data_7GNZ # _model_server_result.job_id 1qUtrMZ6XzuoVa9Jpgg6iQ _model_server_result.datetime_utc '2024-11-25 01:17:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gnz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7GNZ # _exptl.entry_id 7GNZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.178 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(4-methylpyridin-3-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GNZ _cell.length_a 42.737 _cell.length_b 62.308 _cell.length_c 147.251 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GNZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H10 N2 O' _chem_comp.formula_weight 150.178 _chem_comp.id SZY _chem_comp.mon_nstd_flag . _chem_comp.name N-(4-methylpyridin-3-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 C01 SZY sing 299 n n O03 C02 SZY doub 300 n n N04 C02 SZY sing 301 n n C05 N04 SZY sing 302 n n C06 C05 SZY doub 303 n y N07 C06 SZY sing 304 n y C08 N07 SZY doub 305 n y C09 C08 SZY sing 306 n y C10 C09 SZY doub 307 n y C11 C10 SZY sing 308 n n C05 C10 SZY sing 309 n y C01 H012 SZY sing 310 n n C01 H011 SZY sing 311 n n C01 H013 SZY sing 312 n n C06 H061 SZY sing 313 n n C08 H081 SZY sing 314 n n C09 H091 SZY sing 315 n n C11 H111 SZY sing 316 n n C11 H113 SZY sing 317 n n C11 H112 SZY sing 318 n n N04 H041 SZY sing 319 n n # _atom_sites.entry_id 7GNZ _atom_sites.fract_transf_matrix[1][1] 0.023399 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016049 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 201 202 DMS DMS . D 3 SZY B 1 201 201 SZY LIG . E 4 HOH A 1 301 281 HOH HOH . E 4 HOH A 2 302 82 HOH HOH . E 4 HOH A 3 303 324 HOH HOH . E 4 HOH A 4 304 74 HOH HOH . E 4 HOH A 5 305 294 HOH HOH . E 4 HOH A 6 306 15 HOH HOH . E 4 HOH A 7 307 225 HOH HOH . E 4 HOH A 8 308 204 HOH HOH . E 4 HOH A 9 309 49 HOH HOH . E 4 HOH A 10 310 135 HOH HOH . E 4 HOH A 11 311 117 HOH HOH . E 4 HOH A 12 312 299 HOH HOH . E 4 HOH A 13 313 32 HOH HOH . E 4 HOH A 14 314 40 HOH HOH . E 4 HOH A 15 315 242 HOH HOH . E 4 HOH A 16 316 279 HOH HOH . E 4 HOH A 17 317 100 HOH HOH . E 4 HOH A 18 318 127 HOH HOH . E 4 HOH A 19 319 248 HOH HOH . E 4 HOH A 20 320 53 HOH HOH . E 4 HOH A 21 321 115 HOH HOH . E 4 HOH A 22 322 116 HOH HOH . E 4 HOH A 23 323 29 HOH HOH . E 4 HOH A 24 324 7 HOH HOH . E 4 HOH A 25 325 210 HOH HOH . E 4 HOH A 26 326 245 HOH HOH . E 4 HOH A 27 327 215 HOH HOH . E 4 HOH A 28 328 41 HOH HOH . E 4 HOH A 29 329 51 HOH HOH . E 4 HOH A 30 330 57 HOH HOH . E 4 HOH A 31 331 112 HOH HOH . E 4 HOH A 32 332 216 HOH HOH . E 4 HOH A 33 333 18 HOH HOH . E 4 HOH A 34 334 31 HOH HOH . E 4 HOH A 35 335 258 HOH HOH . E 4 HOH A 36 336 10 HOH HOH . E 4 HOH A 37 337 292 HOH HOH . E 4 HOH A 38 338 164 HOH HOH . E 4 HOH A 39 339 89 HOH HOH . E 4 HOH A 40 340 297 HOH HOH . E 4 HOH A 41 341 52 HOH HOH . E 4 HOH A 42 342 3 HOH HOH . E 4 HOH A 43 343 97 HOH HOH . E 4 HOH A 44 344 105 HOH HOH . E 4 HOH A 45 345 50 HOH HOH . E 4 HOH A 46 346 98 HOH HOH . E 4 HOH A 47 347 94 HOH HOH . E 4 HOH A 48 348 58 HOH HOH . E 4 HOH A 49 349 25 HOH HOH . E 4 HOH A 50 350 28 HOH HOH . E 4 HOH A 51 351 30 HOH HOH . E 4 HOH A 52 352 322 HOH HOH . E 4 HOH A 53 353 65 HOH HOH . E 4 HOH A 54 354 11 HOH HOH . E 4 HOH A 55 355 13 HOH HOH . E 4 HOH A 56 356 118 HOH HOH . E 4 HOH A 57 357 20 HOH HOH . E 4 HOH A 58 358 154 HOH HOH . E 4 HOH A 59 359 182 HOH HOH . E 4 HOH A 60 360 43 HOH HOH . E 4 HOH A 61 361 93 HOH HOH . E 4 HOH A 62 362 83 HOH HOH . E 4 HOH A 63 363 213 HOH HOH . E 4 HOH A 64 364 129 HOH HOH . E 4 HOH A 65 365 185 HOH HOH . E 4 HOH A 66 366 244 HOH HOH . E 4 HOH A 67 367 85 HOH HOH . E 4 HOH A 68 368 172 HOH HOH . E 4 HOH A 69 369 193 HOH HOH . E 4 HOH A 70 370 151 HOH HOH . E 4 HOH A 71 371 73 HOH HOH . E 4 HOH A 72 372 70 HOH HOH . E 4 HOH A 73 373 106 HOH HOH . E 4 HOH A 74 374 104 HOH HOH . E 4 HOH A 75 375 189 HOH HOH . E 4 HOH A 76 376 95 HOH HOH . E 4 HOH A 77 377 60 HOH HOH . E 4 HOH A 78 378 113 HOH HOH . E 4 HOH A 79 379 250 HOH HOH . E 4 HOH A 80 380 263 HOH HOH . E 4 HOH A 81 381 181 HOH HOH . E 4 HOH A 82 382 195 HOH HOH . E 4 HOH A 83 383 235 HOH HOH . E 4 HOH A 84 384 180 HOH HOH . E 4 HOH A 85 385 153 HOH HOH . E 4 HOH A 86 386 146 HOH HOH . E 4 HOH A 87 387 12 HOH HOH . E 4 HOH A 88 388 132 HOH HOH . E 4 HOH A 89 389 120 HOH HOH . E 4 HOH A 90 390 196 HOH HOH . E 4 HOH A 91 391 128 HOH HOH . E 4 HOH A 92 392 229 HOH HOH . E 4 HOH A 93 393 67 HOH HOH . E 4 HOH A 94 394 160 HOH HOH . E 4 HOH A 95 395 285 HOH HOH . E 4 HOH A 96 396 124 HOH HOH . E 4 HOH A 97 397 321 HOH HOH . E 4 HOH A 98 398 23 HOH HOH . E 4 HOH A 99 399 238 HOH HOH . E 4 HOH A 100 400 168 HOH HOH . E 4 HOH A 101 401 21 HOH HOH . E 4 HOH A 102 402 159 HOH HOH . E 4 HOH A 103 403 218 HOH HOH . E 4 HOH A 104 404 304 HOH HOH . E 4 HOH A 105 405 16 HOH HOH . E 4 HOH A 106 406 302 HOH HOH . E 4 HOH A 107 407 126 HOH HOH . E 4 HOH A 108 408 169 HOH HOH . E 4 HOH A 109 409 209 HOH HOH . E 4 HOH A 110 410 186 HOH HOH . E 4 HOH A 111 411 291 HOH HOH . E 4 HOH A 112 412 47 HOH HOH . E 4 HOH A 113 413 81 HOH HOH . E 4 HOH A 114 414 123 HOH HOH . E 4 HOH A 115 415 257 HOH HOH . E 4 HOH A 116 416 111 HOH HOH . E 4 HOH A 117 417 254 HOH HOH . E 4 HOH A 118 418 232 HOH HOH . E 4 HOH A 119 419 283 HOH HOH . E 4 HOH A 120 420 226 HOH HOH . E 4 HOH A 121 421 246 HOH HOH . E 4 HOH A 122 422 219 HOH HOH . E 4 HOH A 123 423 318 HOH HOH . E 4 HOH A 124 424 88 HOH HOH . E 4 HOH A 125 425 198 HOH HOH . E 4 HOH A 126 426 313 HOH HOH . E 4 HOH A 127 427 141 HOH HOH . E 4 HOH A 128 428 282 HOH HOH . E 4 HOH A 129 429 207 HOH HOH . E 4 HOH A 130 430 273 HOH HOH . E 4 HOH A 131 431 167 HOH HOH . E 4 HOH A 132 432 188 HOH HOH . E 4 HOH A 133 433 241 HOH HOH . E 4 HOH A 134 434 203 HOH HOH . E 4 HOH A 135 435 208 HOH HOH . E 4 HOH A 136 436 310 HOH HOH . E 4 HOH A 137 437 320 HOH HOH . E 4 HOH A 138 438 240 HOH HOH . E 4 HOH A 139 439 199 HOH HOH . E 4 HOH A 140 440 45 HOH HOH . E 4 HOH A 141 441 249 HOH HOH . E 4 HOH A 142 442 92 HOH HOH . E 4 HOH A 143 443 243 HOH HOH . E 4 HOH A 144 444 319 HOH HOH . E 4 HOH A 145 445 170 HOH HOH . E 4 HOH A 146 446 275 HOH HOH . E 4 HOH A 147 447 251 HOH HOH . E 4 HOH A 148 448 131 HOH HOH . E 4 HOH A 149 449 214 HOH HOH . E 4 HOH A 150 450 290 HOH HOH . E 4 HOH A 151 451 266 HOH HOH . E 4 HOH A 152 452 174 HOH HOH . F 4 HOH B 1 301 277 HOH HOH . F 4 HOH B 2 302 288 HOH HOH . F 4 HOH B 3 303 286 HOH HOH . F 4 HOH B 4 304 5 HOH HOH . F 4 HOH B 5 305 200 HOH HOH . F 4 HOH B 6 306 76 HOH HOH . F 4 HOH B 7 307 4 HOH HOH . F 4 HOH B 8 308 130 HOH HOH . F 4 HOH B 9 309 145 HOH HOH . F 4 HOH B 10 310 162 HOH HOH . F 4 HOH B 11 311 230 HOH HOH . F 4 HOH B 12 312 125 HOH HOH . F 4 HOH B 13 313 142 HOH HOH . F 4 HOH B 14 314 79 HOH HOH . F 4 HOH B 15 315 103 HOH HOH . F 4 HOH B 16 316 59 HOH HOH . F 4 HOH B 17 317 295 HOH HOH . F 4 HOH B 18 318 152 HOH HOH . F 4 HOH B 19 319 171 HOH HOH . F 4 HOH B 20 320 17 HOH HOH . F 4 HOH B 21 321 19 HOH HOH . F 4 HOH B 22 322 68 HOH HOH . F 4 HOH B 23 323 298 HOH HOH . F 4 HOH B 24 324 42 HOH HOH . F 4 HOH B 25 325 119 HOH HOH . F 4 HOH B 26 326 1 HOH HOH . F 4 HOH B 27 327 69 HOH HOH . F 4 HOH B 28 328 9 HOH HOH . F 4 HOH B 29 329 177 HOH HOH . F 4 HOH B 30 330 101 HOH HOH . F 4 HOH B 31 331 37 HOH HOH . F 4 HOH B 32 332 166 HOH HOH . F 4 HOH B 33 333 247 HOH HOH . F 4 HOH B 34 334 84 HOH HOH . F 4 HOH B 35 335 14 HOH HOH . F 4 HOH B 36 336 36 HOH HOH . F 4 HOH B 37 337 2 HOH HOH . F 4 HOH B 38 338 6 HOH HOH . F 4 HOH B 39 339 26 HOH HOH . F 4 HOH B 40 340 8 HOH HOH . F 4 HOH B 41 341 77 HOH HOH . F 4 HOH B 42 342 284 HOH HOH . F 4 HOH B 43 343 80 HOH HOH . F 4 HOH B 44 344 27 HOH HOH . F 4 HOH B 45 345 252 HOH HOH . F 4 HOH B 46 346 39 HOH HOH . F 4 HOH B 47 347 175 HOH HOH . F 4 HOH B 48 348 139 HOH HOH . F 4 HOH B 49 349 54 HOH HOH . F 4 HOH B 50 350 75 HOH HOH . F 4 HOH B 51 351 179 HOH HOH . F 4 HOH B 52 352 35 HOH HOH . F 4 HOH B 53 353 24 HOH HOH . F 4 HOH B 54 354 55 HOH HOH . F 4 HOH B 55 355 38 HOH HOH . F 4 HOH B 56 356 150 HOH HOH . F 4 HOH B 57 357 33 HOH HOH . F 4 HOH B 58 358 136 HOH HOH . F 4 HOH B 59 359 190 HOH HOH . F 4 HOH B 60 360 99 HOH HOH . F 4 HOH B 61 361 155 HOH HOH . F 4 HOH B 62 362 62 HOH HOH . F 4 HOH B 63 363 102 HOH HOH . F 4 HOH B 64 364 137 HOH HOH . F 4 HOH B 65 365 222 HOH HOH . F 4 HOH B 66 366 46 HOH HOH . F 4 HOH B 67 367 147 HOH HOH . F 4 HOH B 68 368 156 HOH HOH . F 4 HOH B 69 369 276 HOH HOH . F 4 HOH B 70 370 96 HOH HOH . F 4 HOH B 71 371 239 HOH HOH . F 4 HOH B 72 372 56 HOH HOH . F 4 HOH B 73 373 301 HOH HOH . F 4 HOH B 74 374 296 HOH HOH . F 4 HOH B 75 375 91 HOH HOH . F 4 HOH B 76 376 61 HOH HOH . F 4 HOH B 77 377 149 HOH HOH . F 4 HOH B 78 378 173 HOH HOH . F 4 HOH B 79 379 107 HOH HOH . F 4 HOH B 80 380 140 HOH HOH . F 4 HOH B 81 381 224 HOH HOH . F 4 HOH B 82 382 223 HOH HOH . F 4 HOH B 83 383 71 HOH HOH . F 4 HOH B 84 384 109 HOH HOH . F 4 HOH B 85 385 202 HOH HOH . F 4 HOH B 86 386 187 HOH HOH . F 4 HOH B 87 387 300 HOH HOH . F 4 HOH B 88 388 314 HOH HOH . F 4 HOH B 89 389 205 HOH HOH . F 4 HOH B 90 390 201 HOH HOH . F 4 HOH B 91 391 253 HOH HOH . F 4 HOH B 92 392 267 HOH HOH . F 4 HOH B 93 393 22 HOH HOH . F 4 HOH B 94 394 108 HOH HOH . F 4 HOH B 95 395 72 HOH HOH . F 4 HOH B 96 396 165 HOH HOH . F 4 HOH B 97 397 48 HOH HOH . F 4 HOH B 98 398 66 HOH HOH . F 4 HOH B 99 399 64 HOH HOH . F 4 HOH B 100 400 178 HOH HOH . F 4 HOH B 101 401 78 HOH HOH . F 4 HOH B 102 402 138 HOH HOH . F 4 HOH B 103 403 144 HOH HOH . F 4 HOH B 104 404 44 HOH HOH . F 4 HOH B 105 405 212 HOH HOH . F 4 HOH B 106 406 110 HOH HOH . F 4 HOH B 107 407 280 HOH HOH . F 4 HOH B 108 408 265 HOH HOH . F 4 HOH B 109 409 278 HOH HOH . F 4 HOH B 110 410 323 HOH HOH . F 4 HOH B 111 411 206 HOH HOH . F 4 HOH B 112 412 233 HOH HOH . F 4 HOH B 113 413 87 HOH HOH . F 4 HOH B 114 414 133 HOH HOH . F 4 HOH B 115 415 287 HOH HOH . F 4 HOH B 116 416 317 HOH HOH . F 4 HOH B 117 417 121 HOH HOH . F 4 HOH B 118 418 197 HOH HOH . F 4 HOH B 119 419 163 HOH HOH . F 4 HOH B 120 420 220 HOH HOH . F 4 HOH B 121 421 183 HOH HOH . F 4 HOH B 122 422 86 HOH HOH . F 4 HOH B 123 423 161 HOH HOH . F 4 HOH B 124 424 303 HOH HOH . F 4 HOH B 125 425 274 HOH HOH . F 4 HOH B 126 426 268 HOH HOH . F 4 HOH B 127 427 289 HOH HOH . F 4 HOH B 128 428 311 HOH HOH . F 4 HOH B 129 429 143 HOH HOH . F 4 HOH B 130 430 236 HOH HOH . F 4 HOH B 131 431 308 HOH HOH . F 4 HOH B 132 432 217 HOH HOH . F 4 HOH B 133 433 316 HOH HOH . F 4 HOH B 134 434 306 HOH HOH . F 4 HOH B 135 435 221 HOH HOH . F 4 HOH B 136 436 315 HOH HOH . F 4 HOH B 137 437 63 HOH HOH . F 4 HOH B 138 438 184 HOH HOH . F 4 HOH B 139 439 122 HOH HOH . F 4 HOH B 140 440 227 HOH HOH . F 4 HOH B 141 441 264 HOH HOH . F 4 HOH B 142 442 309 HOH HOH . F 4 HOH B 143 443 269 HOH HOH . F 4 HOH B 144 444 312 HOH HOH . F 4 HOH B 145 445 261 HOH HOH . F 4 HOH B 146 446 255 HOH HOH . F 4 HOH B 147 447 211 HOH HOH . F 4 HOH B 148 448 158 HOH HOH . F 4 HOH B 149 449 191 HOH HOH . F 4 HOH B 150 450 271 HOH HOH . F 4 HOH B 151 451 305 HOH HOH . F 4 HOH B 152 452 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 SZY . . . D 3 -11.788 -2.469 -17.684 0.54 44.05 ? C10 SZY 201 B 1 HETATM 2 C C01 SZY . . . D 3 -12.353 -6.375 -19.595 0.54 43.88 ? C01 SZY 201 B 1 HETATM 3 C C02 SZY . . . D 3 -13.248 -5.178 -19.691 0.54 45.19 ? C02 SZY 201 B 1 HETATM 4 C C05 SZY . . . D 3 -11.958 -3.843 -17.95 0.54 44 ? C05 SZY 201 B 1 HETATM 5 C C06 SZY . . . D 3 -11.077 -4.736 -17.332 0.54 42.36 ? C06 SZY 201 B 1 HETATM 6 C C08 SZY . . . D 3 -9.988 -3.075 -16.218 0.54 42.05 ? C08 SZY 201 B 1 HETATM 7 C C09 SZY . . . D 3 -10.782 -2.104 -16.792 0.54 43.96 ? C09 SZY 201 B 1 HETATM 8 C C11 SZY . . . D 3 -12.66 -1.417 -18.323 0.54 44.62 ? C11 SZY 201 B 1 HETATM 9 N N04 SZY . . . D 3 -13.093 -4.252 -18.706 0.54 44.46 ? N04 SZY 201 B 1 HETATM 10 N N07 SZY . . . D 3 -10.11 -4.375 -16.482 0.54 42.07 ? N07 SZY 201 B 1 HETATM 11 O O03 SZY . . . D 3 -14.101 -5.077 -20.574 0.54 44.93 ? O03 SZY 201 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 490 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #