data_7GSE # _model_server_result.job_id hbqlEv58QGIk7mpltk_mBg _model_server_result.datetime_utc '2024-11-13 07:15:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gse # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7GSE # _exptl.entry_id 7GSE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GSE _cell.length_a 89.88 _cell.length_b 89.88 _cell.length_c 106.761 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GSE _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 367 n n C C2 TRS sing 368 n n C C3 TRS sing 369 n n C N TRS sing 370 n n C1 O1 TRS sing 371 n n C1 H11 TRS sing 372 n n C1 H12 TRS sing 373 n n C2 O2 TRS sing 374 n n C2 H21 TRS sing 375 n n C2 H22 TRS sing 376 n n C3 O3 TRS sing 377 n n C3 H31 TRS sing 378 n n C3 H32 TRS sing 379 n n N HN1 TRS sing 380 n n N HN2 TRS sing 381 n n N HN3 TRS sing 382 n n O1 HO1 TRS sing 383 n n O2 HO2 TRS sing 384 n n O3 HO3 TRS sing 385 n n # _atom_sites.entry_id 7GSE _atom_sites.fract_transf_matrix[1][1] 0.011126 _atom_sites.fract_transf_matrix[1][2] 0.006424 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012847 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 401 500 TRS TRS . C 3 T1J A 1 402 301 T1J LIG . D 4 HOH A 1 501 692 HOH HOH . D 4 HOH A 2 502 576 HOH HOH . D 4 HOH A 3 503 696 HOH HOH . D 4 HOH A 4 504 632 HOH HOH . D 4 HOH A 5 505 621 HOH HOH . D 4 HOH A 6 506 673 HOH HOH . D 4 HOH A 7 507 517 HOH HOH . D 4 HOH A 8 508 589 HOH HOH . D 4 HOH A 9 509 470 HOH HOH . D 4 HOH A 10 510 524 HOH HOH . D 4 HOH A 11 511 482 HOH HOH . D 4 HOH A 12 512 704 HOH HOH . D 4 HOH A 13 513 654 HOH HOH . D 4 HOH A 14 514 685 HOH HOH . D 4 HOH A 15 515 464 HOH HOH . D 4 HOH A 16 516 421 HOH HOH . D 4 HOH A 17 517 501 HOH HOH . D 4 HOH A 18 518 693 HOH HOH . D 4 HOH A 19 519 664 HOH HOH . D 4 HOH A 20 520 566 HOH HOH . D 4 HOH A 21 521 643 HOH HOH . D 4 HOH A 22 522 491 HOH HOH . D 4 HOH A 23 523 437 HOH HOH . D 4 HOH A 24 524 611 HOH HOH . D 4 HOH A 25 525 423 HOH HOH . D 4 HOH A 26 526 689 HOH HOH . D 4 HOH A 27 527 419 HOH HOH . D 4 HOH A 28 528 634 HOH HOH . D 4 HOH A 29 529 507 HOH HOH . D 4 HOH A 30 530 497 HOH HOH . D 4 HOH A 31 531 436 HOH HOH . D 4 HOH A 32 532 569 HOH HOH . D 4 HOH A 33 533 466 HOH HOH . D 4 HOH A 34 534 695 HOH HOH . D 4 HOH A 35 535 587 HOH HOH . D 4 HOH A 36 536 605 HOH HOH . D 4 HOH A 37 537 448 HOH HOH . D 4 HOH A 38 538 628 HOH HOH . D 4 HOH A 39 539 703 HOH HOH . D 4 HOH A 40 540 474 HOH HOH . D 4 HOH A 41 541 427 HOH HOH . D 4 HOH A 42 542 450 HOH HOH . D 4 HOH A 43 543 402 HOH HOH . D 4 HOH A 44 544 520 HOH HOH . D 4 HOH A 45 545 658 HOH HOH . D 4 HOH A 46 546 434 HOH HOH . D 4 HOH A 47 547 404 HOH HOH . D 4 HOH A 48 548 435 HOH HOH . D 4 HOH A 49 549 666 HOH HOH . D 4 HOH A 50 550 540 HOH HOH . D 4 HOH A 51 551 461 HOH HOH . D 4 HOH A 52 552 687 HOH HOH . D 4 HOH A 53 553 408 HOH HOH . D 4 HOH A 54 554 688 HOH HOH . D 4 HOH A 55 555 405 HOH HOH . D 4 HOH A 56 556 625 HOH HOH . D 4 HOH A 57 557 449 HOH HOH . D 4 HOH A 58 558 627 HOH HOH . D 4 HOH A 59 559 412 HOH HOH . D 4 HOH A 60 560 493 HOH HOH . D 4 HOH A 61 561 538 HOH HOH . D 4 HOH A 62 562 676 HOH HOH . D 4 HOH A 63 563 683 HOH HOH . D 4 HOH A 64 564 452 HOH HOH . D 4 HOH A 65 565 556 HOH HOH . D 4 HOH A 66 566 465 HOH HOH . D 4 HOH A 67 567 581 HOH HOH . D 4 HOH A 68 568 426 HOH HOH . D 4 HOH A 69 569 481 HOH HOH . D 4 HOH A 70 570 638 HOH HOH . D 4 HOH A 71 571 414 HOH HOH . D 4 HOH A 72 572 410 HOH HOH . D 4 HOH A 73 573 631 HOH HOH . D 4 HOH A 74 574 417 HOH HOH . D 4 HOH A 75 575 407 HOH HOH . D 4 HOH A 76 576 411 HOH HOH . D 4 HOH A 77 577 413 HOH HOH . D 4 HOH A 78 578 700 HOH HOH . D 4 HOH A 79 579 635 HOH HOH . D 4 HOH A 80 580 431 HOH HOH . D 4 HOH A 81 581 528 HOH HOH . D 4 HOH A 82 582 619 HOH HOH . D 4 HOH A 83 583 406 HOH HOH . D 4 HOH A 84 584 486 HOH HOH . D 4 HOH A 85 585 549 HOH HOH . D 4 HOH A 86 586 522 HOH HOH . D 4 HOH A 87 587 444 HOH HOH . D 4 HOH A 88 588 504 HOH HOH . D 4 HOH A 89 589 536 HOH HOH . D 4 HOH A 90 590 409 HOH HOH . D 4 HOH A 91 591 575 HOH HOH . D 4 HOH A 92 592 440 HOH HOH . D 4 HOH A 93 593 429 HOH HOH . D 4 HOH A 94 594 684 HOH HOH . D 4 HOH A 95 595 443 HOH HOH . D 4 HOH A 96 596 446 HOH HOH . D 4 HOH A 97 597 552 HOH HOH . D 4 HOH A 98 598 479 HOH HOH . D 4 HOH A 99 599 475 HOH HOH . D 4 HOH A 100 600 633 HOH HOH . D 4 HOH A 101 601 503 HOH HOH . D 4 HOH A 102 602 467 HOH HOH . D 4 HOH A 103 603 460 HOH HOH . D 4 HOH A 104 604 455 HOH HOH . D 4 HOH A 105 605 559 HOH HOH . D 4 HOH A 106 606 602 HOH HOH . D 4 HOH A 107 607 519 HOH HOH . D 4 HOH A 108 608 580 HOH HOH . D 4 HOH A 109 609 539 HOH HOH . D 4 HOH A 110 610 403 HOH HOH . D 4 HOH A 111 611 438 HOH HOH . D 4 HOH A 112 612 447 HOH HOH . D 4 HOH A 113 613 415 HOH HOH . D 4 HOH A 114 614 577 HOH HOH . D 4 HOH A 115 615 533 HOH HOH . D 4 HOH A 116 616 468 HOH HOH . D 4 HOH A 117 617 509 HOH HOH . D 4 HOH A 118 618 616 HOH HOH . D 4 HOH A 119 619 698 HOH HOH . D 4 HOH A 120 620 594 HOH HOH . D 4 HOH A 121 621 430 HOH HOH . D 4 HOH A 122 622 668 HOH HOH . D 4 HOH A 123 623 416 HOH HOH . D 4 HOH A 124 624 484 HOH HOH . D 4 HOH A 125 625 441 HOH HOH . D 4 HOH A 126 626 702 HOH HOH . D 4 HOH A 127 627 554 HOH HOH . D 4 HOH A 128 628 424 HOH HOH . D 4 HOH A 129 629 418 HOH HOH . D 4 HOH A 130 630 489 HOH HOH . D 4 HOH A 131 631 567 HOH HOH . D 4 HOH A 132 632 496 HOH HOH . D 4 HOH A 133 633 675 HOH HOH . D 4 HOH A 134 634 561 HOH HOH . D 4 HOH A 135 635 420 HOH HOH . D 4 HOH A 136 636 697 HOH HOH . D 4 HOH A 137 637 553 HOH HOH . D 4 HOH A 138 638 614 HOH HOH . D 4 HOH A 139 639 660 HOH HOH . D 4 HOH A 140 640 513 HOH HOH . D 4 HOH A 141 641 459 HOH HOH . D 4 HOH A 142 642 530 HOH HOH . D 4 HOH A 143 643 521 HOH HOH . D 4 HOH A 144 644 677 HOH HOH . D 4 HOH A 145 645 563 HOH HOH . D 4 HOH A 146 646 648 HOH HOH . D 4 HOH A 147 647 562 HOH HOH . D 4 HOH A 148 648 454 HOH HOH . D 4 HOH A 149 649 546 HOH HOH . D 4 HOH A 150 650 439 HOH HOH . D 4 HOH A 151 651 422 HOH HOH . D 4 HOH A 152 652 458 HOH HOH . D 4 HOH A 153 653 505 HOH HOH . D 4 HOH A 154 654 551 HOH HOH . D 4 HOH A 155 655 669 HOH HOH . D 4 HOH A 156 656 543 HOH HOH . D 4 HOH A 157 657 442 HOH HOH . D 4 HOH A 158 658 672 HOH HOH . D 4 HOH A 159 659 478 HOH HOH . D 4 HOH A 160 660 477 HOH HOH . D 4 HOH A 161 661 502 HOH HOH . D 4 HOH A 162 662 463 HOH HOH . D 4 HOH A 163 663 456 HOH HOH . D 4 HOH A 164 664 457 HOH HOH . D 4 HOH A 165 665 636 HOH HOH . D 4 HOH A 166 666 472 HOH HOH . D 4 HOH A 167 667 657 HOH HOH . D 4 HOH A 168 668 492 HOH HOH . D 4 HOH A 169 669 618 HOH HOH . D 4 HOH A 170 670 535 HOH HOH . D 4 HOH A 171 671 624 HOH HOH . D 4 HOH A 172 672 527 HOH HOH . D 4 HOH A 173 673 555 HOH HOH . D 4 HOH A 174 674 646 HOH HOH . D 4 HOH A 175 675 498 HOH HOH . D 4 HOH A 176 676 526 HOH HOH . D 4 HOH A 177 677 506 HOH HOH . D 4 HOH A 178 678 432 HOH HOH . D 4 HOH A 179 679 476 HOH HOH . D 4 HOH A 180 680 514 HOH HOH . D 4 HOH A 181 681 510 HOH HOH . D 4 HOH A 182 682 653 HOH HOH . D 4 HOH A 183 683 637 HOH HOH . D 4 HOH A 184 684 490 HOH HOH . D 4 HOH A 185 685 469 HOH HOH . D 4 HOH A 186 686 662 HOH HOH . D 4 HOH A 187 687 560 HOH HOH . D 4 HOH A 188 688 701 HOH HOH . D 4 HOH A 189 689 488 HOH HOH . D 4 HOH A 190 690 523 HOH HOH . D 4 HOH A 191 691 690 HOH HOH . D 4 HOH A 192 692 647 HOH HOH . D 4 HOH A 193 693 659 HOH HOH . D 4 HOH A 194 694 598 HOH HOH . D 4 HOH A 195 695 665 HOH HOH . D 4 HOH A 196 696 451 HOH HOH . D 4 HOH A 197 697 483 HOH HOH . D 4 HOH A 198 698 656 HOH HOH . D 4 HOH A 199 699 542 HOH HOH . D 4 HOH A 200 700 617 HOH HOH . D 4 HOH A 201 701 433 HOH HOH . D 4 HOH A 202 702 487 HOH HOH . D 4 HOH A 203 703 597 HOH HOH . D 4 HOH A 204 704 529 HOH HOH . D 4 HOH A 205 705 565 HOH HOH . D 4 HOH A 206 706 630 HOH HOH . D 4 HOH A 207 707 579 HOH HOH . D 4 HOH A 208 708 541 HOH HOH . D 4 HOH A 209 709 453 HOH HOH . D 4 HOH A 210 710 574 HOH HOH . D 4 HOH A 211 711 674 HOH HOH . D 4 HOH A 212 712 694 HOH HOH . D 4 HOH A 213 713 650 HOH HOH . D 4 HOH A 214 714 661 HOH HOH . D 4 HOH A 215 715 670 HOH HOH . D 4 HOH A 216 716 595 HOH HOH . D 4 HOH A 217 717 649 HOH HOH . D 4 HOH A 218 718 512 HOH HOH . D 4 HOH A 219 719 651 HOH HOH . D 4 HOH A 220 720 525 HOH HOH . D 4 HOH A 221 721 663 HOH HOH . D 4 HOH A 222 722 655 HOH HOH . D 4 HOH A 223 723 471 HOH HOH . D 4 HOH A 224 724 652 HOH HOH . D 4 HOH A 225 725 608 HOH HOH . D 4 HOH A 226 726 639 HOH HOH . D 4 HOH A 227 727 606 HOH HOH . D 4 HOH A 228 728 686 HOH HOH . D 4 HOH A 229 729 548 HOH HOH . D 4 HOH A 230 730 518 HOH HOH . D 4 HOH A 231 731 681 HOH HOH . D 4 HOH A 232 732 671 HOH HOH . D 4 HOH A 233 733 645 HOH HOH . D 4 HOH A 234 734 642 HOH HOH . D 4 HOH A 235 735 682 HOH HOH . D 4 HOH A 236 736 473 HOH HOH . D 4 HOH A 237 737 596 HOH HOH . D 4 HOH A 238 738 462 HOH HOH . D 4 HOH A 239 739 578 HOH HOH . D 4 HOH A 240 740 667 HOH HOH . D 4 HOH A 241 741 644 HOH HOH . D 4 HOH A 242 742 680 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 -44.112 -1.229 -4.889 1 55.42 ? C TRS 401 A 1 HETATM 2 C C1 TRS . . . B 2 -44.967 -0.7 -3.723 1 59.2 ? C1 TRS 401 A 1 HETATM 3 C C2 TRS . . . B 2 -44.897 -1.431 -6.195 1 56.62 ? C2 TRS 401 A 1 HETATM 4 C C3 TRS . . . B 2 -43.478 -2.54 -4.5 1 40.86 ? C3 TRS 401 A 1 HETATM 5 N N TRS . . . B 2 -42.971 -0.257 -5.144 1 51.12 ? N TRS 401 A 1 HETATM 6 O O1 TRS . . . B 2 -44.839 0.724 -3.561 1 56.87 ? O1 TRS 401 A 1 HETATM 7 O O2 TRS . . . B 2 -46.213 -0.907 -6.15 1 75.24 ? O2 TRS 401 A 1 HETATM 8 O O3 TRS . . . B 2 -42.667 -2.432 -3.3 1 36.04 ? O3 TRS 401 A 1 HETATM 9 H H11 TRS . . . B 2 -44.681 -1.139 -2.895 1 57.48 ? H11 TRS 401 A 1 HETATM 10 H H12 TRS . . . B 2 -45.905 -0.928 -3.874 1 57.72 ? H12 TRS 401 A 1 HETATM 11 H H21 TRS . . . B 2 -44.938 -2.386 -6.402 1 60.14 ? H21 TRS 401 A 1 HETATM 12 H H22 TRS . . . B 2 -44.414 -0.986 -6.92 1 60.25 ? H22 TRS 401 A 1 HETATM 13 H H31 TRS . . . B 2 -42.921 -2.857 -5.241 1 42.71 ? H31 TRS 401 A 1 HETATM 14 H H32 TRS . . . B 2 -44.185 -3.201 -4.351 1 42.7 ? H32 TRS 401 A 1 HETATM 15 H HN1 TRS . . . B 2 -42.2 -0.699 -5.34 1 52.32 ? HN1 TRS 401 A 1 HETATM 16 H HN2 TRS . . . B 2 -42.822 0.258 -4.409 1 52.38 ? HN2 TRS 401 A 1 HETATM 17 H HN3 TRS . . . B 2 -43.159 0.298 -5.838 1 52.48 ? HN3 TRS 401 A 1 HETATM 18 H HO1 TRS . . . B 2 -45.29 1.142 -2.813 1 37.68 ? HO1 TRS 401 A 1 HETATM 19 H HO2 TRS . . . B 2 -46.622 -0.212 -6.54 1 43.54 ? HO2 TRS 401 A 1 HETATM 20 H HO3 TRS . . . B 2 -42.315 -1.664 -3.258 1 37.76 ? HO3 TRS 401 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #