data_7GQN # _model_server_result.job_id NX7OvTy4jRUsCbjcykzdqQ _model_server_result.datetime_utc '2024-10-10 23:30:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gqn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 7GQN # _exptl.entry_id 7GQN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 193.974 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-iodo-1H-imidazole _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GQN _cell.length_a 42.792 _cell.length_b 62.797 _cell.length_c 147.439 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GQN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H3 I N2' _chem_comp.formula_weight 193.974 _chem_comp.id U0O _chem_comp.mon_nstd_flag . _chem_comp.name 5-iodo-1H-imidazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 U0O sing 330 n y N1 C U0O sing 331 n y C2 N U0O doub 332 n y I C U0O sing 333 n n C C1 U0O doub 334 n y N C1 U0O sing 335 n y N1 H1 U0O sing 336 n n C1 H3 U0O sing 337 n n C2 H4 U0O sing 338 n n # _atom_sites.entry_id 7GQN _atom_sites.fract_transf_matrix[1][1] 0.023369 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015924 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 U0O A 1 201 201 U0O LIG . D 2 U0O A 1 202 301 U0O LIG . E 2 U0O B 1 201 201 U0O LIG . F 3 HOH A 1 301 83 HOH HOH . F 3 HOH A 2 302 281 HOH HOH . F 3 HOH A 3 303 82 HOH HOH . F 3 HOH A 4 304 245 HOH HOH . F 3 HOH A 5 305 215 HOH HOH . F 3 HOH A 6 306 32 HOH HOH . F 3 HOH A 7 307 210 HOH HOH . F 3 HOH A 8 308 193 HOH HOH . F 3 HOH A 9 309 242 HOH HOH . F 3 HOH A 10 310 53 HOH HOH . F 3 HOH A 11 311 248 HOH HOH . F 3 HOH A 12 312 292 HOH HOH . F 3 HOH A 13 313 127 HOH HOH . F 3 HOH A 14 314 7 HOH HOH . F 3 HOH A 15 315 29 HOH HOH . F 3 HOH A 16 316 57 HOH HOH . F 3 HOH A 17 317 15 HOH HOH . F 3 HOH A 18 318 10 HOH HOH . F 3 HOH A 19 319 297 HOH HOH . F 3 HOH A 20 320 49 HOH HOH . F 3 HOH A 21 321 116 HOH HOH . F 3 HOH A 22 322 225 HOH HOH . F 3 HOH A 23 323 204 HOH HOH . F 3 HOH A 24 324 52 HOH HOH . F 3 HOH A 25 325 216 HOH HOH . F 3 HOH A 26 326 89 HOH HOH . F 3 HOH A 27 327 115 HOH HOH . F 3 HOH A 28 328 51 HOH HOH . F 3 HOH A 29 329 154 HOH HOH . F 3 HOH A 30 330 40 HOH HOH . F 3 HOH A 31 331 100 HOH HOH . F 3 HOH A 32 332 117 HOH HOH . F 3 HOH A 33 333 18 HOH HOH . F 3 HOH A 34 334 258 HOH HOH . F 3 HOH A 35 335 105 HOH HOH . F 3 HOH A 36 336 25 HOH HOH . F 3 HOH A 37 337 112 HOH HOH . F 3 HOH A 38 338 58 HOH HOH . F 3 HOH A 39 339 279 HOH HOH . F 3 HOH A 40 340 185 HOH HOH . F 3 HOH A 41 341 31 HOH HOH . F 3 HOH A 42 342 93 HOH HOH . F 3 HOH A 43 343 95 HOH HOH . F 3 HOH A 44 344 135 HOH HOH . F 3 HOH A 45 345 94 HOH HOH . F 3 HOH A 46 346 50 HOH HOH . F 3 HOH A 47 347 41 HOH HOH . F 3 HOH A 48 348 43 HOH HOH . F 3 HOH A 49 349 299 HOH HOH . F 3 HOH A 50 350 98 HOH HOH . F 3 HOH A 51 351 3 HOH HOH . F 3 HOH A 52 352 13 HOH HOH . F 3 HOH A 53 353 11 HOH HOH . F 3 HOH A 54 354 263 HOH HOH . F 3 HOH A 55 355 118 HOH HOH . F 3 HOH A 56 356 65 HOH HOH . F 3 HOH A 57 357 153 HOH HOH . F 3 HOH A 58 358 293 HOH HOH . F 3 HOH A 59 359 213 HOH HOH . F 3 HOH A 60 360 285 HOH HOH . F 3 HOH A 61 361 291 HOH HOH . F 3 HOH A 62 362 182 HOH HOH . F 3 HOH A 63 363 120 HOH HOH . F 3 HOH A 64 364 85 HOH HOH . F 3 HOH A 65 365 20 HOH HOH . F 3 HOH A 66 366 97 HOH HOH . F 3 HOH A 67 367 244 HOH HOH . F 3 HOH A 68 368 104 HOH HOH . F 3 HOH A 69 369 113 HOH HOH . F 3 HOH A 70 370 257 HOH HOH . F 3 HOH A 71 371 172 HOH HOH . F 3 HOH A 72 372 192 HOH HOH . F 3 HOH A 73 373 168 HOH HOH . F 3 HOH A 74 374 67 HOH HOH . F 3 HOH A 75 375 70 HOH HOH . F 3 HOH A 76 376 235 HOH HOH . F 3 HOH A 77 377 12 HOH HOH . F 3 HOH A 78 378 262 HOH HOH . F 3 HOH A 79 379 60 HOH HOH . F 3 HOH A 80 380 73 HOH HOH . F 3 HOH A 81 381 250 HOH HOH . F 3 HOH A 82 382 180 HOH HOH . F 3 HOH A 83 383 146 HOH HOH . F 3 HOH A 84 384 129 HOH HOH . F 3 HOH A 85 385 23 HOH HOH . F 3 HOH A 86 386 132 HOH HOH . F 3 HOH A 87 387 218 HOH HOH . F 3 HOH A 88 388 160 HOH HOH . F 3 HOH A 89 389 181 HOH HOH . F 3 HOH A 90 390 128 HOH HOH . F 3 HOH A 91 391 106 HOH HOH . F 3 HOH A 92 392 229 HOH HOH . F 3 HOH A 93 393 249 HOH HOH . F 3 HOH A 94 394 124 HOH HOH . F 3 HOH A 95 395 126 HOH HOH . F 3 HOH A 96 396 123 HOH HOH . F 3 HOH A 97 397 196 HOH HOH . F 3 HOH A 98 398 21 HOH HOH . F 3 HOH A 99 399 238 HOH HOH . F 3 HOH A 100 400 189 HOH HOH . F 3 HOH A 101 401 16 HOH HOH . F 3 HOH A 102 402 81 HOH HOH . F 3 HOH A 103 403 209 HOH HOH . F 3 HOH A 104 404 30 HOH HOH . F 3 HOH A 105 405 294 HOH HOH . F 3 HOH A 106 406 304 HOH HOH . F 3 HOH A 107 407 159 HOH HOH . F 3 HOH A 108 408 226 HOH HOH . F 3 HOH A 109 409 88 HOH HOH . F 3 HOH A 110 410 316 HOH HOH . F 3 HOH A 111 411 151 HOH HOH . F 3 HOH A 112 412 111 HOH HOH . F 3 HOH A 113 413 167 HOH HOH . F 3 HOH A 114 414 283 HOH HOH . F 3 HOH A 115 415 47 HOH HOH . F 3 HOH A 116 416 219 HOH HOH . F 3 HOH A 117 417 273 HOH HOH . F 3 HOH A 118 418 246 HOH HOH . F 3 HOH A 119 419 186 HOH HOH . F 3 HOH A 120 420 141 HOH HOH . F 3 HOH A 121 421 254 HOH HOH . F 3 HOH A 122 422 282 HOH HOH . F 3 HOH A 123 423 310 HOH HOH . F 3 HOH A 124 424 199 HOH HOH . F 3 HOH A 125 425 198 HOH HOH . F 3 HOH A 126 426 240 HOH HOH . F 3 HOH A 127 427 207 HOH HOH . F 3 HOH A 128 428 241 HOH HOH . F 3 HOH A 129 429 208 HOH HOH . F 3 HOH A 130 430 188 HOH HOH . F 3 HOH A 131 431 275 HOH HOH . F 3 HOH A 132 432 195 HOH HOH . F 3 HOH A 133 433 170 HOH HOH . F 3 HOH A 134 434 203 HOH HOH . F 3 HOH A 135 435 92 HOH HOH . F 3 HOH A 136 436 45 HOH HOH . F 3 HOH A 137 437 243 HOH HOH . F 3 HOH A 138 438 131 HOH HOH . F 3 HOH A 139 439 251 HOH HOH . F 3 HOH A 140 440 290 HOH HOH . F 3 HOH A 141 441 214 HOH HOH . F 3 HOH A 142 442 266 HOH HOH . F 3 HOH A 143 443 174 HOH HOH . G 3 HOH B 1 301 272 HOH HOH . G 3 HOH B 2 302 134 HOH HOH . G 3 HOH B 3 303 286 HOH HOH . G 3 HOH B 4 304 4 HOH HOH . G 3 HOH B 5 305 230 HOH HOH . G 3 HOH B 6 306 231 HOH HOH . G 3 HOH B 7 307 288 HOH HOH . G 3 HOH B 8 308 5 HOH HOH . G 3 HOH B 9 309 145 HOH HOH . G 3 HOH B 10 310 175 HOH HOH . G 3 HOH B 11 311 59 HOH HOH . G 3 HOH B 12 312 169 HOH HOH . G 3 HOH B 13 313 125 HOH HOH . G 3 HOH B 14 314 69 HOH HOH . G 3 HOH B 15 315 177 HOH HOH . G 3 HOH B 16 316 130 HOH HOH . G 3 HOH B 17 317 200 HOH HOH . G 3 HOH B 18 318 9 HOH HOH . G 3 HOH B 19 319 139 HOH HOH . G 3 HOH B 20 320 295 HOH HOH . G 3 HOH B 21 321 34 HOH HOH . G 3 HOH B 22 322 42 HOH HOH . G 3 HOH B 23 323 8 HOH HOH . G 3 HOH B 24 324 166 HOH HOH . G 3 HOH B 25 325 152 HOH HOH . G 3 HOH B 26 326 252 HOH HOH . G 3 HOH B 27 327 103 HOH HOH . G 3 HOH B 28 328 1 HOH HOH . G 3 HOH B 29 329 277 HOH HOH . G 3 HOH B 30 330 68 HOH HOH . G 3 HOH B 31 331 79 HOH HOH . G 3 HOH B 32 332 284 HOH HOH . G 3 HOH B 33 333 171 HOH HOH . G 3 HOH B 34 334 80 HOH HOH . G 3 HOH B 35 335 90 HOH HOH . G 3 HOH B 36 336 77 HOH HOH . G 3 HOH B 37 337 102 HOH HOH . G 3 HOH B 38 338 101 HOH HOH . G 3 HOH B 39 339 119 HOH HOH . G 3 HOH B 40 340 17 HOH HOH . G 3 HOH B 41 341 142 HOH HOH . G 3 HOH B 42 342 37 HOH HOH . G 3 HOH B 43 343 84 HOH HOH . G 3 HOH B 44 344 38 HOH HOH . G 3 HOH B 45 345 156 HOH HOH . G 3 HOH B 46 346 148 HOH HOH . G 3 HOH B 47 347 35 HOH HOH . G 3 HOH B 48 348 39 HOH HOH . G 3 HOH B 49 349 19 HOH HOH . G 3 HOH B 50 350 162 HOH HOH . G 3 HOH B 51 351 36 HOH HOH . G 3 HOH B 52 352 96 HOH HOH . G 3 HOH B 53 353 76 HOH HOH . G 3 HOH B 54 354 27 HOH HOH . G 3 HOH B 55 355 2 HOH HOH . G 3 HOH B 56 356 26 HOH HOH . G 3 HOH B 57 357 14 HOH HOH . G 3 HOH B 58 358 54 HOH HOH . G 3 HOH B 59 359 72 HOH HOH . G 3 HOH B 60 360 179 HOH HOH . G 3 HOH B 61 361 91 HOH HOH . G 3 HOH B 62 362 307 HOH HOH . G 3 HOH B 63 363 33 HOH HOH . G 3 HOH B 64 364 147 HOH HOH . G 3 HOH B 65 365 136 HOH HOH . G 3 HOH B 66 366 190 HOH HOH . G 3 HOH B 67 367 223 HOH HOH . G 3 HOH B 68 368 267 HOH HOH . G 3 HOH B 69 369 55 HOH HOH . G 3 HOH B 70 370 173 HOH HOH . G 3 HOH B 71 371 75 HOH HOH . G 3 HOH B 72 372 108 HOH HOH . G 3 HOH B 73 373 187 HOH HOH . G 3 HOH B 74 374 149 HOH HOH . G 3 HOH B 75 375 6 HOH HOH . G 3 HOH B 76 376 140 HOH HOH . G 3 HOH B 77 377 296 HOH HOH . G 3 HOH B 78 378 71 HOH HOH . G 3 HOH B 79 379 239 HOH HOH . G 3 HOH B 80 380 24 HOH HOH . G 3 HOH B 81 381 201 HOH HOH . G 3 HOH B 82 382 22 HOH HOH . G 3 HOH B 83 383 114 HOH HOH . G 3 HOH B 84 384 56 HOH HOH . G 3 HOH B 85 385 46 HOH HOH . G 3 HOH B 86 386 205 HOH HOH . G 3 HOH B 87 387 109 HOH HOH . G 3 HOH B 88 388 99 HOH HOH . G 3 HOH B 89 389 253 HOH HOH . G 3 HOH B 90 390 247 HOH HOH . G 3 HOH B 91 391 137 HOH HOH . G 3 HOH B 92 392 61 HOH HOH . G 3 HOH B 93 393 280 HOH HOH . G 3 HOH B 94 394 197 HOH HOH . G 3 HOH B 95 395 62 HOH HOH . G 3 HOH B 96 396 66 HOH HOH . G 3 HOH B 97 397 110 HOH HOH . G 3 HOH B 98 398 64 HOH HOH . G 3 HOH B 99 399 314 HOH HOH . G 3 HOH B 100 400 107 HOH HOH . G 3 HOH B 101 401 222 HOH HOH . G 3 HOH B 102 402 150 HOH HOH . G 3 HOH B 103 403 265 HOH HOH . G 3 HOH B 104 404 155 HOH HOH . G 3 HOH B 105 405 48 HOH HOH . G 3 HOH B 106 406 301 HOH HOH . G 3 HOH B 107 407 206 HOH HOH . G 3 HOH B 108 408 165 HOH HOH . G 3 HOH B 109 409 224 HOH HOH . G 3 HOH B 110 410 298 HOH HOH . G 3 HOH B 111 411 133 HOH HOH . G 3 HOH B 112 412 194 HOH HOH . G 3 HOH B 113 413 44 HOH HOH . G 3 HOH B 114 414 287 HOH HOH . G 3 HOH B 115 415 183 HOH HOH . G 3 HOH B 116 416 163 HOH HOH . G 3 HOH B 117 417 78 HOH HOH . G 3 HOH B 118 418 276 HOH HOH . G 3 HOH B 119 419 300 HOH HOH . G 3 HOH B 120 420 233 HOH HOH . G 3 HOH B 121 421 178 HOH HOH . G 3 HOH B 122 422 315 HOH HOH . G 3 HOH B 123 423 212 HOH HOH . G 3 HOH B 124 424 303 HOH HOH . G 3 HOH B 125 425 268 HOH HOH . G 3 HOH B 126 426 278 HOH HOH . G 3 HOH B 127 427 144 HOH HOH . G 3 HOH B 128 428 311 HOH HOH . G 3 HOH B 129 429 87 HOH HOH . G 3 HOH B 130 430 86 HOH HOH . G 3 HOH B 131 431 161 HOH HOH . G 3 HOH B 132 432 220 HOH HOH . G 3 HOH B 133 433 138 HOH HOH . G 3 HOH B 134 434 121 HOH HOH . G 3 HOH B 135 435 274 HOH HOH . G 3 HOH B 136 436 312 HOH HOH . G 3 HOH B 137 437 236 HOH HOH . G 3 HOH B 138 438 234 HOH HOH . G 3 HOH B 139 439 289 HOH HOH . G 3 HOH B 140 440 308 HOH HOH . G 3 HOH B 141 441 256 HOH HOH . G 3 HOH B 142 442 237 HOH HOH . G 3 HOH B 143 443 217 HOH HOH . G 3 HOH B 144 444 306 HOH HOH . G 3 HOH B 145 445 63 HOH HOH . G 3 HOH B 146 446 221 HOH HOH . G 3 HOH B 147 447 227 HOH HOH . G 3 HOH B 148 448 184 HOH HOH . G 3 HOH B 149 449 232 HOH HOH . G 3 HOH B 150 450 211 HOH HOH . G 3 HOH B 151 451 269 HOH HOH . G 3 HOH B 152 452 122 HOH HOH . G 3 HOH B 153 453 309 HOH HOH . G 3 HOH B 154 454 260 HOH HOH . G 3 HOH B 155 455 264 HOH HOH . G 3 HOH B 156 456 255 HOH HOH . G 3 HOH B 157 457 261 HOH HOH . G 3 HOH B 158 458 259 HOH HOH . G 3 HOH B 159 459 158 HOH HOH . G 3 HOH B 160 460 271 HOH HOH . G 3 HOH B 161 461 191 HOH HOH . G 3 HOH B 162 462 305 HOH HOH . G 3 HOH B 163 463 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 U0O . . . E 2 0.688 -1.664 -52.31 0.16 33.21 ? N1 U0O 201 B 1 HETATM 2 N N U0O . . . E 2 -0.177 -3.686 -52.105 0.16 30.63 ? N U0O 201 B 1 HETATM 3 C C U0O . . . E 2 1.688 -2.582 -52.176 0.16 33.35 ? C U0O 201 B 1 HETATM 4 C C1 U0O . . . E 2 1.182 -3.835 -52.041 0.16 32.88 ? C1 U0O 201 B 1 HETATM 5 C C2 U0O . . . E 2 -0.423 -2.38 -52.264 0.16 30.74 ? C2 U0O 201 B 1 HETATM 6 I I U0O . . . E 2 3.686 -2.043 -52.233 0.16 40.38 ? I U0O 201 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #