data_7GRR
#
_model_server_result.job_id            PaYKYUuKVQgRD0bT32QoRw 
_model_server_result.datetime_utc      '2024-11-06 00:38:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7grr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    7GRR 
#
_exptl.entry_id    7GRR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7GRR 
_cell.length_a            67.77 
_cell.length_b            100.55 
_cell.length_c            104.08 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7GRR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O ASN 221 B ASN 221 1_555 J MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
metalc ? metalc2 B OD1 ASN 221 B ASN 221 1_555 J MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc3 B O PHE 223 B PHE 223 1_555 J MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc4 B O ASP 263 B ASP 263 1_555 J MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.997 ? 
metalc ? metalc5 B OD1 ASP 263 B ASP 263 1_555 J MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc6 J MG MG . B MG 404 1_555 L O HOH . B HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7GRR 
_atom_sites.fract_transf_matrix[1][1]    0.014756 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009945 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009608 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DMS A 1 501 501 DMS DMS . 
D 3 Y0O A 1 502 601 Y0O LIG . 
E 2 DMS A 1 503 602 DMS DMS . 
F 4 SO4 A 1 504 2 SO4 SO4 . 
G 2 DMS B 1 401 401 DMS DMS . 
H 2 DMS B 1 402 501 DMS DMS . 
I 4 SO4 B 1 403 1 SO4 SO4 . 
J 5 MG B 1 404 1 MG MG . 
K 6 HOH A 1 601 220 HOH HOH . 
K 6 HOH A 2 602 42 HOH HOH . 
K 6 HOH A 3 603 205 HOH HOH . 
K 6 HOH A 4 604 169 HOH HOH . 
K 6 HOH A 5 605 66 HOH HOH . 
K 6 HOH A 6 606 3 HOH HOH . 
K 6 HOH A 7 607 39 HOH HOH . 
K 6 HOH A 8 608 53 HOH HOH . 
K 6 HOH A 9 609 23 HOH HOH . 
K 6 HOH A 10 610 204 HOH HOH . 
K 6 HOH A 11 611 144 HOH HOH . 
K 6 HOH A 12 612 6 HOH HOH . 
K 6 HOH A 13 613 79 HOH HOH . 
K 6 HOH A 14 614 11 HOH HOH . 
K 6 HOH A 15 615 212 HOH HOH . 
K 6 HOH A 16 616 115 HOH HOH . 
K 6 HOH A 17 617 108 HOH HOH . 
K 6 HOH A 18 618 183 HOH HOH . 
K 6 HOH A 19 619 14 HOH HOH . 
K 6 HOH A 20 620 123 HOH HOH . 
K 6 HOH A 21 621 76 HOH HOH . 
K 6 HOH A 22 622 216 HOH HOH . 
K 6 HOH A 23 623 196 HOH HOH . 
K 6 HOH A 24 624 84 HOH HOH . 
K 6 HOH A 25 625 159 HOH HOH . 
K 6 HOH A 26 626 153 HOH HOH . 
K 6 HOH A 27 627 28 HOH HOH . 
K 6 HOH A 28 628 198 HOH HOH . 
K 6 HOH A 29 629 162 HOH HOH . 
K 6 HOH A 30 630 147 HOH HOH . 
K 6 HOH A 31 631 70 HOH HOH . 
K 6 HOH A 32 632 61 HOH HOH . 
K 6 HOH A 33 633 18 HOH HOH . 
K 6 HOH A 34 634 57 HOH HOH . 
K 6 HOH A 35 635 99 HOH HOH . 
K 6 HOH A 36 636 34 HOH HOH . 
K 6 HOH A 37 637 72 HOH HOH . 
K 6 HOH A 38 638 64 HOH HOH . 
K 6 HOH A 39 639 44 HOH HOH . 
K 6 HOH A 40 640 40 HOH HOH . 
K 6 HOH A 41 641 49 HOH HOH . 
K 6 HOH A 42 642 77 HOH HOH . 
K 6 HOH A 43 643 105 HOH HOH . 
K 6 HOH A 44 644 207 HOH HOH . 
K 6 HOH A 45 645 68 HOH HOH . 
K 6 HOH A 46 646 59 HOH HOH . 
K 6 HOH A 47 647 4 HOH HOH . 
K 6 HOH A 48 648 180 HOH HOH . 
K 6 HOH A 49 649 33 HOH HOH . 
K 6 HOH A 50 650 87 HOH HOH . 
K 6 HOH A 51 651 26 HOH HOH . 
K 6 HOH A 52 652 203 HOH HOH . 
K 6 HOH A 53 653 100 HOH HOH . 
K 6 HOH A 54 654 16 HOH HOH . 
K 6 HOH A 55 655 186 HOH HOH . 
K 6 HOH A 56 656 58 HOH HOH . 
K 6 HOH A 57 657 7 HOH HOH . 
K 6 HOH A 58 658 65 HOH HOH . 
K 6 HOH A 59 659 133 HOH HOH . 
K 6 HOH A 60 660 35 HOH HOH . 
K 6 HOH A 61 661 89 HOH HOH . 
K 6 HOH A 62 662 150 HOH HOH . 
K 6 HOH A 63 663 20 HOH HOH . 
K 6 HOH A 64 664 120 HOH HOH . 
K 6 HOH A 65 665 96 HOH HOH . 
K 6 HOH A 66 666 163 HOH HOH . 
K 6 HOH A 67 667 46 HOH HOH . 
K 6 HOH A 68 668 155 HOH HOH . 
K 6 HOH A 69 669 21 HOH HOH . 
K 6 HOH A 70 670 30 HOH HOH . 
K 6 HOH A 71 671 78 HOH HOH . 
K 6 HOH A 72 672 41 HOH HOH . 
K 6 HOH A 73 673 75 HOH HOH . 
K 6 HOH A 74 674 32 HOH HOH . 
K 6 HOH A 75 675 67 HOH HOH . 
K 6 HOH A 76 676 83 HOH HOH . 
K 6 HOH A 77 677 51 HOH HOH . 
K 6 HOH A 78 678 116 HOH HOH . 
K 6 HOH A 79 679 106 HOH HOH . 
K 6 HOH A 80 680 52 HOH HOH . 
K 6 HOH A 81 681 29 HOH HOH . 
K 6 HOH A 82 682 178 HOH HOH . 
K 6 HOH A 83 683 117 HOH HOH . 
K 6 HOH A 84 684 22 HOH HOH . 
K 6 HOH A 85 685 9 HOH HOH . 
K 6 HOH A 86 686 223 HOH HOH . 
K 6 HOH A 87 687 56 HOH HOH . 
K 6 HOH A 88 688 50 HOH HOH . 
K 6 HOH A 89 689 103 HOH HOH . 
K 6 HOH A 90 690 54 HOH HOH . 
K 6 HOH A 91 691 107 HOH HOH . 
K 6 HOH A 92 692 60 HOH HOH . 
K 6 HOH A 93 693 139 HOH HOH . 
K 6 HOH A 94 694 97 HOH HOH . 
K 6 HOH A 95 695 156 HOH HOH . 
K 6 HOH A 96 696 131 HOH HOH . 
K 6 HOH A 97 697 184 HOH HOH . 
K 6 HOH A 98 698 62 HOH HOH . 
K 6 HOH A 99 699 104 HOH HOH . 
K 6 HOH A 100 700 136 HOH HOH . 
K 6 HOH A 101 701 17 HOH HOH . 
K 6 HOH A 102 702 114 HOH HOH . 
K 6 HOH A 103 703 128 HOH HOH . 
K 6 HOH A 104 704 140 HOH HOH . 
K 6 HOH A 105 705 55 HOH HOH . 
K 6 HOH A 106 706 188 HOH HOH . 
K 6 HOH A 107 707 221 HOH HOH . 
K 6 HOH A 108 708 213 HOH HOH . 
K 6 HOH A 109 709 185 HOH HOH . 
K 6 HOH A 110 710 118 HOH HOH . 
K 6 HOH A 111 711 164 HOH HOH . 
K 6 HOH A 112 712 179 HOH HOH . 
K 6 HOH A 113 713 86 HOH HOH . 
K 6 HOH A 114 714 190 HOH HOH . 
K 6 HOH A 115 715 1 HOH HOH . 
K 6 HOH A 116 716 112 HOH HOH . 
K 6 HOH A 117 717 2 HOH HOH . 
K 6 HOH A 118 718 142 HOH HOH . 
K 6 HOH A 119 719 211 HOH HOH . 
K 6 HOH A 120 720 197 HOH HOH . 
K 6 HOH A 121 721 121 HOH HOH . 
K 6 HOH A 122 722 130 HOH HOH . 
K 6 HOH A 123 723 37 HOH HOH . 
K 6 HOH A 124 724 168 HOH HOH . 
K 6 HOH A 125 725 88 HOH HOH . 
K 6 HOH A 126 726 38 HOH HOH . 
K 6 HOH A 127 727 47 HOH HOH . 
K 6 HOH A 128 728 94 HOH HOH . 
K 6 HOH A 129 729 187 HOH HOH . 
K 6 HOH A 130 730 215 HOH HOH . 
K 6 HOH A 131 731 73 HOH HOH . 
K 6 HOH A 132 732 210 HOH HOH . 
K 6 HOH A 133 733 202 HOH HOH . 
K 6 HOH A 134 734 200 HOH HOH . 
K 6 HOH A 135 735 167 HOH HOH . 
K 6 HOH A 136 736 81 HOH HOH . 
K 6 HOH A 137 737 214 HOH HOH . 
K 6 HOH A 138 738 201 HOH HOH . 
K 6 HOH A 139 739 165 HOH HOH . 
L 6 HOH B 1 501 101 HOH HOH . 
L 6 HOH B 2 502 151 HOH HOH . 
L 6 HOH B 3 503 175 HOH HOH . 
L 6 HOH B 4 504 177 HOH HOH . 
L 6 HOH B 5 505 111 HOH HOH . 
L 6 HOH B 6 506 206 HOH HOH . 
L 6 HOH B 7 507 171 HOH HOH . 
L 6 HOH B 8 508 125 HOH HOH . 
L 6 HOH B 9 509 208 HOH HOH . 
L 6 HOH B 10 510 110 HOH HOH . 
L 6 HOH B 11 511 209 HOH HOH . 
L 6 HOH B 12 512 222 HOH HOH . 
L 6 HOH B 13 513 63 HOH HOH . 
L 6 HOH B 14 514 74 HOH HOH . 
L 6 HOH B 15 515 127 HOH HOH . 
L 6 HOH B 16 516 149 HOH HOH . 
L 6 HOH B 17 517 132 HOH HOH . 
L 6 HOH B 18 518 19 HOH HOH . 
L 6 HOH B 19 519 113 HOH HOH . 
L 6 HOH B 20 520 82 HOH HOH . 
L 6 HOH B 21 521 15 HOH HOH . 
L 6 HOH B 22 522 181 HOH HOH . 
L 6 HOH B 23 523 85 HOH HOH . 
L 6 HOH B 24 524 48 HOH HOH . 
L 6 HOH B 25 525 25 HOH HOH . 
L 6 HOH B 26 526 31 HOH HOH . 
L 6 HOH B 27 527 13 HOH HOH . 
L 6 HOH B 28 528 182 HOH HOH . 
L 6 HOH B 29 529 124 HOH HOH . 
L 6 HOH B 30 530 5 HOH HOH . 
L 6 HOH B 31 531 69 HOH HOH . 
L 6 HOH B 32 532 36 HOH HOH . 
L 6 HOH B 33 533 141 HOH HOH . 
L 6 HOH B 34 534 170 HOH HOH . 
L 6 HOH B 35 535 189 HOH HOH . 
L 6 HOH B 36 536 122 HOH HOH . 
L 6 HOH B 37 537 27 HOH HOH . 
L 6 HOH B 38 538 137 HOH HOH . 
L 6 HOH B 39 539 217 HOH HOH . 
L 6 HOH B 40 540 71 HOH HOH . 
L 6 HOH B 41 541 102 HOH HOH . 
L 6 HOH B 42 542 24 HOH HOH . 
L 6 HOH B 43 543 10 HOH HOH . 
L 6 HOH B 44 544 43 HOH HOH . 
L 6 HOH B 45 545 45 HOH HOH . 
L 6 HOH B 46 546 143 HOH HOH . 
L 6 HOH B 47 547 160 HOH HOH . 
L 6 HOH B 48 548 152 HOH HOH . 
L 6 HOH B 49 549 219 HOH HOH . 
L 6 HOH B 50 550 148 HOH HOH . 
L 6 HOH B 51 551 145 HOH HOH . 
L 6 HOH B 52 552 158 HOH HOH . 
L 6 HOH B 53 553 218 HOH HOH . 
L 6 HOH B 54 554 192 HOH HOH . 
L 6 HOH B 55 555 90 HOH HOH . 
L 6 HOH B 56 556 173 HOH HOH . 
L 6 HOH B 57 557 91 HOH HOH . 
L 6 HOH B 58 558 93 HOH HOH . 
L 6 HOH B 59 559 126 HOH HOH . 
L 6 HOH B 60 560 157 HOH HOH . 
L 6 HOH B 61 561 172 HOH HOH . 
L 6 HOH B 62 562 109 HOH HOH . 
L 6 HOH B 63 563 8 HOH HOH . 
L 6 HOH B 64 564 80 HOH HOH . 
L 6 HOH B 65 565 154 HOH HOH . 
L 6 HOH B 66 566 176 HOH HOH . 
L 6 HOH B 67 567 129 HOH HOH . 
L 6 HOH B 68 568 95 HOH HOH . 
L 6 HOH B 69 569 191 HOH HOH . 
L 6 HOH B 70 570 119 HOH HOH . 
L 6 HOH B 71 571 194 HOH HOH . 
L 6 HOH B 72 572 12 HOH HOH . 
L 6 HOH B 73 573 92 HOH HOH . 
L 6 HOH B 74 574 135 HOH HOH . 
L 6 HOH B 75 575 195 HOH HOH . 
L 6 HOH B 76 576 161 HOH HOH . 
L 6 HOH B 77 577 199 HOH HOH . 
L 6 HOH B 78 578 166 HOH HOH . 
L 6 HOH B 79 579 193 HOH HOH . 
L 6 HOH B 80 580 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . C 2 -16.773 -4.745 -24.922 1 45.09 ? S DMS 501 A 1 
HETATM 2 O O DMS . . . C 2 -16.109 -3.759 -25.783 1 30.2 ? O DMS 501 A 1 
HETATM 3 C C1 DMS . . . C 2 -16.465 -6.416 -25.593 1 33.33 ? C1 DMS 501 A 1 
HETATM 4 C C2 DMS . . . C 2 -18.542 -4.597 -25.379 1 29.18 ? C2 DMS 501 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#