data_7GP8 # _model_server_result.job_id j4Gju52C_XR7uS2538eslw _model_server_result.datetime_utc '2024-11-21 22:30:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gp8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7GP8 # _exptl.entry_id 7GP8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GP8 _cell.length_a 42.838 _cell.length_b 62.605 _cell.length_c 147.578 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E 1 1 B,C,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GP8 _atom_sites.fract_transf_matrix[1][1] 0.023344 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015973 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006776 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VVG B 1 201 201 VVG LIG . D 3 DMS B 1 202 202 DMS DMS . E 4 HOH A 1 201 281 HOH HOH . E 4 HOH A 2 202 82 HOH HOH . E 4 HOH A 3 203 5 HOH HOH . E 4 HOH A 4 204 49 HOH HOH . E 4 HOH A 5 205 115 HOH HOH . E 4 HOH A 6 206 32 HOH HOH . E 4 HOH A 7 207 58 HOH HOH . E 4 HOH A 8 208 154 HOH HOH . E 4 HOH A 9 209 7 HOH HOH . E 4 HOH A 10 210 225 HOH HOH . E 4 HOH A 11 211 51 HOH HOH . E 4 HOH A 12 212 279 HOH HOH . E 4 HOH A 13 213 57 HOH HOH . E 4 HOH A 14 214 210 HOH HOH . E 4 HOH A 15 215 52 HOH HOH . E 4 HOH A 16 216 215 HOH HOH . E 4 HOH A 17 217 53 HOH HOH . E 4 HOH A 18 218 40 HOH HOH . E 4 HOH A 19 219 100 HOH HOH . E 4 HOH A 20 220 116 HOH HOH . E 4 HOH A 21 221 15 HOH HOH . E 4 HOH A 22 222 83 HOH HOH . E 4 HOH A 23 223 105 HOH HOH . E 4 HOH A 24 224 29 HOH HOH . E 4 HOH A 25 225 117 HOH HOH . E 4 HOH A 26 226 25 HOH HOH . E 4 HOH A 27 227 338 HOH HOH . E 4 HOH A 28 228 31 HOH HOH . E 4 HOH A 29 229 330 HOH HOH . E 4 HOH A 30 230 18 HOH HOH . E 4 HOH A 31 231 127 HOH HOH . E 4 HOH A 32 232 185 HOH HOH . E 4 HOH A 33 233 216 HOH HOH . E 4 HOH A 34 234 135 HOH HOH . E 4 HOH A 35 235 118 HOH HOH . E 4 HOH A 36 236 112 HOH HOH . E 4 HOH A 37 237 193 HOH HOH . E 4 HOH A 38 238 95 HOH HOH . E 4 HOH A 39 239 28 HOH HOH . E 4 HOH A 40 240 50 HOH HOH . E 4 HOH A 41 241 292 HOH HOH . E 4 HOH A 42 242 258 HOH HOH . E 4 HOH A 43 243 94 HOH HOH . E 4 HOH A 44 244 13 HOH HOH . E 4 HOH A 45 245 41 HOH HOH . E 4 HOH A 46 246 242 HOH HOH . E 4 HOH A 47 247 248 HOH HOH . E 4 HOH A 48 248 74 HOH HOH . E 4 HOH A 49 249 93 HOH HOH . E 4 HOH A 50 250 204 HOH HOH . E 4 HOH A 51 251 11 HOH HOH . E 4 HOH A 52 252 89 HOH HOH . E 4 HOH A 53 253 20 HOH HOH . E 4 HOH A 54 254 3 HOH HOH . E 4 HOH A 55 255 297 HOH HOH . E 4 HOH A 56 256 10 HOH HOH . E 4 HOH A 57 257 213 HOH HOH . E 4 HOH A 58 258 65 HOH HOH . E 4 HOH A 59 259 318 HOH HOH . E 4 HOH A 60 260 43 HOH HOH . E 4 HOH A 61 261 299 HOH HOH . E 4 HOH A 62 262 104 HOH HOH . E 4 HOH A 63 263 30 HOH HOH . E 4 HOH A 64 264 291 HOH HOH . E 4 HOH A 65 265 97 HOH HOH . E 4 HOH A 66 266 70 HOH HOH . E 4 HOH A 67 267 244 HOH HOH . E 4 HOH A 68 268 157 HOH HOH . E 4 HOH A 69 269 182 HOH HOH . E 4 HOH A 70 270 120 HOH HOH . E 4 HOH A 71 271 245 HOH HOH . E 4 HOH A 72 272 113 HOH HOH . E 4 HOH A 73 273 12 HOH HOH . E 4 HOH A 74 274 85 HOH HOH . E 4 HOH A 75 275 172 HOH HOH . E 4 HOH A 76 276 129 HOH HOH . E 4 HOH A 77 277 334 HOH HOH . E 4 HOH A 78 278 60 HOH HOH . E 4 HOH A 79 279 128 HOH HOH . E 4 HOH A 80 280 329 HOH HOH . E 4 HOH A 81 281 235 HOH HOH . E 4 HOH A 82 282 123 HOH HOH . E 4 HOH A 83 283 23 HOH HOH . E 4 HOH A 84 284 164 HOH HOH . E 4 HOH A 85 285 146 HOH HOH . E 4 HOH A 86 286 238 HOH HOH . E 4 HOH A 87 287 153 HOH HOH . E 4 HOH A 88 288 67 HOH HOH . E 4 HOH A 89 289 180 HOH HOH . E 4 HOH A 90 290 229 HOH HOH . E 4 HOH A 91 291 302 HOH HOH . E 4 HOH A 92 292 285 HOH HOH . E 4 HOH A 93 293 168 HOH HOH . E 4 HOH A 94 294 106 HOH HOH . E 4 HOH A 95 295 250 HOH HOH . E 4 HOH A 96 296 160 HOH HOH . E 4 HOH A 97 297 209 HOH HOH . E 4 HOH A 98 298 73 HOH HOH . E 4 HOH A 99 299 224 HOH HOH . E 4 HOH A 100 300 325 HOH HOH . E 4 HOH A 101 301 322 HOH HOH . E 4 HOH A 102 302 151 HOH HOH . E 4 HOH A 103 303 181 HOH HOH . E 4 HOH A 104 304 189 HOH HOH . E 4 HOH A 105 305 124 HOH HOH . E 4 HOH A 106 306 132 HOH HOH . E 4 HOH A 107 307 81 HOH HOH . E 4 HOH A 108 308 304 HOH HOH . E 4 HOH A 109 309 126 HOH HOH . E 4 HOH A 110 310 257 HOH HOH . E 4 HOH A 111 311 219 HOH HOH . E 4 HOH A 112 312 331 HOH HOH . E 4 HOH A 113 313 326 HOH HOH . E 4 HOH A 114 314 159 HOH HOH . E 4 HOH A 115 315 232 HOH HOH . E 4 HOH A 116 316 16 HOH HOH . E 4 HOH A 117 317 21 HOH HOH . E 4 HOH A 118 318 316 HOH HOH . E 4 HOH A 119 319 88 HOH HOH . E 4 HOH A 120 320 294 HOH HOH . E 4 HOH A 121 321 327 HOH HOH . E 4 HOH A 122 322 195 HOH HOH . E 4 HOH A 123 323 111 HOH HOH . E 4 HOH A 124 324 263 HOH HOH . E 4 HOH A 125 325 196 HOH HOH . E 4 HOH A 126 326 47 HOH HOH . E 4 HOH A 127 327 293 HOH HOH . E 4 HOH A 128 328 313 HOH HOH . E 4 HOH A 129 329 226 HOH HOH . E 4 HOH A 130 330 283 HOH HOH . E 4 HOH A 131 331 273 HOH HOH . E 4 HOH A 132 332 324 HOH HOH . E 4 HOH A 133 333 241 HOH HOH . E 4 HOH A 134 334 186 HOH HOH . E 4 HOH A 135 335 208 HOH HOH . E 4 HOH A 136 336 141 HOH HOH . E 4 HOH A 137 337 246 HOH HOH . E 4 HOH A 138 338 192 HOH HOH . E 4 HOH A 139 339 282 HOH HOH . E 4 HOH A 140 340 310 HOH HOH . E 4 HOH A 141 341 198 HOH HOH . E 4 HOH A 142 342 240 HOH HOH . E 4 HOH A 143 343 199 HOH HOH . E 4 HOH A 144 344 167 HOH HOH . E 4 HOH A 145 345 237 HOH HOH . E 4 HOH A 146 346 207 HOH HOH . E 4 HOH A 147 347 170 HOH HOH . E 4 HOH A 148 348 249 HOH HOH . E 4 HOH A 149 349 275 HOH HOH . E 4 HOH A 150 350 188 HOH HOH . E 4 HOH A 151 351 92 HOH HOH . E 4 HOH A 152 352 203 HOH HOH . E 4 HOH A 153 353 45 HOH HOH . E 4 HOH A 154 354 251 HOH HOH . E 4 HOH A 155 355 243 HOH HOH . E 4 HOH A 156 356 131 HOH HOH . E 4 HOH A 157 357 214 HOH HOH . E 4 HOH A 158 358 340 HOH HOH . E 4 HOH A 159 359 290 HOH HOH . E 4 HOH A 160 360 174 HOH HOH . E 4 HOH A 161 361 336 HOH HOH . E 4 HOH A 162 362 266 HOH HOH . E 4 HOH A 163 363 335 HOH HOH . F 4 HOH B 1 301 286 HOH HOH . F 4 HOH B 2 302 4 HOH HOH . F 4 HOH B 3 303 200 HOH HOH . F 4 HOH B 4 304 134 HOH HOH . F 4 HOH B 5 305 288 HOH HOH . F 4 HOH B 6 306 169 HOH HOH . F 4 HOH B 7 307 98 HOH HOH . F 4 HOH B 8 308 90 HOH HOH . F 4 HOH B 9 309 139 HOH HOH . F 4 HOH B 10 310 345 HOH HOH . F 4 HOH B 11 311 328 HOH HOH . F 4 HOH B 12 312 145 HOH HOH . F 4 HOH B 13 313 8 HOH HOH . F 4 HOH B 14 314 231 HOH HOH . F 4 HOH B 15 315 69 HOH HOH . F 4 HOH B 16 316 125 HOH HOH . F 4 HOH B 17 317 42 HOH HOH . F 4 HOH B 18 318 130 HOH HOH . F 4 HOH B 19 319 1 HOH HOH . F 4 HOH B 20 320 344 HOH HOH . F 4 HOH B 21 321 295 HOH HOH . F 4 HOH B 22 322 9 HOH HOH . F 4 HOH B 23 323 272 HOH HOH . F 4 HOH B 24 324 38 HOH HOH . F 4 HOH B 25 325 119 HOH HOH . F 4 HOH B 26 326 68 HOH HOH . F 4 HOH B 27 327 79 HOH HOH . F 4 HOH B 28 328 162 HOH HOH . F 4 HOH B 29 329 177 HOH HOH . F 4 HOH B 30 330 76 HOH HOH . F 4 HOH B 31 331 39 HOH HOH . F 4 HOH B 32 332 252 HOH HOH . F 4 HOH B 33 333 37 HOH HOH . F 4 HOH B 34 334 166 HOH HOH . F 4 HOH B 35 335 33 HOH HOH . F 4 HOH B 36 336 59 HOH HOH . F 4 HOH B 37 337 267 HOH HOH . F 4 HOH B 38 338 36 HOH HOH . F 4 HOH B 39 339 102 HOH HOH . F 4 HOH B 40 340 14 HOH HOH . F 4 HOH B 41 341 77 HOH HOH . F 4 HOH B 42 342 230 HOH HOH . F 4 HOH B 43 343 142 HOH HOH . F 4 HOH B 44 344 101 HOH HOH . F 4 HOH B 45 345 80 HOH HOH . F 4 HOH B 46 346 148 HOH HOH . F 4 HOH B 47 347 35 HOH HOH . F 4 HOH B 48 348 27 HOH HOH . F 4 HOH B 49 349 19 HOH HOH . F 4 HOH B 50 350 277 HOH HOH . F 4 HOH B 51 351 136 HOH HOH . F 4 HOH B 52 352 17 HOH HOH . F 4 HOH B 53 353 278 HOH HOH . F 4 HOH B 54 354 269 HOH HOH . F 4 HOH B 55 355 298 HOH HOH . F 4 HOH B 56 356 84 HOH HOH . F 4 HOH B 57 357 332 HOH HOH . F 4 HOH B 58 358 175 HOH HOH . F 4 HOH B 59 359 339 HOH HOH . F 4 HOH B 60 360 152 HOH HOH . F 4 HOH B 61 361 171 HOH HOH . F 4 HOH B 62 362 2 HOH HOH . F 4 HOH B 63 363 96 HOH HOH . F 4 HOH B 64 364 223 HOH HOH . F 4 HOH B 65 365 26 HOH HOH . F 4 HOH B 66 366 54 HOH HOH . F 4 HOH B 67 367 71 HOH HOH . F 4 HOH B 68 368 72 HOH HOH . F 4 HOH B 69 369 103 HOH HOH . F 4 HOH B 70 370 284 HOH HOH . F 4 HOH B 71 371 197 HOH HOH . F 4 HOH B 72 372 140 HOH HOH . F 4 HOH B 73 373 24 HOH HOH . F 4 HOH B 74 374 6 HOH HOH . F 4 HOH B 75 375 75 HOH HOH . F 4 HOH B 76 376 55 HOH HOH . F 4 HOH B 77 377 156 HOH HOH . F 4 HOH B 78 378 114 HOH HOH . F 4 HOH B 79 379 205 HOH HOH . F 4 HOH B 80 380 173 HOH HOH . F 4 HOH B 81 381 149 HOH HOH . F 4 HOH B 82 382 91 HOH HOH . F 4 HOH B 83 383 147 HOH HOH . F 4 HOH B 84 384 56 HOH HOH . F 4 HOH B 85 385 137 HOH HOH . F 4 HOH B 86 386 150 HOH HOH . F 4 HOH B 87 387 46 HOH HOH . F 4 HOH B 88 388 222 HOH HOH . F 4 HOH B 89 389 108 HOH HOH . F 4 HOH B 90 390 22 HOH HOH . F 4 HOH B 91 391 201 HOH HOH . F 4 HOH B 92 392 109 HOH HOH . F 4 HOH B 93 393 187 HOH HOH . F 4 HOH B 94 394 239 HOH HOH . F 4 HOH B 95 395 296 HOH HOH . F 4 HOH B 96 396 110 HOH HOH . F 4 HOH B 97 397 99 HOH HOH . F 4 HOH B 98 398 190 HOH HOH . F 4 HOH B 99 399 66 HOH HOH . F 4 HOH B 100 400 61 HOH HOH . F 4 HOH B 101 401 179 HOH HOH . F 4 HOH B 102 402 48 HOH HOH . F 4 HOH B 103 403 280 HOH HOH . F 4 HOH B 104 404 265 HOH HOH . F 4 HOH B 105 405 311 HOH HOH . F 4 HOH B 106 406 301 HOH HOH . F 4 HOH B 107 407 107 HOH HOH . F 4 HOH B 108 408 276 HOH HOH . F 4 HOH B 109 409 165 HOH HOH . F 4 HOH B 110 410 62 HOH HOH . F 4 HOH B 111 411 178 HOH HOH . F 4 HOH B 112 412 253 HOH HOH . F 4 HOH B 113 413 44 HOH HOH . F 4 HOH B 114 414 320 HOH HOH . F 4 HOH B 115 415 64 HOH HOH . F 4 HOH B 116 416 183 HOH HOH . F 4 HOH B 117 417 212 HOH HOH . F 4 HOH B 118 418 133 HOH HOH . F 4 HOH B 119 419 206 HOH HOH . F 4 HOH B 120 420 163 HOH HOH . F 4 HOH B 121 421 303 HOH HOH . F 4 HOH B 122 422 343 HOH HOH . F 4 HOH B 123 423 307 HOH HOH . F 4 HOH B 124 424 155 HOH HOH . F 4 HOH B 125 425 78 HOH HOH . F 4 HOH B 126 426 87 HOH HOH . F 4 HOH B 127 427 287 HOH HOH . F 4 HOH B 128 428 233 HOH HOH . F 4 HOH B 129 429 144 HOH HOH . F 4 HOH B 130 430 300 HOH HOH . F 4 HOH B 131 431 194 HOH HOH . F 4 HOH B 132 432 86 HOH HOH . F 4 HOH B 133 433 161 HOH HOH . F 4 HOH B 134 434 337 HOH HOH . F 4 HOH B 135 435 342 HOH HOH . F 4 HOH B 136 436 247 HOH HOH . F 4 HOH B 137 437 220 HOH HOH . F 4 HOH B 138 438 34 HOH HOH . F 4 HOH B 139 439 274 HOH HOH . F 4 HOH B 140 440 317 HOH HOH . F 4 HOH B 141 441 121 HOH HOH . F 4 HOH B 142 442 341 HOH HOH . F 4 HOH B 143 443 138 HOH HOH . F 4 HOH B 144 444 289 HOH HOH . F 4 HOH B 145 445 323 HOH HOH . F 4 HOH B 146 446 236 HOH HOH . F 4 HOH B 147 447 234 HOH HOH . F 4 HOH B 148 448 315 HOH HOH . F 4 HOH B 149 449 227 HOH HOH . F 4 HOH B 150 450 319 HOH HOH . F 4 HOH B 151 451 217 HOH HOH . F 4 HOH B 152 452 256 HOH HOH . F 4 HOH B 153 453 63 HOH HOH . F 4 HOH B 154 454 306 HOH HOH . F 4 HOH B 155 455 221 HOH HOH . F 4 HOH B 156 456 264 HOH HOH . F 4 HOH B 157 457 333 HOH HOH . F 4 HOH B 158 458 184 HOH HOH . F 4 HOH B 159 459 312 HOH HOH . F 4 HOH B 160 460 308 HOH HOH . F 4 HOH B 161 461 122 HOH HOH . F 4 HOH B 162 462 309 HOH HOH . F 4 HOH B 163 463 211 HOH HOH . F 4 HOH B 164 464 260 HOH HOH . F 4 HOH B 165 465 255 HOH HOH . F 4 HOH B 166 466 268 HOH HOH . F 4 HOH B 167 467 321 HOH HOH . F 4 HOH B 168 468 261 HOH HOH . F 4 HOH B 169 469 191 HOH HOH . F 4 HOH B 170 470 259 HOH HOH . F 4 HOH B 171 471 158 HOH HOH . F 4 HOH B 172 472 305 HOH HOH . F 4 HOH B 173 473 271 HOH HOH . F 4 HOH B 174 474 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 -21.141 -0.975 -48.563 1 63.26 ? S DMS 202 B 1 HETATM 2 O O DMS . . . D 3 -20.554 -1.209 -49.948 1 69.91 ? O DMS 202 B 1 HETATM 3 C C1 DMS . . . D 3 -22.043 -2.447 -48.183 1 58.39 ? C1 DMS 202 B 1 HETATM 4 C C2 DMS . . . D 3 -22.526 0.128 -48.775 1 63.17 ? C2 DMS 202 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #