data_7GNX # _model_server_result.job_id Yt8rJgcEQ0aUH4gYs-SiPw _model_server_result.datetime_utc '2024-10-12 19:23:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gnx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7GNX # _exptl.entry_id 7GNX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GNX _cell.length_a 42.782 _cell.length_b 62.645 _cell.length_c 147.611 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GNX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GNX _atom_sites.fract_transf_matrix[1][1] 0.023374 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ST0 A 1 201 201 ST0 LIG . D 3 DMS B 1 201 201 DMS DMS . E 4 HOH A 1 301 281 HOH HOH . E 4 HOH A 2 302 82 HOH HOH . E 4 HOH A 3 303 285 HOH HOH . E 4 HOH A 4 304 193 HOH HOH . E 4 HOH A 5 305 215 HOH HOH . E 4 HOH A 6 306 210 HOH HOH . E 4 HOH A 7 307 89 HOH HOH . E 4 HOH A 8 308 32 HOH HOH . E 4 HOH A 9 309 5 HOH HOH . E 4 HOH A 10 310 225 HOH HOH . E 4 HOH A 11 311 74 HOH HOH . E 4 HOH A 12 312 58 HOH HOH . E 4 HOH A 13 313 242 HOH HOH . E 4 HOH A 14 314 10 HOH HOH . E 4 HOH A 15 315 248 HOH HOH . E 4 HOH A 16 316 15 HOH HOH . E 4 HOH A 17 317 204 HOH HOH . E 4 HOH A 18 318 292 HOH HOH . E 4 HOH A 19 319 100 HOH HOH . E 4 HOH A 20 320 216 HOH HOH . E 4 HOH A 21 321 135 HOH HOH . E 4 HOH A 22 322 52 HOH HOH . E 4 HOH A 23 323 53 HOH HOH . E 4 HOH A 24 324 7 HOH HOH . E 4 HOH A 25 325 112 HOH HOH . E 4 HOH A 26 326 164 HOH HOH . E 4 HOH A 27 327 18 HOH HOH . E 4 HOH A 28 328 318 HOH HOH . E 4 HOH A 29 329 57 HOH HOH . E 4 HOH A 30 330 127 HOH HOH . E 4 HOH A 31 331 154 HOH HOH . E 4 HOH A 32 332 25 HOH HOH . E 4 HOH A 33 333 115 HOH HOH . E 4 HOH A 34 334 116 HOH HOH . E 4 HOH A 35 335 28 HOH HOH . E 4 HOH A 36 336 49 HOH HOH . E 4 HOH A 37 337 31 HOH HOH . E 4 HOH A 38 338 297 HOH HOH . E 4 HOH A 39 339 40 HOH HOH . E 4 HOH A 40 340 117 HOH HOH . E 4 HOH A 41 341 50 HOH HOH . E 4 HOH A 42 342 29 HOH HOH . E 4 HOH A 43 343 185 HOH HOH . E 4 HOH A 44 344 324 HOH HOH . E 4 HOH A 45 345 51 HOH HOH . E 4 HOH A 46 346 105 HOH HOH . E 4 HOH A 47 347 93 HOH HOH . E 4 HOH A 48 348 11 HOH HOH . E 4 HOH A 49 349 41 HOH HOH . E 4 HOH A 50 350 258 HOH HOH . E 4 HOH A 51 351 279 HOH HOH . E 4 HOH A 52 352 43 HOH HOH . E 4 HOH A 53 353 83 HOH HOH . E 4 HOH A 54 354 3 HOH HOH . E 4 HOH A 55 355 34 HOH HOH . E 4 HOH A 56 356 322 HOH HOH . E 4 HOH A 57 357 95 HOH HOH . E 4 HOH A 58 358 118 HOH HOH . E 4 HOH A 59 359 94 HOH HOH . E 4 HOH A 60 360 263 HOH HOH . E 4 HOH A 61 361 65 HOH HOH . E 4 HOH A 62 362 182 HOH HOH . E 4 HOH A 63 363 97 HOH HOH . E 4 HOH A 64 364 20 HOH HOH . E 4 HOH A 65 365 320 HOH HOH . E 4 HOH A 66 366 213 HOH HOH . E 4 HOH A 67 367 120 HOH HOH . E 4 HOH A 68 368 249 HOH HOH . E 4 HOH A 69 369 157 HOH HOH . E 4 HOH A 70 370 30 HOH HOH . E 4 HOH A 71 371 13 HOH HOH . E 4 HOH A 72 372 106 HOH HOH . E 4 HOH A 73 373 104 HOH HOH . E 4 HOH A 74 374 291 HOH HOH . E 4 HOH A 75 375 244 HOH HOH . E 4 HOH A 76 376 70 HOH HOH . E 4 HOH A 77 377 299 HOH HOH . E 4 HOH A 78 378 245 HOH HOH . E 4 HOH A 79 379 168 HOH HOH . E 4 HOH A 80 380 132 HOH HOH . E 4 HOH A 81 381 262 HOH HOH . E 4 HOH A 82 382 12 HOH HOH . E 4 HOH A 83 383 85 HOH HOH . E 4 HOH A 84 384 250 HOH HOH . E 4 HOH A 85 385 128 HOH HOH . E 4 HOH A 86 386 172 HOH HOH . E 4 HOH A 87 387 113 HOH HOH . E 4 HOH A 88 388 60 HOH HOH . E 4 HOH A 89 389 224 HOH HOH . E 4 HOH A 90 390 180 HOH HOH . E 4 HOH A 91 391 67 HOH HOH . E 4 HOH A 92 392 235 HOH HOH . E 4 HOH A 93 393 293 HOH HOH . E 4 HOH A 94 394 153 HOH HOH . E 4 HOH A 95 395 129 HOH HOH . E 4 HOH A 96 396 326 HOH HOH . E 4 HOH A 97 397 146 HOH HOH . E 4 HOH A 98 398 160 HOH HOH . E 4 HOH A 99 399 195 HOH HOH . E 4 HOH A 100 400 257 HOH HOH . E 4 HOH A 101 401 23 HOH HOH . E 4 HOH A 102 402 229 HOH HOH . E 4 HOH A 103 403 189 HOH HOH . E 4 HOH A 104 404 325 HOH HOH . E 4 HOH A 105 405 302 HOH HOH . E 4 HOH A 106 406 232 HOH HOH . E 4 HOH A 107 407 254 HOH HOH . E 4 HOH A 108 408 294 HOH HOH . E 4 HOH A 109 409 126 HOH HOH . E 4 HOH A 110 410 21 HOH HOH . E 4 HOH A 111 411 151 HOH HOH . E 4 HOH A 112 412 73 HOH HOH . E 4 HOH A 113 413 196 HOH HOH . E 4 HOH A 114 414 123 HOH HOH . E 4 HOH A 115 415 124 HOH HOH . E 4 HOH A 116 416 323 HOH HOH . E 4 HOH A 117 417 327 HOH HOH . E 4 HOH A 118 418 181 HOH HOH . E 4 HOH A 119 419 81 HOH HOH . E 4 HOH A 120 420 159 HOH HOH . E 4 HOH A 121 421 321 HOH HOH . E 4 HOH A 122 422 88 HOH HOH . E 4 HOH A 123 423 16 HOH HOH . E 4 HOH A 124 424 209 HOH HOH . E 4 HOH A 125 425 316 HOH HOH . E 4 HOH A 126 426 207 HOH HOH . E 4 HOH A 127 427 167 HOH HOH . E 4 HOH A 128 428 304 HOH HOH . E 4 HOH A 129 429 238 HOH HOH . E 4 HOH A 130 430 111 HOH HOH . E 4 HOH A 131 431 218 HOH HOH . E 4 HOH A 132 432 335 HOH HOH . E 4 HOH A 133 433 47 HOH HOH . E 4 HOH A 134 434 246 HOH HOH . E 4 HOH A 135 435 186 HOH HOH . E 4 HOH A 136 436 241 HOH HOH . E 4 HOH A 137 437 283 HOH HOH . E 4 HOH A 138 438 198 HOH HOH . E 4 HOH A 139 439 273 HOH HOH . E 4 HOH A 140 440 330 HOH HOH . E 4 HOH A 141 441 141 HOH HOH . E 4 HOH A 142 442 282 HOH HOH . E 4 HOH A 143 443 208 HOH HOH . E 4 HOH A 144 444 310 HOH HOH . E 4 HOH A 145 445 199 HOH HOH . E 4 HOH A 146 446 240 HOH HOH . E 4 HOH A 147 447 313 HOH HOH . E 4 HOH A 148 448 188 HOH HOH . E 4 HOH A 149 449 333 HOH HOH . E 4 HOH A 150 450 170 HOH HOH . E 4 HOH A 151 451 203 HOH HOH . E 4 HOH A 152 452 243 HOH HOH . E 4 HOH A 153 453 275 HOH HOH . E 4 HOH A 154 454 317 HOH HOH . E 4 HOH A 155 455 45 HOH HOH . E 4 HOH A 156 456 334 HOH HOH . E 4 HOH A 157 457 92 HOH HOH . E 4 HOH A 158 458 219 HOH HOH . E 4 HOH A 159 459 131 HOH HOH . E 4 HOH A 160 460 339 HOH HOH . E 4 HOH A 161 461 251 HOH HOH . E 4 HOH A 162 462 214 HOH HOH . E 4 HOH A 163 463 336 HOH HOH . E 4 HOH A 164 464 290 HOH HOH . E 4 HOH A 165 465 266 HOH HOH . E 4 HOH A 166 466 174 HOH HOH . E 4 HOH A 167 467 332 HOH HOH . F 4 HOH B 1 301 134 HOH HOH . F 4 HOH B 2 302 272 HOH HOH . F 4 HOH B 3 303 230 HOH HOH . F 4 HOH B 4 304 90 HOH HOH . F 4 HOH B 5 305 231 HOH HOH . F 4 HOH B 6 306 286 HOH HOH . F 4 HOH B 7 307 98 HOH HOH . F 4 HOH B 8 308 277 HOH HOH . F 4 HOH B 9 309 288 HOH HOH . F 4 HOH B 10 310 4 HOH HOH . F 4 HOH B 11 311 8 HOH HOH . F 4 HOH B 12 312 169 HOH HOH . F 4 HOH B 13 313 130 HOH HOH . F 4 HOH B 14 314 145 HOH HOH . F 4 HOH B 15 315 69 HOH HOH . F 4 HOH B 16 316 79 HOH HOH . F 4 HOH B 17 317 59 HOH HOH . F 4 HOH B 18 318 39 HOH HOH . F 4 HOH B 19 319 42 HOH HOH . F 4 HOH B 20 320 190 HOH HOH . F 4 HOH B 21 321 125 HOH HOH . F 4 HOH B 22 322 200 HOH HOH . F 4 HOH B 23 323 152 HOH HOH . F 4 HOH B 24 324 119 HOH HOH . F 4 HOH B 25 325 80 HOH HOH . F 4 HOH B 26 326 68 HOH HOH . F 4 HOH B 27 327 1 HOH HOH . F 4 HOH B 28 328 19 HOH HOH . F 4 HOH B 29 329 37 HOH HOH . F 4 HOH B 30 330 177 HOH HOH . F 4 HOH B 31 331 142 HOH HOH . F 4 HOH B 32 332 102 HOH HOH . F 4 HOH B 33 333 77 HOH HOH . F 4 HOH B 34 334 166 HOH HOH . F 4 HOH B 35 335 252 HOH HOH . F 4 HOH B 36 336 9 HOH HOH . F 4 HOH B 37 337 284 HOH HOH . F 4 HOH B 38 338 36 HOH HOH . F 4 HOH B 39 339 187 HOH HOH . F 4 HOH B 40 340 223 HOH HOH . F 4 HOH B 41 341 17 HOH HOH . F 4 HOH B 42 342 139 HOH HOH . F 4 HOH B 43 343 38 HOH HOH . F 4 HOH B 44 344 101 HOH HOH . F 4 HOH B 45 345 84 HOH HOH . F 4 HOH B 46 346 71 HOH HOH . F 4 HOH B 47 347 56 HOH HOH . F 4 HOH B 48 348 295 HOH HOH . F 4 HOH B 49 349 140 HOH HOH . F 4 HOH B 50 350 14 HOH HOH . F 4 HOH B 51 351 26 HOH HOH . F 4 HOH B 52 352 171 HOH HOH . F 4 HOH B 53 353 155 HOH HOH . F 4 HOH B 54 354 54 HOH HOH . F 4 HOH B 55 355 162 HOH HOH . F 4 HOH B 56 356 33 HOH HOH . F 4 HOH B 57 357 76 HOH HOH . F 4 HOH B 58 358 197 HOH HOH . F 4 HOH B 59 359 147 HOH HOH . F 4 HOH B 60 360 156 HOH HOH . F 4 HOH B 61 361 72 HOH HOH . F 4 HOH B 62 362 96 HOH HOH . F 4 HOH B 63 363 136 HOH HOH . F 4 HOH B 64 364 103 HOH HOH . F 4 HOH B 65 365 35 HOH HOH . F 4 HOH B 66 366 267 HOH HOH . F 4 HOH B 67 367 114 HOH HOH . F 4 HOH B 68 368 331 HOH HOH . F 4 HOH B 69 369 2 HOH HOH . F 4 HOH B 70 370 27 HOH HOH . F 4 HOH B 71 371 6 HOH HOH . F 4 HOH B 72 372 253 HOH HOH . F 4 HOH B 73 373 91 HOH HOH . F 4 HOH B 74 374 75 HOH HOH . F 4 HOH B 75 375 247 HOH HOH . F 4 HOH B 76 376 150 HOH HOH . F 4 HOH B 77 377 109 HOH HOH . F 4 HOH B 78 378 149 HOH HOH . F 4 HOH B 79 379 108 HOH HOH . F 4 HOH B 80 380 55 HOH HOH . F 4 HOH B 81 381 202 HOH HOH . F 4 HOH B 82 382 239 HOH HOH . F 4 HOH B 83 383 22 HOH HOH . F 4 HOH B 84 384 148 HOH HOH . F 4 HOH B 85 385 296 HOH HOH . F 4 HOH B 86 386 137 HOH HOH . F 4 HOH B 87 387 24 HOH HOH . F 4 HOH B 88 388 298 HOH HOH . F 4 HOH B 89 389 61 HOH HOH . F 4 HOH B 90 390 46 HOH HOH . F 4 HOH B 91 391 179 HOH HOH . F 4 HOH B 92 392 222 HOH HOH . F 4 HOH B 93 393 62 HOH HOH . F 4 HOH B 94 394 99 HOH HOH . F 4 HOH B 95 395 173 HOH HOH . F 4 HOH B 96 396 314 HOH HOH . F 4 HOH B 97 397 48 HOH HOH . F 4 HOH B 98 398 205 HOH HOH . F 4 HOH B 99 399 301 HOH HOH . F 4 HOH B 100 400 201 HOH HOH . F 4 HOH B 101 401 110 HOH HOH . F 4 HOH B 102 402 66 HOH HOH . F 4 HOH B 103 403 64 HOH HOH . F 4 HOH B 104 404 269 HOH HOH . F 4 HOH B 105 405 194 HOH HOH . F 4 HOH B 106 406 165 HOH HOH . F 4 HOH B 107 407 276 HOH HOH . F 4 HOH B 108 408 107 HOH HOH . F 4 HOH B 109 409 328 HOH HOH . F 4 HOH B 110 410 300 HOH HOH . F 4 HOH B 111 411 311 HOH HOH . F 4 HOH B 112 412 44 HOH HOH . F 4 HOH B 113 413 212 HOH HOH . F 4 HOH B 114 414 133 HOH HOH . F 4 HOH B 115 415 278 HOH HOH . F 4 HOH B 116 416 280 HOH HOH . F 4 HOH B 117 417 163 HOH HOH . F 4 HOH B 118 418 178 HOH HOH . F 4 HOH B 119 419 78 HOH HOH . F 4 HOH B 120 420 206 HOH HOH . F 4 HOH B 121 421 183 HOH HOH . F 4 HOH B 122 422 329 HOH HOH . F 4 HOH B 123 423 303 HOH HOH . F 4 HOH B 124 424 161 HOH HOH . F 4 HOH B 125 425 233 HOH HOH . F 4 HOH B 126 426 287 HOH HOH . F 4 HOH B 127 427 220 HOH HOH . F 4 HOH B 128 428 87 HOH HOH . F 4 HOH B 129 429 319 HOH HOH . F 4 HOH B 130 430 144 HOH HOH . F 4 HOH B 131 431 86 HOH HOH . F 4 HOH B 132 432 121 HOH HOH . F 4 HOH B 133 433 265 HOH HOH . F 4 HOH B 134 434 274 HOH HOH . F 4 HOH B 135 435 338 HOH HOH . F 4 HOH B 136 436 315 HOH HOH . F 4 HOH B 137 437 289 HOH HOH . F 4 HOH B 138 438 143 HOH HOH . F 4 HOH B 139 439 237 HOH HOH . F 4 HOH B 140 440 236 HOH HOH . F 4 HOH B 141 441 138 HOH HOH . F 4 HOH B 142 442 227 HOH HOH . F 4 HOH B 143 443 234 HOH HOH . F 4 HOH B 144 444 217 HOH HOH . F 4 HOH B 145 445 256 HOH HOH . F 4 HOH B 146 446 63 HOH HOH . F 4 HOH B 147 447 306 HOH HOH . F 4 HOH B 148 448 221 HOH HOH . F 4 HOH B 149 449 337 HOH HOH . F 4 HOH B 150 450 184 HOH HOH . F 4 HOH B 151 451 308 HOH HOH . F 4 HOH B 152 452 312 HOH HOH . F 4 HOH B 153 453 122 HOH HOH . F 4 HOH B 154 454 264 HOH HOH . F 4 HOH B 155 455 211 HOH HOH . F 4 HOH B 156 456 309 HOH HOH . F 4 HOH B 157 457 192 HOH HOH . F 4 HOH B 158 458 260 HOH HOH . F 4 HOH B 159 459 255 HOH HOH . F 4 HOH B 160 460 261 HOH HOH . F 4 HOH B 161 461 305 HOH HOH . F 4 HOH B 162 462 259 HOH HOH . F 4 HOH B 163 463 191 HOH HOH . F 4 HOH B 164 464 158 HOH HOH . F 4 HOH B 165 465 271 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 -21.087 -1.131 -48.452 1 47.14 ? S DMS 201 B 1 HETATM 2 O O DMS . . . D 3 -20.428 -1.42 -49.805 1 50.42 ? O DMS 201 B 1 HETATM 3 C C1 DMS . . . D 3 -22.048 -2.556 -48.084 1 43.67 ? C1 DMS 201 B 1 HETATM 4 C C2 DMS . . . D 3 -22.44 -0.023 -48.8 1 46.03 ? C2 DMS 201 B 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #