data_7GSC # _model_server_result.job_id U-T7u_7HQBpmbLZFKFaB5g _model_server_result.datetime_utc '2024-11-22 06:04:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gsc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7GSC # _exptl.entry_id 7GSC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 239.261 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (azepan-1-yl)(2,6-difluorophenyl)methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GSC _cell.length_a 89.603 _cell.length_b 89.603 _cell.length_c 106.375 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GSC _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H15 F2 N O' _chem_comp.formula_weight 239.261 _chem_comp.id WLJ _chem_comp.mon_nstd_flag . _chem_comp.name (azepan-1-yl)(2,6-difluorophenyl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C15 WLJ sing 395 n n C16 C17 WLJ sing 396 n n F01 C02 WLJ sing 397 n n O10 C09 WLJ doub 398 n n C15 C14 WLJ sing 399 n n C17 N11 WLJ sing 400 n n C09 N11 WLJ sing 401 n n C09 C08 WLJ sing 402 n n C02 C08 WLJ doub 403 n y C02 C03 WLJ sing 404 n y C14 C13 WLJ sing 405 n n N11 C12 WLJ sing 406 n n C08 C06 WLJ sing 407 n y C03 C04 WLJ doub 408 n y C13 C12 WLJ sing 409 n n C06 F07 WLJ sing 410 n n C06 C05 WLJ doub 411 n y C04 C05 WLJ sing 412 n y C13 H1 WLJ sing 413 n n C13 H2 WLJ sing 414 n n C15 H3 WLJ sing 415 n n C15 H4 WLJ sing 416 n n C17 H5 WLJ sing 417 n n C17 H6 WLJ sing 418 n n C03 H7 WLJ sing 419 n n C04 H8 WLJ sing 420 n n C05 H9 WLJ sing 421 n n C12 H10 WLJ sing 422 n n C12 H11 WLJ sing 423 n n C14 H12 WLJ sing 424 n n C14 H13 WLJ sing 425 n n C16 H14 WLJ sing 426 n n C16 H15 WLJ sing 427 n n # _atom_sites.entry_id 7GSC _atom_sites.fract_transf_matrix[1][1] 0.01116 _atom_sites.fract_transf_matrix[1][2] 0.006443 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009401 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 401 500 TRS TRS . C 3 WLJ A 1 402 301 WLJ LIG . D 4 HOH A 1 501 692 HOH HOH . D 4 HOH A 2 502 576 HOH HOH . D 4 HOH A 3 503 678 HOH HOH . D 4 HOH A 4 504 632 HOH HOH . D 4 HOH A 5 505 673 HOH HOH . D 4 HOH A 6 506 654 HOH HOH . D 4 HOH A 7 507 589 HOH HOH . D 4 HOH A 8 508 627 HOH HOH . D 4 HOH A 9 509 621 HOH HOH . D 4 HOH A 10 510 695 HOH HOH . D 4 HOH A 11 511 482 HOH HOH . D 4 HOH A 12 512 517 HOH HOH . D 4 HOH A 13 513 628 HOH HOH . D 4 HOH A 14 514 569 HOH HOH . D 4 HOH A 15 515 688 HOH HOH . D 4 HOH A 16 516 464 HOH HOH . D 4 HOH A 17 517 421 HOH HOH . D 4 HOH A 18 518 465 HOH HOH . D 4 HOH A 19 519 470 HOH HOH . D 4 HOH A 20 520 491 HOH HOH . D 4 HOH A 21 521 419 HOH HOH . D 4 HOH A 22 522 423 HOH HOH . D 4 HOH A 23 523 402 HOH HOH . D 4 HOH A 24 524 689 HOH HOH . D 4 HOH A 25 525 448 HOH HOH . D 4 HOH A 26 526 664 HOH HOH . D 4 HOH A 27 527 536 HOH HOH . D 4 HOH A 28 528 528 HOH HOH . D 4 HOH A 29 529 698 HOH HOH . D 4 HOH A 30 530 441 HOH HOH . D 4 HOH A 31 531 666 HOH HOH . D 4 HOH A 32 532 580 HOH HOH . D 4 HOH A 33 533 587 HOH HOH . D 4 HOH A 34 534 413 HOH HOH . D 4 HOH A 35 535 461 HOH HOH . D 4 HOH A 36 536 566 HOH HOH . D 4 HOH A 37 537 435 HOH HOH . D 4 HOH A 38 538 693 HOH HOH . D 4 HOH A 39 539 434 HOH HOH . D 4 HOH A 40 540 429 HOH HOH . D 4 HOH A 41 541 611 HOH HOH . D 4 HOH A 42 542 406 HOH HOH . D 4 HOH A 43 543 430 HOH HOH . D 4 HOH A 44 544 466 HOH HOH . D 4 HOH A 45 545 676 HOH HOH . D 4 HOH A 46 546 409 HOH HOH . D 4 HOH A 47 547 590 HOH HOH . D 4 HOH A 48 548 493 HOH HOH . D 4 HOH A 49 549 549 HOH HOH . D 4 HOH A 50 550 524 HOH HOH . D 4 HOH A 51 551 658 HOH HOH . D 4 HOH A 52 552 405 HOH HOH . D 4 HOH A 53 553 412 HOH HOH . D 4 HOH A 54 554 417 HOH HOH . D 4 HOH A 55 555 404 HOH HOH . D 4 HOH A 56 556 414 HOH HOH . D 4 HOH A 57 557 507 HOH HOH . D 4 HOH A 58 558 554 HOH HOH . D 4 HOH A 59 559 479 HOH HOH . D 4 HOH A 60 560 696 HOH HOH . D 4 HOH A 61 561 407 HOH HOH . D 4 HOH A 62 562 631 HOH HOH . D 4 HOH A 63 563 683 HOH HOH . D 4 HOH A 64 564 559 HOH HOH . D 4 HOH A 65 565 704 HOH HOH . D 4 HOH A 66 566 605 HOH HOH . D 4 HOH A 67 567 467 HOH HOH . D 4 HOH A 68 568 504 HOH HOH . D 4 HOH A 69 569 431 HOH HOH . D 4 HOH A 70 570 411 HOH HOH . D 4 HOH A 71 571 625 HOH HOH . D 4 HOH A 72 572 452 HOH HOH . D 4 HOH A 73 573 443 HOH HOH . D 4 HOH A 74 574 426 HOH HOH . D 4 HOH A 75 575 660 HOH HOH . D 4 HOH A 76 576 427 HOH HOH . D 4 HOH A 77 577 460 HOH HOH . D 4 HOH A 78 578 410 HOH HOH . D 4 HOH A 79 579 556 HOH HOH . D 4 HOH A 80 580 577 HOH HOH . D 4 HOH A 81 581 497 HOH HOH . D 4 HOH A 82 582 449 HOH HOH . D 4 HOH A 83 583 408 HOH HOH . D 4 HOH A 84 584 509 HOH HOH . D 4 HOH A 85 585 447 HOH HOH . D 4 HOH A 86 586 669 HOH HOH . D 4 HOH A 87 587 635 HOH HOH . D 4 HOH A 88 588 415 HOH HOH . D 4 HOH A 89 589 657 HOH HOH . D 4 HOH A 90 590 521 HOH HOH . D 4 HOH A 91 591 619 HOH HOH . D 4 HOH A 92 592 403 HOH HOH . D 4 HOH A 93 593 446 HOH HOH . D 4 HOH A 94 594 633 HOH HOH . D 4 HOH A 95 595 490 HOH HOH . D 4 HOH A 96 596 540 HOH HOH . D 4 HOH A 97 597 668 HOH HOH . D 4 HOH A 98 598 530 HOH HOH . D 4 HOH A 99 599 636 HOH HOH . D 4 HOH A 100 600 437 HOH HOH . D 4 HOH A 101 601 489 HOH HOH . D 4 HOH A 102 602 503 HOH HOH . D 4 HOH A 103 603 520 HOH HOH . D 4 HOH A 104 604 477 HOH HOH . D 4 HOH A 105 605 616 HOH HOH . D 4 HOH A 106 606 486 HOH HOH . D 4 HOH A 107 607 436 HOH HOH . D 4 HOH A 108 608 444 HOH HOH . D 4 HOH A 109 609 468 HOH HOH . D 4 HOH A 110 610 469 HOH HOH . D 4 HOH A 111 611 496 HOH HOH . D 4 HOH A 112 612 459 HOH HOH . D 4 HOH A 113 613 463 HOH HOH . D 4 HOH A 114 614 424 HOH HOH . D 4 HOH A 115 615 418 HOH HOH . D 4 HOH A 116 616 533 HOH HOH . D 4 HOH A 117 617 440 HOH HOH . D 4 HOH A 118 618 638 HOH HOH . D 4 HOH A 119 619 475 HOH HOH . D 4 HOH A 120 620 505 HOH HOH . D 4 HOH A 121 621 455 HOH HOH . D 4 HOH A 122 622 450 HOH HOH . D 4 HOH A 123 623 451 HOH HOH . D 4 HOH A 124 624 546 HOH HOH . D 4 HOH A 125 625 481 HOH HOH . D 4 HOH A 126 626 700 HOH HOH . D 4 HOH A 127 627 699 HOH HOH . D 4 HOH A 128 628 420 HOH HOH . D 4 HOH A 129 629 575 HOH HOH . D 4 HOH A 130 630 526 HOH HOH . D 4 HOH A 131 631 522 HOH HOH . D 4 HOH A 132 632 492 HOH HOH . D 4 HOH A 133 633 519 HOH HOH . D 4 HOH A 134 634 675 HOH HOH . D 4 HOH A 135 635 697 HOH HOH . D 4 HOH A 136 636 602 HOH HOH . D 4 HOH A 137 637 543 HOH HOH . D 4 HOH A 138 638 456 HOH HOH . D 4 HOH A 139 639 488 HOH HOH . D 4 HOH A 140 640 422 HOH HOH . D 4 HOH A 141 641 561 HOH HOH . D 4 HOH A 142 642 416 HOH HOH . D 4 HOH A 143 643 513 HOH HOH . D 4 HOH A 144 644 439 HOH HOH . D 4 HOH A 145 645 438 HOH HOH . D 4 HOH A 146 646 442 HOH HOH . D 4 HOH A 147 647 672 HOH HOH . D 4 HOH A 148 648 527 HOH HOH . D 4 HOH A 149 649 648 HOH HOH . D 4 HOH A 150 650 478 HOH HOH . D 4 HOH A 151 651 484 HOH HOH . D 4 HOH A 152 652 458 HOH HOH . D 4 HOH A 153 653 553 HOH HOH . D 4 HOH A 154 654 454 HOH HOH . D 4 HOH A 155 655 551 HOH HOH . D 4 HOH A 156 656 539 HOH HOH . D 4 HOH A 157 657 552 HOH HOH . D 4 HOH A 158 658 535 HOH HOH . D 4 HOH A 159 659 498 HOH HOH . D 4 HOH A 160 660 476 HOH HOH . D 4 HOH A 161 661 562 HOH HOH . D 4 HOH A 162 662 432 HOH HOH . D 4 HOH A 163 663 457 HOH HOH . D 4 HOH A 164 664 661 HOH HOH . D 4 HOH A 165 665 624 HOH HOH . D 4 HOH A 166 666 563 HOH HOH . D 4 HOH A 167 667 702 HOH HOH . D 4 HOH A 168 668 472 HOH HOH . D 4 HOH A 169 669 679 HOH HOH . D 4 HOH A 170 670 510 HOH HOH . D 4 HOH A 171 671 665 HOH HOH . D 4 HOH A 172 672 637 HOH HOH . D 4 HOH A 173 673 514 HOH HOH . D 4 HOH A 174 674 598 HOH HOH . D 4 HOH A 175 675 567 HOH HOH . D 4 HOH A 176 676 701 HOH HOH . D 4 HOH A 177 677 560 HOH HOH . D 4 HOH A 178 678 684 HOH HOH . D 4 HOH A 179 679 690 HOH HOH . D 4 HOH A 180 680 653 HOH HOH . D 4 HOH A 181 681 614 HOH HOH . D 4 HOH A 182 682 523 HOH HOH . D 4 HOH A 183 683 542 HOH HOH . D 4 HOH A 184 684 647 HOH HOH . D 4 HOH A 185 685 555 HOH HOH . D 4 HOH A 186 686 594 HOH HOH . D 4 HOH A 187 687 597 HOH HOH . D 4 HOH A 188 688 502 HOH HOH . D 4 HOH A 189 689 565 HOH HOH . D 4 HOH A 190 690 656 HOH HOH . D 4 HOH A 191 691 618 HOH HOH . D 4 HOH A 192 692 453 HOH HOH . D 4 HOH A 193 693 685 HOH HOH . D 4 HOH A 194 694 538 HOH HOH . D 4 HOH A 195 695 483 HOH HOH . D 4 HOH A 196 696 687 HOH HOH . D 4 HOH A 197 697 694 HOH HOH . D 4 HOH A 198 698 659 HOH HOH . D 4 HOH A 199 699 462 HOH HOH . D 4 HOH A 200 700 630 HOH HOH . D 4 HOH A 201 701 674 HOH HOH . D 4 HOH A 202 702 541 HOH HOH . D 4 HOH A 203 703 682 HOH HOH . D 4 HOH A 204 704 433 HOH HOH . D 4 HOH A 205 705 617 HOH HOH . D 4 HOH A 206 706 487 HOH HOH . D 4 HOH A 207 707 574 HOH HOH . D 4 HOH A 208 708 652 HOH HOH . D 4 HOH A 209 709 662 HOH HOH . D 4 HOH A 210 710 677 HOH HOH . D 4 HOH A 211 711 595 HOH HOH . D 4 HOH A 212 712 579 HOH HOH . D 4 HOH A 213 713 529 HOH HOH . D 4 HOH A 214 714 650 HOH HOH . D 4 HOH A 215 715 670 HOH HOH . D 4 HOH A 216 716 651 HOH HOH . D 4 HOH A 217 717 703 HOH HOH . D 4 HOH A 218 718 649 HOH HOH . D 4 HOH A 219 719 663 HOH HOH . D 4 HOH A 220 720 471 HOH HOH . D 4 HOH A 221 721 655 HOH HOH . D 4 HOH A 222 722 606 HOH HOH . D 4 HOH A 223 723 512 HOH HOH . D 4 HOH A 224 724 686 HOH HOH . D 4 HOH A 225 725 608 HOH HOH . D 4 HOH A 226 726 681 HOH HOH . D 4 HOH A 227 727 525 HOH HOH . D 4 HOH A 228 728 671 HOH HOH . D 4 HOH A 229 729 548 HOH HOH . D 4 HOH A 230 730 518 HOH HOH . D 4 HOH A 231 731 596 HOH HOH . D 4 HOH A 232 732 578 HOH HOH . D 4 HOH A 233 733 473 HOH HOH . D 4 HOH A 234 734 667 HOH HOH . D 4 HOH A 235 735 680 HOH HOH . D 4 HOH A 236 736 643 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 WLJ . . . C 3 -55.999 30.945 -2.499 0.48 43.55 ? C13 WLJ 402 A 1 HETATM 2 C C15 WLJ . . . C 3 -55.681 31.883 -4.768 0.48 45.6 ? C15 WLJ 402 A 1 HETATM 3 C C17 WLJ . . . C 3 -56.381 33.981 -3.336 0.48 49.93 ? C17 WLJ 402 A 1 HETATM 4 C C02 WLJ . . . C 3 -60.614 32.137 -1.586 0.48 58.7 ? C02 WLJ 402 A 1 HETATM 5 C C03 WLJ . . . C 3 -61.595 31.512 -0.776 0.48 57.35 ? C03 WLJ 402 A 1 HETATM 6 C C04 WLJ . . . C 3 -61.64 31.788 0.586 0.48 58.16 ? C04 WLJ 402 A 1 HETATM 7 C C05 WLJ . . . C 3 -60.719 32.677 1.127 0.48 56.52 ? C05 WLJ 402 A 1 HETATM 8 C C06 WLJ . . . C 3 -59.753 33.29 0.294 0.48 57.5 ? C06 WLJ 402 A 1 HETATM 9 C C08 WLJ . . . C 3 -59.64 33.055 -1.123 0.48 56.82 ? C08 WLJ 402 A 1 HETATM 10 C C09 WLJ . . . C 3 -58.532 33.791 -1.911 0.48 56.67 ? C09 WLJ 402 A 1 HETATM 11 C C12 WLJ . . . C 3 -57.311 31.691 -2.496 0.48 46.76 ? C12 WLJ 402 A 1 HETATM 12 C C14 WLJ . . . C 3 -55.494 30.667 -3.886 0.48 41.62 ? C14 WLJ 402 A 1 HETATM 13 C C16 WLJ . . . C 3 -55.266 33.189 -4.092 0.48 46.44 ? C16 WLJ 402 A 1 HETATM 14 F F01 WLJ . . . C 3 -60.707 31.757 -2.86 0.48 57.72 ? F01 WLJ 402 A 1 HETATM 15 F F07 WLJ . . . C 3 -58.919 34.118 0.903 0.48 55.11 ? F07 WLJ 402 A 1 HETATM 16 N N11 WLJ . . . C 3 -57.426 33.165 -2.58 0.48 50.75 ? N11 WLJ 402 A 1 HETATM 17 O O10 WLJ . . . C 3 -58.623 35.022 -1.982 0.48 58.42 ? O10 WLJ 402 A 1 HETATM 18 H H1 WLJ . . . C 3 -55.28 31.584 -1.939 0.48 43.8 ? H1 WLJ 402 A 1 HETATM 19 H H2 WLJ . . . C 3 -56.076 30.038 -1.883 0.48 43.73 ? H2 WLJ 402 A 1 HETATM 20 H H3 WLJ . . . C 3 -55.088 31.749 -5.693 0.48 44.81 ? H3 WLJ 402 A 1 HETATM 21 H H4 WLJ . . . C 3 -56.729 31.935 -5.128 0.48 44.83 ? H4 WLJ 402 A 1 HETATM 22 H H5 WLJ . . . C 3 -56.889 34.635 -4.082 0.48 49.28 ? H5 WLJ 402 A 1 HETATM 23 H H6 WLJ . . . C 3 -55.885 34.716 -2.657 0.48 49.28 ? H6 WLJ 402 A 1 HETATM 24 H H7 WLJ . . . C 3 -62.296 30.817 -1.244 0.48 57.78 ? H7 WLJ 402 A 1 HETATM 25 H H8 WLJ . . . C 3 -62.401 31.297 1.196 0.48 57.55 ? H8 WLJ 402 A 1 HETATM 26 H H9 WLJ . . . C 3 -60.761 32.891 2.195 0.48 57.14 ? H9 WLJ 402 A 1 HETATM 27 H H10 WLJ . . . C 3 -57.962 31.238 -3.29 0.48 46.87 ? H10 WLJ 402 A 1 HETATM 28 H H11 WLJ . . . C 3 -57.677 31.424 -1.481 0.48 46.91 ? H11 WLJ 402 A 1 HETATM 29 H H12 WLJ . . . C 3 -54.431 30.345 -3.868 0.48 42.98 ? H12 WLJ 402 A 1 HETATM 30 H H13 WLJ . . . C 3 -56.019 29.781 -4.303 0.48 42.98 ? H13 WLJ 402 A 1 HETATM 31 H H14 WLJ . . . C 3 -54.383 33.035 -3.437 0.48 47.02 ? H14 WLJ 402 A 1 HETATM 32 H H15 WLJ . . . C 3 -54.847 33.843 -4.886 0.48 47.04 ? H15 WLJ 402 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #