 HOH HOH . S 4 HOH B 91 591 31 HOH HOH . S 4 HOH B 92 592 379 HOH HOH . S 4 HOH B 93 593 277 HOH HOH . S 4 HOH B 94 594 236 HOH HOH . S 4 HOH B 95 595 315 HOH HOH . S 4 HOH B 96 596 298 HOH HOH . S 4 HOH B 97 597 209 HOH HOH . S 4 HOH B 98 598 314 HOH HOH . S 4 HOH B 99 599 199 HOH HOH . S 4 HOH B 100 600 46 HOH HOH . S 4 HOH B 101 601 354 HOH HOH . S 4 HOH B 102 602 348 HOH HOH . S 4 HOH B 103 603 176 HOH HOH . S 4 HOH B 104 604 219 HOH HOH . S 4 HOH B 105 605 232 HOH HOH . S 4 HOH B 106 606 259 HOH HOH . S 4 HOH B 107 607 65 HOH HOH . S 4 HOH B 108 608 383 HOH HOH . S 4 HOH B 109 609 248 HOH HOH . S 4 HOH B 110 610 345 HOH HOH . S 4 HOH B 111 611 274 HOH HOH . S 4 HOH B 112 612 329 HOH HOH . S 4 HOH B 113 613 69 HOH HOH . S 4 HOH B 114 614 39 HOH HOH . S 4 HOH B 115 615 300 HOH HOH . S 4 HOH B 116 616 221 HOH HOH . S 4 HOH B 117 617 56 HOH HOH . S 4 HOH B 118 618 247 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . Q 2 -10.129 19.785 21.759 1 88.67 ? S DMS 407 B 1 HETATM 2 O O DMS . . . Q 2 -9.763 21.149 22.175 1 88.55 ? O DMS 407 B 1 HETATM 3 C C1 DMS . . . Q 2 -11.592 19.965 20.782 1 88.73 ? C1 DMS 407 B 1 HETATM 4 C C2 DMS . . . Q 2 -10.858 19.033 23.19 1 88.59 ? C2 DMS 407 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #