data_7GJS # _model_server_result.job_id HS4sv76QYcvetl335qhU-A _model_server_result.datetime_utc '2024-11-21 09:26:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gjs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":402}' # _entry.id 7GJS # _exptl.entry_id 7GJS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GJS _cell.length_a 67.24 _cell.length_b 99.19 _cell.length_c 103.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GJS _atom_sites.fract_transf_matrix[1][1] 0.014872 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010082 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009651 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 401 401 DMS DMS . D 2 DMS A 1 402 402 DMS DMS . E 2 DMS A 1 403 403 DMS DMS . F 3 QQO A 1 404 501 QQO LIG . G 2 DMS B 1 401 502 DMS DMS . H 2 DMS B 1 402 401 DMS DMS . I 2 DMS B 1 403 402 DMS DMS . J 4 HOH A 1 501 349 HOH HOH . J 4 HOH A 2 502 72 HOH HOH . J 4 HOH A 3 503 304 HOH HOH . J 4 HOH A 4 504 153 HOH HOH . J 4 HOH A 5 505 177 HOH HOH . J 4 HOH A 6 506 222 HOH HOH . J 4 HOH A 7 507 63 HOH HOH . J 4 HOH A 8 508 340 HOH HOH . J 4 HOH A 9 509 74 HOH HOH . J 4 HOH A 10 510 354 HOH HOH . J 4 HOH A 11 511 281 HOH HOH . J 4 HOH A 12 512 73 HOH HOH . J 4 HOH A 13 513 89 HOH HOH . J 4 HOH A 14 514 189 HOH HOH . J 4 HOH A 15 515 82 HOH HOH . J 4 HOH A 16 516 302 HOH HOH . J 4 HOH A 17 517 313 HOH HOH . J 4 HOH A 18 518 165 HOH HOH . J 4 HOH A 19 519 210 HOH HOH . J 4 HOH A 20 520 114 HOH HOH . J 4 HOH A 21 521 253 HOH HOH . J 4 HOH A 22 522 94 HOH HOH . J 4 HOH A 23 523 79 HOH HOH . J 4 HOH A 24 524 217 HOH HOH . J 4 HOH A 25 525 257 HOH HOH . J 4 HOH A 26 526 343 HOH HOH . J 4 HOH A 27 527 86 HOH HOH . J 4 HOH A 28 528 76 HOH HOH . J 4 HOH A 29 529 290 HOH HOH . J 4 HOH A 30 530 266 HOH HOH . J 4 HOH A 31 531 289 HOH HOH . J 4 HOH A 32 532 203 HOH HOH . J 4 HOH A 33 533 83 HOH HOH . J 4 HOH A 34 534 283 HOH HOH . J 4 HOH A 35 535 71 HOH HOH . J 4 HOH A 36 536 320 HOH HOH . J 4 HOH A 37 537 213 HOH HOH . J 4 HOH A 38 538 78 HOH HOH . J 4 HOH A 39 539 75 HOH HOH . J 4 HOH A 40 540 105 HOH HOH . J 4 HOH A 41 541 216 HOH HOH . J 4 HOH A 42 542 84 HOH HOH . J 4 HOH A 43 543 97 HOH HOH . J 4 HOH A 44 544 149 HOH HOH . J 4 HOH A 45 545 124 HOH HOH . J 4 HOH A 46 546 244 HOH HOH . J 4 HOH A 47 547 202 HOH HOH . J 4 HOH A 48 548 255 HOH HOH . J 4 HOH A 49 549 250 HOH HOH . J 4 HOH A 50 550 256 HOH HOH . J 4 HOH A 51 551 111 HOH HOH . J 4 HOH A 52 552 301 HOH HOH . J 4 HOH A 53 553 96 HOH HOH . J 4 HOH A 54 554 81 HOH HOH . J 4 HOH A 55 555 187 HOH HOH . J 4 HOH A 56 556 2 HOH HOH . J 4 HOH A 57 557 117 HOH HOH . J 4 HOH A 58 558 112 HOH HOH . J 4 HOH A 59 559 241 HOH HOH . J 4 HOH A 60 560 140 HOH HOH . J 4 HOH A 61 561 246 HOH HOH . J 4 HOH A 62 562 93 HOH HOH . J 4 HOH A 63 563 106 HOH HOH . J 4 HOH A 64 564 92 HOH HOH . J 4 HOH A 65 565 98 HOH HOH . J 4 HOH A 66 566 198 HOH HOH . J 4 HOH A 67 567 323 HOH HOH . J 4 HOH A 68 568 108 HOH HOH . J 4 HOH A 69 569 179 HOH HOH . J 4 HOH A 70 570 252 HOH HOH . J 4 HOH A 71 571 155 HOH HOH . J 4 HOH A 72 572 303 HOH HOH . J 4 HOH A 73 573 100 HOH HOH . J 4 HOH A 74 574 68 HOH HOH . J 4 HOH A 75 575 135 HOH HOH . J 4 HOH A 76 576 104 HOH HOH . J 4 HOH A 77 577 91 HOH HOH . J 4 HOH A 78 578 288 HOH HOH . J 4 HOH A 79 579 164 HOH HOH . J 4 HOH A 80 580 271 HOH HOH . J 4 HOH A 81 581 99 HOH HOH . J 4 HOH A 82 582 260 HOH HOH . J 4 HOH A 83 583 317 HOH HOH . J 4 HOH A 84 584 119 HOH HOH . J 4 HOH A 85 585 125 HOH HOH . J 4 HOH A 86 586 233 HOH HOH . J 4 HOH A 87 587 338 HOH HOH . J 4 HOH A 88 588 110 HOH HOH . J 4 HOH A 89 589 128 HOH HOH . J 4 HOH A 90 590 171 HOH HOH . J 4 HOH A 91 591 319 HOH HOH . J 4 HOH A 92 592 227 HOH HOH . J 4 HOH A 93 593 156 HOH HOH . J 4 HOH A 94 594 77 HOH HOH . J 4 HOH A 95 595 350 HOH HOH . J 4 HOH A 96 596 159 HOH HOH . J 4 HOH A 97 597 157 HOH HOH . J 4 HOH A 98 598 208 HOH HOH . J 4 HOH A 99 599 127 HOH HOH . J 4 HOH A 100 600 309 HOH HOH . J 4 HOH A 101 601 109 HOH HOH . J 4 HOH A 102 602 132 HOH HOH . J 4 HOH A 103 603 102 HOH HOH . J 4 HOH A 104 604 238 HOH HOH . J 4 HOH A 105 605 121 HOH HOH . J 4 HOH A 106 606 337 HOH HOH . J 4 HOH A 107 607 88 HOH HOH . J 4 HOH A 108 608 9 HOH HOH . J 4 HOH A 109 609 225 HOH HOH . J 4 HOH A 110 610 254 HOH HOH . J 4 HOH A 111 611 359 HOH HOH . J 4 HOH A 112 612 80 HOH HOH . J 4 HOH A 113 613 120 HOH HOH . J 4 HOH A 114 614 1 HOH HOH . J 4 HOH A 115 615 113 HOH HOH . J 4 HOH A 116 616 353 HOH HOH . J 4 HOH A 117 617 122 HOH HOH . J 4 HOH A 118 618 16 HOH HOH . J 4 HOH A 119 619 115 HOH HOH . J 4 HOH A 120 620 130 HOH HOH . J 4 HOH A 121 621 207 HOH HOH . J 4 HOH A 122 622 341 HOH HOH . J 4 HOH A 123 623 136 HOH HOH . J 4 HOH A 124 624 196 HOH HOH . J 4 HOH A 125 625 126 HOH HOH . J 4 HOH A 126 626 123 HOH HOH . J 4 HOH A 127 627 116 HOH HOH . J 4 HOH A 128 628 180 HOH HOH . J 4 HOH A 129 629 194 HOH HOH . J 4 HOH A 130 630 139 HOH HOH . J 4 HOH A 131 631 335 HOH HOH . J 4 HOH A 132 632 344 HOH HOH . J 4 HOH A 133 633 251 HOH HOH . J 4 HOH A 134 634 151 HOH HOH . J 4 HOH A 135 635 262 HOH HOH . J 4 HOH A 136 636 346 HOH HOH . J 4 HOH A 137 637 169 HOH HOH . J 4 HOH A 138 638 173 HOH HOH . J 4 HOH A 139 639 214 HOH HOH . J 4 HOH A 140 640 129 HOH HOH . J 4 HOH A 141 641 205 HOH HOH . J 4 HOH A 142 642 355 HOH HOH . J 4 HOH A 143 643 294 HOH HOH . J 4 HOH A 144 644 15 HOH HOH . J 4 HOH A 145 645 141 HOH HOH . J 4 HOH A 146 646 131 HOH HOH . J 4 HOH A 147 647 143 HOH HOH . J 4 HOH A 148 648 339 HOH HOH . J 4 HOH A 149 649 286 HOH HOH . J 4 HOH A 150 650 352 HOH HOH . J 4 HOH A 151 651 185 HOH HOH . J 4 HOH A 152 652 267 HOH HOH . J 4 HOH A 153 653 240 HOH HOH . J 4 HOH A 154 654 142 HOH HOH . J 4 HOH A 155 655 310 HOH HOH . J 4 HOH A 156 656 163 HOH HOH . J 4 HOH A 157 657 357 HOH HOH . J 4 HOH A 158 658 284 HOH HOH . J 4 HOH A 159 659 329 HOH HOH . J 4 HOH A 160 660 351 HOH HOH . J 4 HOH A 161 661 13 HOH HOH . J 4 HOH A 162 662 145 HOH HOH . J 4 HOH A 163 663 366 HOH HOH . J 4 HOH A 164 664 192 HOH HOH . J 4 HOH A 165 665 204 HOH HOH . J 4 HOH A 166 666 342 HOH HOH . J 4 HOH A 167 667 18 HOH HOH . J 4 HOH A 168 668 367 HOH HOH . J 4 HOH A 169 669 358 HOH HOH . J 4 HOH A 170 670 360 HOH HOH . J 4 HOH A 171 671 146 HOH HOH . J 4 HOH A 172 672 144 HOH HOH . J 4 HOH A 173 673 150 HOH HOH . J 4 HOH A 174 674 361 HOH HOH . J 4 HOH A 175 675 191 HOH HOH . J 4 HOH A 176 676 291 HOH HOH . J 4 HOH A 177 677 287 HOH HOH . J 4 HOH A 178 678 345 HOH HOH . K 4 HOH B 1 501 347 HOH HOH . K 4 HOH B 2 502 188 HOH HOH . K 4 HOH B 3 503 336 HOH HOH . K 4 HOH B 4 504 21 HOH HOH . K 4 HOH B 5 505 348 HOH HOH . K 4 HOH B 6 506 242 HOH HOH . K 4 HOH B 7 507 201 HOH HOH . K 4 HOH B 8 508 34 HOH HOH . K 4 HOH B 9 509 296 HOH HOH . K 4 HOH B 10 510 14 HOH HOH . K 4 HOH B 11 511 22 HOH HOH . K 4 HOH B 12 512 368 HOH HOH . K 4 HOH B 13 513 190 HOH HOH . K 4 HOH B 14 514 27 HOH HOH . K 4 HOH B 15 515 332 HOH HOH . K 4 HOH B 16 516 44 HOH HOH . K 4 HOH B 17 517 20 HOH HOH . K 4 HOH B 18 518 25 HOH HOH . K 4 HOH B 19 519 167 HOH HOH . K 4 HOH B 20 520 30 HOH HOH . K 4 HOH B 21 521 28 HOH HOH . K 4 HOH B 22 522 48 HOH HOH . K 4 HOH B 23 523 261 HOH HOH . K 4 HOH B 24 524 334 HOH HOH . K 4 HOH B 25 525 118 HOH HOH . K 4 HOH B 26 526 29 HOH HOH . K 4 HOH B 27 527 59 HOH HOH . K 4 HOH B 28 528 268 HOH HOH . K 4 HOH B 29 529 43 HOH HOH . K 4 HOH B 30 530 212 HOH HOH . K 4 HOH B 31 531 37 HOH HOH . K 4 HOH B 32 532 331 HOH HOH . K 4 HOH B 33 533 60 HOH HOH . K 4 HOH B 34 534 33 HOH HOH . K 4 HOH B 35 535 36 HOH HOH . K 4 HOH B 36 536 101 HOH HOH . K 4 HOH B 37 537 50 HOH HOH . K 4 HOH B 38 538 45 HOH HOH . K 4 HOH B 39 539 168 HOH HOH . K 4 HOH B 40 540 41 HOH HOH . K 4 HOH B 41 541 226 HOH HOH . K 4 HOH B 42 542 160 HOH HOH . K 4 HOH B 43 543 318 HOH HOH . K 4 HOH B 44 544 42 HOH HOH . K 4 HOH B 45 545 297 HOH HOH . K 4 HOH B 46 546 46 HOH HOH . K 4 HOH B 47 547 193 HOH HOH . K 4 HOH B 48 548 32 HOH HOH . K 4 HOH B 49 549 162 HOH HOH . K 4 HOH B 50 550 7 HOH HOH . K 4 HOH B 51 551 40 HOH HOH . K 4 HOH B 52 552 58 HOH HOH . K 4 HOH B 53 553 51 HOH HOH . K 4 HOH B 54 554 61 HOH HOH . K 4 HOH B 55 555 62 HOH HOH . K 4 HOH B 56 556 172 HOH HOH . K 4 HOH B 57 557 264 HOH HOH . K 4 HOH B 58 558 95 HOH HOH . K 4 HOH B 59 559 55 HOH HOH . K 4 HOH B 60 560 166 HOH HOH . K 4 HOH B 61 561 235 HOH HOH . K 4 HOH B 62 562 234 HOH HOH . K 4 HOH B 63 563 292 HOH HOH . K 4 HOH B 64 564 66 HOH HOH . K 4 HOH B 65 565 31 HOH HOH . K 4 HOH B 66 566 57 HOH HOH . K 4 HOH B 67 567 90 HOH HOH . K 4 HOH B 68 568 49 HOH HOH . K 4 HOH B 69 569 64 HOH HOH . K 4 HOH B 70 570 200 HOH HOH . K 4 HOH B 71 571 54 HOH HOH . K 4 HOH B 72 572 218 HOH HOH . K 4 HOH B 73 573 315 HOH HOH . K 4 HOH B 74 574 47 HOH HOH . K 4 HOH B 75 575 232 HOH HOH . K 4 HOH B 76 576 38 HOH HOH . K 4 HOH B 77 577 178 HOH HOH . K 4 HOH B 78 578 52 HOH HOH . K 4 HOH B 79 579 369 HOH HOH . K 4 HOH B 80 580 364 HOH HOH . K 4 HOH B 81 581 5 HOH HOH . K 4 HOH B 82 582 3 HOH HOH . K 4 HOH B 83 583 209 HOH HOH . K 4 HOH B 84 584 152 HOH HOH . K 4 HOH B 85 585 363 HOH HOH . K 4 HOH B 86 586 371 HOH HOH . K 4 HOH B 87 587 362 HOH HOH . K 4 HOH B 88 588 67 HOH HOH . K 4 HOH B 89 589 333 HOH HOH . K 4 HOH B 90 590 298 HOH HOH . K 4 HOH B 91 591 314 HOH HOH . K 4 HOH B 92 592 277 HOH HOH . K 4 HOH B 93 593 176 HOH HOH . K 4 HOH B 94 594 219 HOH HOH . K 4 HOH B 95 595 65 HOH HOH . K 4 HOH B 96 596 35 HOH HOH . K 4 HOH B 97 597 248 HOH HOH . K 4 HOH B 98 598 274 HOH HOH . K 4 HOH B 99 599 370 HOH HOH . K 4 HOH B 100 600 276 HOH HOH . K 4 HOH B 101 601 199 HOH HOH . K 4 HOH B 102 602 328 HOH HOH . K 4 HOH B 103 603 365 HOH HOH . K 4 HOH B 104 604 69 HOH HOH . K 4 HOH B 105 605 245 HOH HOH . K 4 HOH B 106 606 247 HOH HOH . K 4 HOH B 107 607 356 HOH HOH . K 4 HOH B 108 608 211 HOH HOH . K 4 HOH B 109 609 39 HOH HOH . K 4 HOH B 110 610 327 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . H 2 -6.322 4.003 11.919 1 51.25 ? S DMS 402 B 1 HETATM 2 O O DMS . . . H 2 -7.543 3.297 11.423 1 51.82 ? O DMS 402 B 1 HETATM 3 C C1 DMS . . . H 2 -6.7 5.71 11.779 1 51.16 ? C1 DMS 402 B 1 HETATM 4 C C2 DMS . . . H 2 -5.112 3.871 10.652 1 50.96 ? C2 DMS 402 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 648 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #