data_7GK1
#
_model_server_result.job_id            UAm6VNuocfSiLsQq1SZfvA 
_model_server_result.datetime_utc      '2024-11-21 09:10:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7gk1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    7GK1 
#
_exptl.entry_id    7GK1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7GK1 
_cell.length_a            67.062 
_cell.length_b            98.646 
_cell.length_c            103.045 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7GK1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7GK1 
_atom_sites.fract_transf_matrix[1][1]    0.014912 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010137 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009704 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DMS A 1 401 402 DMS DMS . 
D 2 DMS A 1 402 403 DMS DMS . 
E 2 DMS A 1 403 406 DMS DMS . 
F 2 DMS A 1 404 407 DMS DMS . 
G 2 DMS A 1 405 408 DMS DMS . 
H 3 CL A 1 406 409 CL CL . 
I 4 QSF A 1 407 501 QSF LIG . 
J 2 DMS B 1 401 401 DMS DMS . 
K 2 DMS B 1 402 401 DMS DMS . 
L 2 DMS B 1 403 402 DMS DMS . 
M 2 DMS B 1 404 403 DMS DMS . 
N 5 HOH A 1 501 327 HOH HOH . 
N 5 HOH A 2 502 204 HOH HOH . 
N 5 HOH A 3 503 68 HOH HOH . 
N 5 HOH A 4 504 244 HOH HOH . 
N 5 HOH A 5 505 71 HOH HOH . 
N 5 HOH A 6 506 175 HOH HOH . 
N 5 HOH A 7 507 74 HOH HOH . 
N 5 HOH A 8 508 233 HOH HOH . 
N 5 HOH A 9 509 271 HOH HOH . 
N 5 HOH A 10 510 224 HOH HOH . 
N 5 HOH A 11 511 315 HOH HOH . 
N 5 HOH A 12 512 64 HOH HOH . 
N 5 HOH A 13 513 66 HOH HOH . 
N 5 HOH A 14 514 97 HOH HOH . 
N 5 HOH A 15 515 251 HOH HOH . 
N 5 HOH A 16 516 79 HOH HOH . 
N 5 HOH A 17 517 81 HOH HOH . 
N 5 HOH A 18 518 70 HOH HOH . 
N 5 HOH A 19 519 143 HOH HOH . 
N 5 HOH A 20 520 76 HOH HOH . 
N 5 HOH A 21 521 131 HOH HOH . 
N 5 HOH A 22 522 303 HOH HOH . 
N 5 HOH A 23 523 77 HOH HOH . 
N 5 HOH A 24 524 220 HOH HOH . 
N 5 HOH A 25 525 86 HOH HOH . 
N 5 HOH A 26 526 168 HOH HOH . 
N 5 HOH A 27 527 221 HOH HOH . 
N 5 HOH A 28 528 99 HOH HOH . 
N 5 HOH A 29 529 75 HOH HOH . 
N 5 HOH A 30 530 84 HOH HOH . 
N 5 HOH A 31 531 73 HOH HOH . 
N 5 HOH A 32 532 100 HOH HOH . 
N 5 HOH A 33 533 199 HOH HOH . 
N 5 HOH A 34 534 187 HOH HOH . 
N 5 HOH A 35 535 78 HOH HOH . 
N 5 HOH A 36 536 89 HOH HOH . 
N 5 HOH A 37 537 273 HOH HOH . 
N 5 HOH A 38 538 106 HOH HOH . 
N 5 HOH A 39 539 111 HOH HOH . 
N 5 HOH A 40 540 103 HOH HOH . 
N 5 HOH A 41 541 215 HOH HOH . 
N 5 HOH A 42 542 6 HOH HOH . 
N 5 HOH A 43 543 334 HOH HOH . 
N 5 HOH A 44 544 186 HOH HOH . 
N 5 HOH A 45 545 1 HOH HOH . 
N 5 HOH A 46 546 109 HOH HOH . 
N 5 HOH A 47 547 3 HOH HOH . 
N 5 HOH A 48 548 274 HOH HOH . 
N 5 HOH A 49 549 117 HOH HOH . 
N 5 HOH A 50 550 49 HOH HOH . 
N 5 HOH A 51 551 98 HOH HOH . 
N 5 HOH A 52 552 196 HOH HOH . 
N 5 HOH A 53 553 88 HOH HOH . 
N 5 HOH A 54 554 330 HOH HOH . 
N 5 HOH A 55 555 193 HOH HOH . 
N 5 HOH A 56 556 305 HOH HOH . 
N 5 HOH A 57 557 61 HOH HOH . 
N 5 HOH A 58 558 128 HOH HOH . 
N 5 HOH A 59 559 92 HOH HOH . 
N 5 HOH A 60 560 227 HOH HOH . 
N 5 HOH A 61 561 202 HOH HOH . 
N 5 HOH A 62 562 241 HOH HOH . 
N 5 HOH A 63 563 91 HOH HOH . 
N 5 HOH A 64 564 243 HOH HOH . 
N 5 HOH A 65 565 83 HOH HOH . 
N 5 HOH A 66 566 104 HOH HOH . 
N 5 HOH A 67 567 250 HOH HOH . 
N 5 HOH A 68 568 72 HOH HOH . 
N 5 HOH A 69 569 67 HOH HOH . 
N 5 HOH A 70 570 140 HOH HOH . 
N 5 HOH A 71 571 270 HOH HOH . 
N 5 HOH A 72 572 237 HOH HOH . 
N 5 HOH A 73 573 153 HOH HOH . 
N 5 HOH A 74 574 113 HOH HOH . 
N 5 HOH A 75 575 85 HOH HOH . 
N 5 HOH A 76 576 105 HOH HOH . 
N 5 HOH A 77 577 262 HOH HOH . 
N 5 HOH A 78 578 102 HOH HOH . 
N 5 HOH A 79 579 249 HOH HOH . 
N 5 HOH A 80 580 310 HOH HOH . 
N 5 HOH A 81 581 112 HOH HOH . 
N 5 HOH A 82 582 90 HOH HOH . 
N 5 HOH A 83 583 172 HOH HOH . 
N 5 HOH A 84 584 222 HOH HOH . 
N 5 HOH A 85 585 120 HOH HOH . 
N 5 HOH A 86 586 96 HOH HOH . 
N 5 HOH A 87 587 296 HOH HOH . 
N 5 HOH A 88 588 147 HOH HOH . 
N 5 HOH A 89 589 80 HOH HOH . 
N 5 HOH A 90 590 69 HOH HOH . 
N 5 HOH A 91 591 12 HOH HOH . 
N 5 HOH A 92 592 287 HOH HOH . 
N 5 HOH A 93 593 87 HOH HOH . 
N 5 HOH A 94 594 82 HOH HOH . 
N 5 HOH A 95 595 7 HOH HOH . 
N 5 HOH A 96 596 229 HOH HOH . 
N 5 HOH A 97 597 124 HOH HOH . 
N 5 HOH A 98 598 142 HOH HOH . 
N 5 HOH A 99 599 108 HOH HOH . 
N 5 HOH A 100 600 219 HOH HOH . 
N 5 HOH A 101 601 304 HOH HOH . 
N 5 HOH A 102 602 114 HOH HOH . 
N 5 HOH A 103 603 160 HOH HOH . 
N 5 HOH A 104 604 132 HOH HOH . 
N 5 HOH A 105 605 115 HOH HOH . 
N 5 HOH A 106 606 339 HOH HOH . 
N 5 HOH A 107 607 126 HOH HOH . 
N 5 HOH A 108 608 182 HOH HOH . 
N 5 HOH A 109 609 158 HOH HOH . 
N 5 HOH A 110 610 101 HOH HOH . 
N 5 HOH A 111 611 94 HOH HOH . 
N 5 HOH A 112 612 122 HOH HOH . 
N 5 HOH A 113 613 288 HOH HOH . 
N 5 HOH A 114 614 214 HOH HOH . 
N 5 HOH A 115 615 121 HOH HOH . 
N 5 HOH A 116 616 325 HOH HOH . 
N 5 HOH A 117 617 206 HOH HOH . 
N 5 HOH A 118 618 116 HOH HOH . 
N 5 HOH A 119 619 321 HOH HOH . 
N 5 HOH A 120 620 119 HOH HOH . 
N 5 HOH A 121 621 312 HOH HOH . 
N 5 HOH A 122 622 145 HOH HOH . 
N 5 HOH A 123 623 144 HOH HOH . 
N 5 HOH A 124 624 130 HOH HOH . 
N 5 HOH A 125 625 230 HOH HOH . 
N 5 HOH A 126 626 148 HOH HOH . 
N 5 HOH A 127 627 127 HOH HOH . 
N 5 HOH A 128 628 300 HOH HOH . 
N 5 HOH A 129 629 13 HOH HOH . 
N 5 HOH A 130 630 129 HOH HOH . 
N 5 HOH A 131 631 341 HOH HOH . 
N 5 HOH A 132 632 320 HOH HOH . 
N 5 HOH A 133 633 173 HOH HOH . 
N 5 HOH A 134 634 180 HOH HOH . 
N 5 HOH A 135 635 178 HOH HOH . 
N 5 HOH A 136 636 324 HOH HOH . 
N 5 HOH A 137 637 331 HOH HOH . 
N 5 HOH A 138 638 107 HOH HOH . 
N 5 HOH A 139 639 184 HOH HOH . 
N 5 HOH A 140 640 247 HOH HOH . 
N 5 HOH A 141 641 338 HOH HOH . 
N 5 HOH A 142 642 11 HOH HOH . 
N 5 HOH A 143 643 123 HOH HOH . 
N 5 HOH A 144 644 190 HOH HOH . 
N 5 HOH A 145 645 297 HOH HOH . 
N 5 HOH A 146 646 306 HOH HOH . 
N 5 HOH A 147 647 236 HOH HOH . 
N 5 HOH A 148 648 189 HOH HOH . 
N 5 HOH A 149 649 134 HOH HOH . 
N 5 HOH A 150 650 286 HOH HOH . 
N 5 HOH A 151 651 192 HOH HOH . 
N 5 HOH A 152 652 326 HOH HOH . 
N 5 HOH A 153 653 322 HOH HOH . 
N 5 HOH A 154 654 135 HOH HOH . 
N 5 HOH A 155 655 267 HOH HOH . 
N 5 HOH A 156 656 136 HOH HOH . 
N 5 HOH A 157 657 283 HOH HOH . 
N 5 HOH A 158 658 152 HOH HOH . 
N 5 HOH A 159 659 138 HOH HOH . 
N 5 HOH A 160 660 177 HOH HOH . 
N 5 HOH A 161 661 307 HOH HOH . 
N 5 HOH A 162 662 9 HOH HOH . 
N 5 HOH A 163 663 137 HOH HOH . 
N 5 HOH A 164 664 141 HOH HOH . 
N 5 HOH A 165 665 342 HOH HOH . 
N 5 HOH A 166 666 139 HOH HOH . 
N 5 HOH A 167 667 8 HOH HOH . 
N 5 HOH A 168 668 252 HOH HOH . 
N 5 HOH A 169 669 323 HOH HOH . 
N 5 HOH A 170 670 340 HOH HOH . 
O 5 HOH B 1 501 42 HOH HOH . 
O 5 HOH B 2 502 15 HOH HOH . 
O 5 HOH B 3 503 293 HOH HOH . 
O 5 HOH B 4 504 28 HOH HOH . 
O 5 HOH B 5 505 314 HOH HOH . 
O 5 HOH B 6 506 38 HOH HOH . 
O 5 HOH B 7 507 268 HOH HOH . 
O 5 HOH B 8 508 37 HOH HOH . 
O 5 HOH B 9 509 295 HOH HOH . 
O 5 HOH B 10 510 290 HOH HOH . 
O 5 HOH B 11 511 110 HOH HOH . 
O 5 HOH B 12 512 16 HOH HOH . 
O 5 HOH B 13 513 47 HOH HOH . 
O 5 HOH B 14 514 151 HOH HOH . 
O 5 HOH B 15 515 14 HOH HOH . 
O 5 HOH B 16 516 39 HOH HOH . 
O 5 HOH B 17 517 27 HOH HOH . 
O 5 HOH B 18 518 223 HOH HOH . 
O 5 HOH B 19 519 30 HOH HOH . 
O 5 HOH B 20 520 149 HOH HOH . 
O 5 HOH B 21 521 277 HOH HOH . 
O 5 HOH B 22 522 22 HOH HOH . 
O 5 HOH B 23 523 19 HOH HOH . 
O 5 HOH B 24 524 176 HOH HOH . 
O 5 HOH B 25 525 155 HOH HOH . 
O 5 HOH B 26 526 179 HOH HOH . 
O 5 HOH B 27 527 20 HOH HOH . 
O 5 HOH B 28 528 24 HOH HOH . 
O 5 HOH B 29 529 93 HOH HOH . 
O 5 HOH B 30 530 31 HOH HOH . 
O 5 HOH B 31 531 21 HOH HOH . 
O 5 HOH B 32 532 34 HOH HOH . 
O 5 HOH B 33 533 228 HOH HOH . 
O 5 HOH B 34 534 35 HOH HOH . 
O 5 HOH B 35 535 319 HOH HOH . 
O 5 HOH B 36 536 17 HOH HOH . 
O 5 HOH B 37 537 23 HOH HOH . 
O 5 HOH B 38 538 328 HOH HOH . 
O 5 HOH B 39 539 44 HOH HOH . 
O 5 HOH B 40 540 201 HOH HOH . 
O 5 HOH B 41 541 45 HOH HOH . 
O 5 HOH B 42 542 294 HOH HOH . 
O 5 HOH B 43 543 235 HOH HOH . 
O 5 HOH B 44 544 57 HOH HOH . 
O 5 HOH B 45 545 157 HOH HOH . 
O 5 HOH B 46 546 156 HOH HOH . 
O 5 HOH B 47 547 36 HOH HOH . 
O 5 HOH B 48 548 5 HOH HOH . 
O 5 HOH B 49 549 41 HOH HOH . 
O 5 HOH B 50 550 211 HOH HOH . 
O 5 HOH B 51 551 32 HOH HOH . 
O 5 HOH B 52 552 256 HOH HOH . 
O 5 HOH B 53 553 161 HOH HOH . 
O 5 HOH B 54 554 210 HOH HOH . 
O 5 HOH B 55 555 51 HOH HOH . 
O 5 HOH B 56 556 225 HOH HOH . 
O 5 HOH B 57 557 231 HOH HOH . 
O 5 HOH B 58 558 185 HOH HOH . 
O 5 HOH B 59 559 43 HOH HOH . 
O 5 HOH B 60 560 329 HOH HOH . 
O 5 HOH B 61 561 25 HOH HOH . 
O 5 HOH B 62 562 52 HOH HOH . 
O 5 HOH B 63 563 54 HOH HOH . 
O 5 HOH B 64 564 200 HOH HOH . 
O 5 HOH B 65 565 60 HOH HOH . 
O 5 HOH B 66 566 159 HOH HOH . 
O 5 HOH B 67 567 181 HOH HOH . 
O 5 HOH B 68 568 48 HOH HOH . 
O 5 HOH B 69 569 292 HOH HOH . 
O 5 HOH B 70 570 279 HOH HOH . 
O 5 HOH B 71 571 46 HOH HOH . 
O 5 HOH B 72 572 59 HOH HOH . 
O 5 HOH B 73 573 125 HOH HOH . 
O 5 HOH B 74 574 29 HOH HOH . 
O 5 HOH B 75 575 212 HOH HOH . 
O 5 HOH B 76 576 2 HOH HOH . 
O 5 HOH B 77 577 53 HOH HOH . 
O 5 HOH B 78 578 62 HOH HOH . 
O 5 HOH B 79 579 302 HOH HOH . 
O 5 HOH B 80 580 265 HOH HOH . 
O 5 HOH B 81 581 257 HOH HOH . 
O 5 HOH B 82 582 253 HOH HOH . 
O 5 HOH B 83 583 335 HOH HOH . 
O 5 HOH B 84 584 213 HOH HOH . 
O 5 HOH B 85 585 318 HOH HOH . 
O 5 HOH B 86 586 165 HOH HOH . 
O 5 HOH B 87 587 4 HOH HOH . 
O 5 HOH B 88 588 333 HOH HOH . 
O 5 HOH B 89 589 280 HOH HOH . 
O 5 HOH B 90 590 332 HOH HOH . 
O 5 HOH B 91 591 58 HOH HOH . 
O 5 HOH B 92 592 336 HOH HOH . 
O 5 HOH B 93 593 240 HOH HOH . 
O 5 HOH B 94 594 33 HOH HOH . 
O 5 HOH B 95 595 337 HOH HOH . 
O 5 HOH B 96 596 203 HOH HOH . 
O 5 HOH B 97 597 238 HOH HOH . 
O 5 HOH B 98 598 258 HOH HOH . 
O 5 HOH B 99 599 194 HOH HOH . 
O 5 HOH B 100 600 246 HOH HOH . 
O 5 HOH B 101 601 317 HOH HOH . 
O 5 HOH B 102 602 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 2 -18.673 6.101 34.339 1 58.35 ? S DMS 402 A 1 
HETATM 2 O O DMS . . . D 2 -19.334 5.956 33.021 1 58.54 ? O DMS 402 A 1 
HETATM 3 C C1 DMS . . . D 2 -19.974 5.888 35.511 1 58.06 ? C1 DMS 402 A 1 
HETATM 4 C C2 DMS . . . D 2 -18.44 7.845 34.537 1 58.32 ? C2 DMS 402 A 1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           4 
#