data_7GKE # _model_server_result.job_id CoB6rZKDZKLjPSLAWghItg _model_server_result.datetime_utc '2024-11-09 02:48:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gke # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 7GKE # _exptl.entry_id 7GKE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GKE _cell.length_a 67.34 _cell.length_b 99.18 _cell.length_c 103.46 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GKE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 K N N ? 2 L N N ? 2 N N N ? 2 O N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GKE _atom_sites.fract_transf_matrix[1][1] 0.01485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010083 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 401 401 DMS DMS . D 2 DMS A 1 402 402 DMS DMS . E 2 DMS A 1 403 403 DMS DMS . F 2 DMS A 1 404 406 DMS DMS . G 2 DMS A 1 405 407 DMS DMS . H 2 DMS A 1 406 408 DMS DMS . I 3 CL A 1 407 409 CL CL . J 4 QW1 A 1 408 501 QW1 LIG . K 2 DMS B 1 401 401 DMS DMS . L 2 DMS B 1 402 402 DMS DMS . M 4 QW1 B 1 403 501 QW1 LIG . N 2 DMS B 1 404 502 DMS DMS . O 2 DMS B 1 405 503 DMS DMS . P 5 HOH A 1 501 242 HOH HOH . P 5 HOH A 2 502 328 HOH HOH . P 5 HOH A 3 503 204 HOH HOH . P 5 HOH A 4 504 284 HOH HOH . P 5 HOH A 5 505 170 HOH HOH . P 5 HOH A 6 506 166 HOH HOH . P 5 HOH A 7 507 66 HOH HOH . P 5 HOH A 8 508 68 HOH HOH . P 5 HOH A 9 509 143 HOH HOH . P 5 HOH A 10 510 99 HOH HOH . P 5 HOH A 11 511 74 HOH HOH . P 5 HOH A 12 512 303 HOH HOH . P 5 HOH A 13 513 67 HOH HOH . P 5 HOH A 14 514 6 HOH HOH . P 5 HOH A 15 515 264 HOH HOH . P 5 HOH A 16 516 100 HOH HOH . P 5 HOH A 17 517 81 HOH HOH . P 5 HOH A 18 518 251 HOH HOH . P 5 HOH A 19 519 175 HOH HOH . P 5 HOH A 20 520 75 HOH HOH . P 5 HOH A 21 521 70 HOH HOH . P 5 HOH A 22 522 217 HOH HOH . P 5 HOH A 23 523 199 HOH HOH . P 5 HOH A 24 524 76 HOH HOH . P 5 HOH A 25 525 224 HOH HOH . P 5 HOH A 26 526 56 HOH HOH . P 5 HOH A 27 527 109 HOH HOH . P 5 HOH A 28 528 64 HOH HOH . P 5 HOH A 29 529 221 HOH HOH . P 5 HOH A 30 530 78 HOH HOH . P 5 HOH A 31 531 233 HOH HOH . P 5 HOH A 32 532 310 HOH HOH . P 5 HOH A 33 533 8 HOH HOH . P 5 HOH A 34 534 3 HOH HOH . P 5 HOH A 35 535 162 HOH HOH . P 5 HOH A 36 536 316 HOH HOH . P 5 HOH A 37 537 71 HOH HOH . P 5 HOH A 38 538 97 HOH HOH . P 5 HOH A 39 539 273 HOH HOH . P 5 HOH A 40 540 244 HOH HOH . P 5 HOH A 41 541 250 HOH HOH . P 5 HOH A 42 542 73 HOH HOH . P 5 HOH A 43 543 92 HOH HOH . P 5 HOH A 44 544 223 HOH HOH . P 5 HOH A 45 545 227 HOH HOH . P 5 HOH A 46 546 186 HOH HOH . P 5 HOH A 47 547 104 HOH HOH . P 5 HOH A 48 548 79 HOH HOH . P 5 HOH A 49 549 187 HOH HOH . P 5 HOH A 50 550 342 HOH HOH . P 5 HOH A 51 551 89 HOH HOH . P 5 HOH A 52 552 86 HOH HOH . P 5 HOH A 53 553 215 HOH HOH . P 5 HOH A 54 554 334 HOH HOH . P 5 HOH A 55 555 84 HOH HOH . P 5 HOH A 56 556 249 HOH HOH . P 5 HOH A 57 557 222 HOH HOH . P 5 HOH A 58 558 131 HOH HOH . P 5 HOH A 59 559 106 HOH HOH . P 5 HOH A 60 560 259 HOH HOH . P 5 HOH A 61 561 274 HOH HOH . P 5 HOH A 62 562 269 HOH HOH . P 5 HOH A 63 563 355 HOH HOH . P 5 HOH A 64 564 88 HOH HOH . P 5 HOH A 65 565 193 HOH HOH . P 5 HOH A 66 566 103 HOH HOH . P 5 HOH A 67 567 49 HOH HOH . P 5 HOH A 68 568 270 HOH HOH . P 5 HOH A 69 569 117 HOH HOH . P 5 HOH A 70 570 168 HOH HOH . P 5 HOH A 71 571 140 HOH HOH . P 5 HOH A 72 572 319 HOH HOH . P 5 HOH A 73 573 312 HOH HOH . P 5 HOH A 74 574 72 HOH HOH . P 5 HOH A 75 575 116 HOH HOH . P 5 HOH A 76 576 220 HOH HOH . P 5 HOH A 77 577 85 HOH HOH . P 5 HOH A 78 578 321 HOH HOH . P 5 HOH A 79 579 1 HOH HOH . P 5 HOH A 80 580 83 HOH HOH . P 5 HOH A 81 581 153 HOH HOH . P 5 HOH A 82 582 305 HOH HOH . P 5 HOH A 83 583 96 HOH HOH . P 5 HOH A 84 584 102 HOH HOH . P 5 HOH A 85 585 69 HOH HOH . P 5 HOH A 86 586 214 HOH HOH . P 5 HOH A 87 587 317 HOH HOH . P 5 HOH A 88 588 232 HOH HOH . P 5 HOH A 89 589 128 HOH HOH . P 5 HOH A 90 590 61 HOH HOH . P 5 HOH A 91 591 313 HOH HOH . P 5 HOH A 92 592 320 HOH HOH . P 5 HOH A 93 593 209 HOH HOH . P 5 HOH A 94 594 207 HOH HOH . P 5 HOH A 95 595 147 HOH HOH . P 5 HOH A 96 596 164 HOH HOH . P 5 HOH A 97 597 98 HOH HOH . P 5 HOH A 98 598 124 HOH HOH . P 5 HOH A 99 599 111 HOH HOH . P 5 HOH A 100 600 288 HOH HOH . P 5 HOH A 101 601 90 HOH HOH . P 5 HOH A 102 602 115 HOH HOH . P 5 HOH A 103 603 145 HOH HOH . P 5 HOH A 104 604 125 HOH HOH . P 5 HOH A 105 605 336 HOH HOH . P 5 HOH A 106 606 113 HOH HOH . P 5 HOH A 107 607 120 HOH HOH . P 5 HOH A 108 608 202 HOH HOH . P 5 HOH A 109 609 105 HOH HOH . P 5 HOH A 110 610 196 HOH HOH . P 5 HOH A 111 611 300 HOH HOH . P 5 HOH A 112 612 77 HOH HOH . P 5 HOH A 113 613 80 HOH HOH . P 5 HOH A 114 614 263 HOH HOH . P 5 HOH A 115 615 190 HOH HOH . P 5 HOH A 116 616 107 HOH HOH . P 5 HOH A 117 617 262 HOH HOH . P 5 HOH A 118 618 160 HOH HOH . P 5 HOH A 119 619 119 HOH HOH . P 5 HOH A 120 620 172 HOH HOH . P 5 HOH A 121 621 150 HOH HOH . P 5 HOH A 122 622 296 HOH HOH . P 5 HOH A 123 623 122 HOH HOH . P 5 HOH A 124 624 229 HOH HOH . P 5 HOH A 125 625 130 HOH HOH . P 5 HOH A 126 626 304 HOH HOH . P 5 HOH A 127 627 287 HOH HOH . P 5 HOH A 128 628 108 HOH HOH . P 5 HOH A 129 629 114 HOH HOH . P 5 HOH A 130 630 101 HOH HOH . P 5 HOH A 131 631 158 HOH HOH . P 5 HOH A 132 632 148 HOH HOH . P 5 HOH A 133 633 12 HOH HOH . P 5 HOH A 134 634 13 HOH HOH . P 5 HOH A 135 635 94 HOH HOH . P 5 HOH A 136 636 182 HOH HOH . P 5 HOH A 137 637 126 HOH HOH . P 5 HOH A 138 638 236 HOH HOH . P 5 HOH A 139 639 121 HOH HOH . P 5 HOH A 140 640 118 HOH HOH . P 5 HOH A 141 641 7 HOH HOH . P 5 HOH A 142 642 127 HOH HOH . P 5 HOH A 143 643 243 HOH HOH . P 5 HOH A 144 644 142 HOH HOH . P 5 HOH A 145 645 314 HOH HOH . P 5 HOH A 146 646 112 HOH HOH . P 5 HOH A 147 647 146 HOH HOH . P 5 HOH A 148 648 191 HOH HOH . P 5 HOH A 149 649 322 HOH HOH . P 5 HOH A 150 650 230 HOH HOH . P 5 HOH A 151 651 343 HOH HOH . P 5 HOH A 152 652 132 HOH HOH . P 5 HOH A 153 653 129 HOH HOH . P 5 HOH A 154 654 346 HOH HOH . P 5 HOH A 155 655 189 HOH HOH . P 5 HOH A 156 656 197 HOH HOH . P 5 HOH A 157 657 180 HOH HOH . P 5 HOH A 158 658 338 HOH HOH . P 5 HOH A 159 659 40 HOH HOH . P 5 HOH A 160 660 11 HOH HOH . P 5 HOH A 161 661 134 HOH HOH . P 5 HOH A 162 662 123 HOH HOH . P 5 HOH A 163 663 206 HOH HOH . P 5 HOH A 164 664 315 HOH HOH . P 5 HOH A 165 665 349 HOH HOH . P 5 HOH A 166 666 331 HOH HOH . P 5 HOH A 167 667 289 HOH HOH . P 5 HOH A 168 668 286 HOH HOH . P 5 HOH A 169 669 173 HOH HOH . P 5 HOH A 170 670 58 HOH HOH . P 5 HOH A 171 671 337 HOH HOH . P 5 HOH A 172 672 192 HOH HOH . P 5 HOH A 173 673 345 HOH HOH . P 5 HOH A 174 674 178 HOH HOH . P 5 HOH A 175 675 247 HOH HOH . P 5 HOH A 176 676 152 HOH HOH . P 5 HOH A 177 677 306 HOH HOH . P 5 HOH A 178 678 297 HOH HOH . P 5 HOH A 179 679 318 HOH HOH . P 5 HOH A 180 680 311 HOH HOH . P 5 HOH A 181 681 136 HOH HOH . P 5 HOH A 182 682 184 HOH HOH . P 5 HOH A 183 683 335 HOH HOH . P 5 HOH A 184 684 245 HOH HOH . P 5 HOH A 185 685 135 HOH HOH . P 5 HOH A 186 686 340 HOH HOH . P 5 HOH A 187 687 333 HOH HOH . P 5 HOH A 188 688 348 HOH HOH . P 5 HOH A 189 689 137 HOH HOH . P 5 HOH A 190 690 9 HOH HOH . P 5 HOH A 191 691 307 HOH HOH . P 5 HOH A 192 692 283 HOH HOH . P 5 HOH A 193 693 267 HOH HOH . P 5 HOH A 194 694 139 HOH HOH . P 5 HOH A 195 695 252 HOH HOH . P 5 HOH A 196 696 330 HOH HOH . P 5 HOH A 197 697 138 HOH HOH . P 5 HOH A 198 698 141 HOH HOH . P 5 HOH A 199 699 177 HOH HOH . P 5 HOH A 200 700 248 HOH HOH . P 5 HOH A 201 701 332 HOH HOH . P 5 HOH A 202 702 339 HOH HOH . Q 5 HOH B 1 501 324 HOH HOH . Q 5 HOH B 2 502 341 HOH HOH . Q 5 HOH B 3 503 309 HOH HOH . Q 5 HOH B 4 504 18 HOH HOH . Q 5 HOH B 5 505 290 HOH HOH . Q 5 HOH B 6 506 295 HOH HOH . Q 5 HOH B 7 507 216 HOH HOH . Q 5 HOH B 8 508 268 HOH HOH . Q 5 HOH B 9 509 253 HOH HOH . Q 5 HOH B 10 510 323 HOH HOH . Q 5 HOH B 11 511 15 HOH HOH . Q 5 HOH B 12 512 55 HOH HOH . Q 5 HOH B 13 513 293 HOH HOH . Q 5 HOH B 14 514 176 HOH HOH . Q 5 HOH B 15 515 31 HOH HOH . Q 5 HOH B 16 516 38 HOH HOH . Q 5 HOH B 17 517 16 HOH HOH . Q 5 HOH B 18 518 53 HOH HOH . Q 5 HOH B 19 519 277 HOH HOH . Q 5 HOH B 20 520 22 HOH HOH . Q 5 HOH B 21 521 21 HOH HOH . Q 5 HOH B 22 522 278 HOH HOH . Q 5 HOH B 23 523 30 HOH HOH . Q 5 HOH B 24 524 35 HOH HOH . Q 5 HOH B 25 525 28 HOH HOH . Q 5 HOH B 26 526 228 HOH HOH . Q 5 HOH B 27 527 42 HOH HOH . Q 5 HOH B 28 528 37 HOH HOH . Q 5 HOH B 29 529 110 HOH HOH . Q 5 HOH B 30 530 179 HOH HOH . Q 5 HOH B 31 531 255 HOH HOH . Q 5 HOH B 32 532 2 HOH HOH . Q 5 HOH B 33 533 280 HOH HOH . Q 5 HOH B 34 534 24 HOH HOH . Q 5 HOH B 35 535 294 HOH HOH . Q 5 HOH B 36 536 156 HOH HOH . Q 5 HOH B 37 537 27 HOH HOH . Q 5 HOH B 38 538 26 HOH HOH . Q 5 HOH B 39 539 14 HOH HOH . Q 5 HOH B 40 540 93 HOH HOH . Q 5 HOH B 41 541 235 HOH HOH . Q 5 HOH B 42 542 19 HOH HOH . Q 5 HOH B 43 543 20 HOH HOH . Q 5 HOH B 44 544 23 HOH HOH . Q 5 HOH B 45 545 45 HOH HOH . Q 5 HOH B 46 546 39 HOH HOH . Q 5 HOH B 47 547 151 HOH HOH . Q 5 HOH B 48 548 256 HOH HOH . Q 5 HOH B 49 549 149 HOH HOH . Q 5 HOH B 50 550 157 HOH HOH . Q 5 HOH B 51 551 5 HOH HOH . Q 5 HOH B 52 552 347 HOH HOH . Q 5 HOH B 53 553 34 HOH HOH . Q 5 HOH B 54 554 44 HOH HOH . Q 5 HOH B 55 555 54 HOH HOH . Q 5 HOH B 56 556 225 HOH HOH . Q 5 HOH B 57 557 36 HOH HOH . Q 5 HOH B 58 558 200 HOH HOH . Q 5 HOH B 59 559 91 HOH HOH . Q 5 HOH B 60 560 25 HOH HOH . Q 5 HOH B 61 561 266 HOH HOH . Q 5 HOH B 62 562 57 HOH HOH . Q 5 HOH B 63 563 210 HOH HOH . Q 5 HOH B 64 564 352 HOH HOH . Q 5 HOH B 65 565 231 HOH HOH . Q 5 HOH B 66 566 41 HOH HOH . Q 5 HOH B 67 567 4 HOH HOH . Q 5 HOH B 68 568 185 HOH HOH . Q 5 HOH B 69 569 161 HOH HOH . Q 5 HOH B 70 570 211 HOH HOH . Q 5 HOH B 71 571 281 HOH HOH . Q 5 HOH B 72 572 87 HOH HOH . Q 5 HOH B 73 573 52 HOH HOH . Q 5 HOH B 74 574 155 HOH HOH . Q 5 HOH B 75 575 82 HOH HOH . Q 5 HOH B 76 576 181 HOH HOH . Q 5 HOH B 77 577 257 HOH HOH . Q 5 HOH B 78 578 51 HOH HOH . Q 5 HOH B 79 579 10 HOH HOH . Q 5 HOH B 80 580 213 HOH HOH . Q 5 HOH B 81 581 350 HOH HOH . Q 5 HOH B 82 582 32 HOH HOH . Q 5 HOH B 83 583 279 HOH HOH . Q 5 HOH B 84 584 356 HOH HOH . Q 5 HOH B 85 585 43 HOH HOH . Q 5 HOH B 86 586 48 HOH HOH . Q 5 HOH B 87 587 167 HOH HOH . Q 5 HOH B 88 588 201 HOH HOH . Q 5 HOH B 89 589 212 HOH HOH . Q 5 HOH B 90 590 46 HOH HOH . Q 5 HOH B 91 591 226 HOH HOH . Q 5 HOH B 92 592 326 HOH HOH . Q 5 HOH B 93 593 60 HOH HOH . Q 5 HOH B 94 594 159 HOH HOH . Q 5 HOH B 95 595 353 HOH HOH . Q 5 HOH B 96 596 165 HOH HOH . Q 5 HOH B 97 597 59 HOH HOH . Q 5 HOH B 98 598 291 HOH HOH . Q 5 HOH B 99 599 327 HOH HOH . Q 5 HOH B 100 600 265 HOH HOH . Q 5 HOH B 101 601 240 HOH HOH . Q 5 HOH B 102 602 254 HOH HOH . Q 5 HOH B 103 603 218 HOH HOH . Q 5 HOH B 104 604 325 HOH HOH . Q 5 HOH B 105 605 344 HOH HOH . Q 5 HOH B 106 606 238 HOH HOH . Q 5 HOH B 107 607 258 HOH HOH . Q 5 HOH B 108 608 351 HOH HOH . Q 5 HOH B 109 609 62 HOH HOH . Q 5 HOH B 110 610 354 HOH HOH . Q 5 HOH B 111 611 33 HOH HOH . Q 5 HOH B 112 612 194 HOH HOH . Q 5 HOH B 113 613 329 HOH HOH . Q 5 HOH B 114 614 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . F 2 0.418 -11.075 18.961 1 64.34 ? S DMS 404 A 1 HETATM 2 O O DMS . . . F 2 -0.062 -11.748 17.747 1 64.16 ? O DMS 404 A 1 HETATM 3 C C1 DMS . . . F 2 0.49 -12.283 20.252 1 64.52 ? C1 DMS 404 A 1 HETATM 4 C C2 DMS . . . F 2 -0.995 -10.306 19.623 1 64.32 ? C2 DMS 404 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #