data_7GPK # _model_server_result.job_id 9E7ZLYRRcL1JOq_Q6oVT5w _model_server_result.datetime_utc '2024-11-05 08:23:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gpk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 7GPK # _exptl.entry_id 7GPK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GPK _cell.length_a 42.795 _cell.length_b 61.297 _cell.length_c 147.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GPK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F 1 1 B,C,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7GPK _atom_sites.fract_transf_matrix[1][1] 0.023367 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T0Y B 1 201 201 T0Y LIG . D 2 T0Y B 1 202 301 T0Y LIG . E 3 DMS B 1 203 302 DMS DMS . F 4 HOH A 1 201 281 HOH HOH . F 4 HOH A 2 202 258 HOH HOH . F 4 HOH A 3 203 197 HOH HOH . F 4 HOH A 4 204 74 HOH HOH . F 4 HOH A 5 205 248 HOH HOH . F 4 HOH A 6 206 5 HOH HOH . F 4 HOH A 7 207 82 HOH HOH . F 4 HOH A 8 208 49 HOH HOH . F 4 HOH A 9 209 52 HOH HOH . F 4 HOH A 10 210 98 HOH HOH . F 4 HOH A 11 211 181 HOH HOH . F 4 HOH A 12 212 31 HOH HOH . F 4 HOH A 13 213 10 HOH HOH . F 4 HOH A 14 214 225 HOH HOH . F 4 HOH A 15 215 100 HOH HOH . F 4 HOH A 16 216 135 HOH HOH . F 4 HOH A 17 217 105 HOH HOH . F 4 HOH A 18 218 115 HOH HOH . F 4 HOH A 19 219 40 HOH HOH . F 4 HOH A 20 220 210 HOH HOH . F 4 HOH A 21 221 279 HOH HOH . F 4 HOH A 22 222 57 HOH HOH . F 4 HOH A 23 223 94 HOH HOH . F 4 HOH A 24 224 18 HOH HOH . F 4 HOH A 25 225 89 HOH HOH . F 4 HOH A 26 226 7 HOH HOH . F 4 HOH A 27 227 32 HOH HOH . F 4 HOH A 28 228 15 HOH HOH . F 4 HOH A 29 229 340 HOH HOH . F 4 HOH A 30 230 53 HOH HOH . F 4 HOH A 31 231 216 HOH HOH . F 4 HOH A 32 232 245 HOH HOH . F 4 HOH A 33 233 117 HOH HOH . F 4 HOH A 34 234 25 HOH HOH . F 4 HOH A 35 235 28 HOH HOH . F 4 HOH A 36 236 116 HOH HOH . F 4 HOH A 37 237 297 HOH HOH . F 4 HOH A 38 238 41 HOH HOH . F 4 HOH A 39 239 93 HOH HOH . F 4 HOH A 40 240 331 HOH HOH . F 4 HOH A 41 241 20 HOH HOH . F 4 HOH A 42 242 97 HOH HOH . F 4 HOH A 43 243 242 HOH HOH . F 4 HOH A 44 244 83 HOH HOH . F 4 HOH A 45 245 51 HOH HOH . F 4 HOH A 46 246 153 HOH HOH . F 4 HOH A 47 247 70 HOH HOH . F 4 HOH A 48 248 88 HOH HOH . F 4 HOH A 49 249 215 HOH HOH . F 4 HOH A 50 250 3 HOH HOH . F 4 HOH A 51 251 58 HOH HOH . F 4 HOH A 52 252 129 HOH HOH . F 4 HOH A 53 253 50 HOH HOH . F 4 HOH A 54 254 185 HOH HOH . F 4 HOH A 55 255 164 HOH HOH . F 4 HOH A 56 256 204 HOH HOH . F 4 HOH A 57 257 11 HOH HOH . F 4 HOH A 58 258 182 HOH HOH . F 4 HOH A 59 259 154 HOH HOH . F 4 HOH A 60 260 118 HOH HOH . F 4 HOH A 61 261 112 HOH HOH . F 4 HOH A 62 262 299 HOH HOH . F 4 HOH A 63 263 336 HOH HOH . F 4 HOH A 64 264 244 HOH HOH . F 4 HOH A 65 265 43 HOH HOH . F 4 HOH A 66 266 172 HOH HOH . F 4 HOH A 67 267 127 HOH HOH . F 4 HOH A 68 268 30 HOH HOH . F 4 HOH A 69 269 29 HOH HOH . F 4 HOH A 70 270 160 HOH HOH . F 4 HOH A 71 271 232 HOH HOH . F 4 HOH A 72 272 132 HOH HOH . F 4 HOH A 73 273 250 HOH HOH . F 4 HOH A 74 274 65 HOH HOH . F 4 HOH A 75 275 213 HOH HOH . F 4 HOH A 76 276 120 HOH HOH . F 4 HOH A 77 277 60 HOH HOH . F 4 HOH A 78 278 302 HOH HOH . F 4 HOH A 79 279 113 HOH HOH . F 4 HOH A 80 280 95 HOH HOH . F 4 HOH A 81 281 12 HOH HOH . F 4 HOH A 82 282 146 HOH HOH . F 4 HOH A 83 283 23 HOH HOH . F 4 HOH A 84 284 328 HOH HOH . F 4 HOH A 85 285 85 HOH HOH . F 4 HOH A 86 286 104 HOH HOH . F 4 HOH A 87 287 73 HOH HOH . F 4 HOH A 88 288 235 HOH HOH . F 4 HOH A 89 289 285 HOH HOH . F 4 HOH A 90 290 224 HOH HOH . F 4 HOH A 91 291 293 HOH HOH . F 4 HOH A 92 292 263 HOH HOH . F 4 HOH A 93 293 291 HOH HOH . F 4 HOH A 94 294 323 HOH HOH . F 4 HOH A 95 295 159 HOH HOH . F 4 HOH A 96 296 322 HOH HOH . F 4 HOH A 97 297 218 HOH HOH . F 4 HOH A 98 298 168 HOH HOH . F 4 HOH A 99 299 238 HOH HOH . F 4 HOH A 100 300 16 HOH HOH . F 4 HOH A 101 301 251 HOH HOH . F 4 HOH A 102 302 304 HOH HOH . F 4 HOH A 103 303 124 HOH HOH . F 4 HOH A 104 304 81 HOH HOH . F 4 HOH A 105 305 292 HOH HOH . F 4 HOH A 106 306 189 HOH HOH . F 4 HOH A 107 307 229 HOH HOH . F 4 HOH A 108 308 67 HOH HOH . F 4 HOH A 109 309 157 HOH HOH . F 4 HOH A 110 310 209 HOH HOH . F 4 HOH A 111 311 123 HOH HOH . F 4 HOH A 112 312 126 HOH HOH . F 4 HOH A 113 313 196 HOH HOH . F 4 HOH A 114 314 180 HOH HOH . F 4 HOH A 115 315 47 HOH HOH . F 4 HOH A 116 316 111 HOH HOH . F 4 HOH A 117 317 294 HOH HOH . F 4 HOH A 118 318 316 HOH HOH . F 4 HOH A 119 319 186 HOH HOH . F 4 HOH A 120 320 337 HOH HOH . F 4 HOH A 121 321 257 HOH HOH . F 4 HOH A 122 322 246 HOH HOH . F 4 HOH A 123 323 345 HOH HOH . F 4 HOH A 124 324 167 HOH HOH . F 4 HOH A 125 325 141 HOH HOH . F 4 HOH A 126 326 226 HOH HOH . F 4 HOH A 127 327 21 HOH HOH . F 4 HOH A 128 328 310 HOH HOH . F 4 HOH A 129 329 282 HOH HOH . F 4 HOH A 130 330 339 HOH HOH . F 4 HOH A 131 331 195 HOH HOH . F 4 HOH A 132 332 254 HOH HOH . F 4 HOH A 133 333 170 HOH HOH . F 4 HOH A 134 334 283 HOH HOH . F 4 HOH A 135 335 219 HOH HOH . F 4 HOH A 136 336 199 HOH HOH . F 4 HOH A 137 337 207 HOH HOH . F 4 HOH A 138 338 241 HOH HOH . F 4 HOH A 139 339 198 HOH HOH . F 4 HOH A 140 340 240 HOH HOH . F 4 HOH A 141 341 208 HOH HOH . F 4 HOH A 142 342 275 HOH HOH . F 4 HOH A 143 343 338 HOH HOH . F 4 HOH A 144 344 203 HOH HOH . F 4 HOH A 145 345 92 HOH HOH . F 4 HOH A 146 346 313 HOH HOH . F 4 HOH A 147 347 45 HOH HOH . F 4 HOH A 148 348 192 HOH HOH . F 4 HOH A 149 349 131 HOH HOH . F 4 HOH A 150 350 243 HOH HOH . F 4 HOH A 151 351 214 HOH HOH . F 4 HOH A 152 352 334 HOH HOH . F 4 HOH A 153 353 333 HOH HOH . F 4 HOH A 154 354 174 HOH HOH . F 4 HOH A 155 355 346 HOH HOH . G 4 HOH B 1 301 128 HOH HOH . G 4 HOH B 2 302 277 HOH HOH . G 4 HOH B 3 303 4 HOH HOH . G 4 HOH B 4 304 343 HOH HOH . G 4 HOH B 5 305 288 HOH HOH . G 4 HOH B 6 306 231 HOH HOH . G 4 HOH B 7 307 289 HOH HOH . G 4 HOH B 8 308 76 HOH HOH . G 4 HOH B 9 309 162 HOH HOH . G 4 HOH B 10 310 102 HOH HOH . G 4 HOH B 11 311 145 HOH HOH . G 4 HOH B 12 312 295 HOH HOH . G 4 HOH B 13 313 1 HOH HOH . G 4 HOH B 14 314 318 HOH HOH . G 4 HOH B 15 315 9 HOH HOH . G 4 HOH B 16 316 38 HOH HOH . G 4 HOH B 17 317 6 HOH HOH . G 4 HOH B 18 318 200 HOH HOH . G 4 HOH B 19 319 212 HOH HOH . G 4 HOH B 20 320 68 HOH HOH . G 4 HOH B 21 321 341 HOH HOH . G 4 HOH B 22 322 36 HOH HOH . G 4 HOH B 23 323 284 HOH HOH . G 4 HOH B 24 324 90 HOH HOH . G 4 HOH B 25 325 17 HOH HOH . G 4 HOH B 26 326 286 HOH HOH . G 4 HOH B 27 327 84 HOH HOH . G 4 HOH B 28 328 136 HOH HOH . G 4 HOH B 29 329 26 HOH HOH . G 4 HOH B 30 330 324 HOH HOH . G 4 HOH B 31 331 69 HOH HOH . G 4 HOH B 32 332 142 HOH HOH . G 4 HOH B 33 333 101 HOH HOH . G 4 HOH B 34 334 119 HOH HOH . G 4 HOH B 35 335 179 HOH HOH . G 4 HOH B 36 336 19 HOH HOH . G 4 HOH B 37 337 8 HOH HOH . G 4 HOH B 38 338 42 HOH HOH . G 4 HOH B 39 339 253 HOH HOH . G 4 HOH B 40 340 252 HOH HOH . G 4 HOH B 41 341 77 HOH HOH . G 4 HOH B 42 342 173 HOH HOH . G 4 HOH B 43 343 171 HOH HOH . G 4 HOH B 44 344 35 HOH HOH . G 4 HOH B 45 345 22 HOH HOH . G 4 HOH B 46 346 177 HOH HOH . G 4 HOH B 47 347 59 HOH HOH . G 4 HOH B 48 348 56 HOH HOH . G 4 HOH B 49 349 37 HOH HOH . G 4 HOH B 50 350 147 HOH HOH . G 4 HOH B 51 351 71 HOH HOH . G 4 HOH B 52 352 2 HOH HOH . G 4 HOH B 53 353 14 HOH HOH . G 4 HOH B 54 354 247 HOH HOH . G 4 HOH B 55 355 184 HOH HOH . G 4 HOH B 56 356 91 HOH HOH . G 4 HOH B 57 357 149 HOH HOH . G 4 HOH B 58 358 326 HOH HOH . G 4 HOH B 59 359 139 HOH HOH . G 4 HOH B 60 360 27 HOH HOH . G 4 HOH B 61 361 125 HOH HOH . G 4 HOH B 62 362 201 HOH HOH . G 4 HOH B 63 363 79 HOH HOH . G 4 HOH B 64 364 156 HOH HOH . G 4 HOH B 65 365 144 HOH HOH . G 4 HOH B 66 366 72 HOH HOH . G 4 HOH B 67 367 46 HOH HOH . G 4 HOH B 68 368 303 HOH HOH . G 4 HOH B 69 369 175 HOH HOH . G 4 HOH B 70 370 54 HOH HOH . G 4 HOH B 71 371 140 HOH HOH . G 4 HOH B 72 372 39 HOH HOH . G 4 HOH B 73 373 24 HOH HOH . G 4 HOH B 74 374 222 HOH HOH . G 4 HOH B 75 375 266 HOH HOH . G 4 HOH B 76 376 278 HOH HOH . G 4 HOH B 77 377 110 HOH HOH . G 4 HOH B 78 378 96 HOH HOH . G 4 HOH B 79 379 55 HOH HOH . G 4 HOH B 80 380 267 HOH HOH . G 4 HOH B 81 381 121 HOH HOH . G 4 HOH B 82 382 152 HOH HOH . G 4 HOH B 83 383 332 HOH HOH . G 4 HOH B 84 384 108 HOH HOH . G 4 HOH B 85 385 296 HOH HOH . G 4 HOH B 86 386 190 HOH HOH . G 4 HOH B 87 387 320 HOH HOH . G 4 HOH B 88 388 99 HOH HOH . G 4 HOH B 89 389 301 HOH HOH . G 4 HOH B 90 390 48 HOH HOH . G 4 HOH B 91 391 163 HOH HOH . G 4 HOH B 92 392 165 HOH HOH . G 4 HOH B 93 393 137 HOH HOH . G 4 HOH B 94 394 107 HOH HOH . G 4 HOH B 95 395 223 HOH HOH . G 4 HOH B 96 396 109 HOH HOH . G 4 HOH B 97 397 166 HOH HOH . G 4 HOH B 98 398 75 HOH HOH . G 4 HOH B 99 399 103 HOH HOH . G 4 HOH B 100 400 256 HOH HOH . G 4 HOH B 101 401 64 HOH HOH . G 4 HOH B 102 402 314 HOH HOH . G 4 HOH B 103 403 66 HOH HOH . G 4 HOH B 104 404 150 HOH HOH . G 4 HOH B 105 405 187 HOH HOH . G 4 HOH B 106 406 330 HOH HOH . G 4 HOH B 107 407 114 HOH HOH . G 4 HOH B 108 408 335 HOH HOH . G 4 HOH B 109 409 106 HOH HOH . G 4 HOH B 110 410 62 HOH HOH . G 4 HOH B 111 411 329 HOH HOH . G 4 HOH B 112 412 161 HOH HOH . G 4 HOH B 113 413 276 HOH HOH . G 4 HOH B 114 414 268 HOH HOH . G 4 HOH B 115 415 34 HOH HOH . G 4 HOH B 116 416 233 HOH HOH . G 4 HOH B 117 417 206 HOH HOH . G 4 HOH B 118 418 183 HOH HOH . G 4 HOH B 119 419 78 HOH HOH . G 4 HOH B 120 420 44 HOH HOH . G 4 HOH B 121 421 61 HOH HOH . G 4 HOH B 122 422 325 HOH HOH . G 4 HOH B 123 423 80 HOH HOH . G 4 HOH B 124 424 230 HOH HOH . G 4 HOH B 125 425 327 HOH HOH . G 4 HOH B 126 426 205 HOH HOH . G 4 HOH B 127 427 298 HOH HOH . G 4 HOH B 128 428 86 HOH HOH . G 4 HOH B 129 429 287 HOH HOH . G 4 HOH B 130 430 134 HOH HOH . G 4 HOH B 131 431 272 HOH HOH . G 4 HOH B 132 432 148 HOH HOH . G 4 HOH B 133 433 220 HOH HOH . G 4 HOH B 134 434 234 HOH HOH . G 4 HOH B 135 435 138 HOH HOH . G 4 HOH B 136 436 315 HOH HOH . G 4 HOH B 137 437 133 HOH HOH . G 4 HOH B 138 438 239 HOH HOH . G 4 HOH B 139 439 311 HOH HOH . G 4 HOH B 140 440 280 HOH HOH . G 4 HOH B 141 441 87 HOH HOH . G 4 HOH B 142 442 178 HOH HOH . G 4 HOH B 143 443 155 HOH HOH . G 4 HOH B 144 444 194 HOH HOH . G 4 HOH B 145 445 169 HOH HOH . G 4 HOH B 146 446 274 HOH HOH . G 4 HOH B 147 447 265 HOH HOH . G 4 HOH B 148 448 342 HOH HOH . G 4 HOH B 149 449 130 HOH HOH . G 4 HOH B 150 450 344 HOH HOH . G 4 HOH B 151 451 347 HOH HOH . G 4 HOH B 152 452 321 HOH HOH . G 4 HOH B 153 453 227 HOH HOH . G 4 HOH B 154 454 312 HOH HOH . G 4 HOH B 155 455 306 HOH HOH . G 4 HOH B 156 456 249 HOH HOH . G 4 HOH B 157 457 237 HOH HOH . G 4 HOH B 158 458 221 HOH HOH . G 4 HOH B 159 459 308 HOH HOH . G 4 HOH B 160 460 122 HOH HOH . G 4 HOH B 161 461 309 HOH HOH . G 4 HOH B 162 462 269 HOH HOH . G 4 HOH B 163 463 63 HOH HOH . G 4 HOH B 164 464 317 HOH HOH . G 4 HOH B 165 465 348 HOH HOH . G 4 HOH B 166 466 260 HOH HOH . G 4 HOH B 167 467 217 HOH HOH . G 4 HOH B 168 468 319 HOH HOH . G 4 HOH B 169 469 264 HOH HOH . G 4 HOH B 170 470 255 HOH HOH . G 4 HOH B 171 471 211 HOH HOH . G 4 HOH B 172 472 33 HOH HOH . G 4 HOH B 173 473 259 HOH HOH . G 4 HOH B 174 474 261 HOH HOH . G 4 HOH B 175 475 158 HOH HOH . G 4 HOH B 176 476 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 3 -7.412 -14.457 -35.515 1 66.32 ? S DMS 203 B 1 HETATM 2 O O DMS . . . E 3 -8.064 -14.679 -36.854 1 64.54 ? O DMS 203 B 1 HETATM 3 C C1 DMS . . . E 3 -7.45 -12.7 -35.261 1 66.01 ? C1 DMS 203 B 1 HETATM 4 C C2 DMS . . . E 3 -5.669 -14.661 -35.78 1 65.47 ? C2 DMS 203 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #