data_7GSF # _model_server_result.job_id pr0kdlBBFrXwW3YKBmdJVQ _model_server_result.datetime_utc '2024-11-22 06:37:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gsf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7GSF # _exptl.entry_id 7GSF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 249.332 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ethyl-~{N}-[(1-methylpyrazol-4-yl)methyl]thiophene-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GSF _cell.length_a 90.005 _cell.length_b 90.005 _cell.length_c 106.457 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GSF _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H15 N3 O S' _chem_comp.formula_weight 249.332 _chem_comp.id B0Y _chem_comp.mon_nstd_flag . _chem_comp.name 5-ethyl-~{N}-[(1-methylpyrazol-4-yl)methyl]thiophene-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 B0Y sing 70 n n C2 C3 B0Y sing 71 n n C3 S1 B0Y sing 72 n y C3 C4 B0Y doub 73 n y S1 C6 B0Y sing 74 n y C4 C5 B0Y sing 75 n y C5 C6 B0Y doub 76 n y C6 C7 B0Y sing 77 n n C7 O1 B0Y doub 78 n n C7 N1 B0Y sing 79 n n N1 C8 B0Y sing 80 n n C8 C9 B0Y sing 81 n n C9 C11 B0Y doub 82 n y C9 C10 B0Y sing 83 n y C11 N3 B0Y sing 84 n y C10 N2 B0Y doub 85 n y N3 N2 B0Y sing 86 n y N3 C12 B0Y sing 87 n n N1 H1 B0Y sing 88 n n C4 H2 B0Y sing 89 n n C5 H3 B0Y sing 90 n n C8 H4 B0Y sing 91 n n C8 H5 B0Y sing 92 n n C10 H6 B0Y sing 93 n n C1 H7 B0Y sing 94 n n C1 H8 B0Y sing 95 n n C1 H9 B0Y sing 96 n n C2 H10 B0Y sing 97 n n C2 H11 B0Y sing 98 n n C11 H12 B0Y sing 99 n n C12 H13 B0Y sing 100 n n C12 H14 B0Y sing 101 n n C12 H15 B0Y sing 102 n n # _atom_sites.entry_id 7GSF _atom_sites.fract_transf_matrix[1][1] 0.01111 _atom_sites.fract_transf_matrix[1][2] 0.006415 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012829 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009393 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 401 500 TRS TRS . C 3 B0Y A 1 402 301 B0Y LIG . D 4 HOH A 1 501 692 HOH HOH . D 4 HOH A 2 502 576 HOH HOH . D 4 HOH A 3 503 696 HOH HOH . D 4 HOH A 4 504 678 HOH HOH . D 4 HOH A 5 505 621 HOH HOH . D 4 HOH A 6 506 673 HOH HOH . D 4 HOH A 7 507 685 HOH HOH . D 4 HOH A 8 508 589 HOH HOH . D 4 HOH A 9 509 524 HOH HOH . D 4 HOH A 10 510 482 HOH HOH . D 4 HOH A 11 511 470 HOH HOH . D 4 HOH A 12 512 569 HOH HOH . D 4 HOH A 13 513 419 HOH HOH . D 4 HOH A 14 514 654 HOH HOH . D 4 HOH A 15 515 464 HOH HOH . D 4 HOH A 16 516 491 HOH HOH . D 4 HOH A 17 517 517 HOH HOH . D 4 HOH A 18 518 689 HOH HOH . D 4 HOH A 19 519 421 HOH HOH . D 4 HOH A 20 520 423 HOH HOH . D 4 HOH A 21 521 704 HOH HOH . D 4 HOH A 22 522 520 HOH HOH . D 4 HOH A 23 523 695 HOH HOH . D 4 HOH A 24 524 448 HOH HOH . D 4 HOH A 25 525 452 HOH HOH . D 4 HOH A 26 526 628 HOH HOH . D 4 HOH A 27 527 688 HOH HOH . D 4 HOH A 28 528 436 HOH HOH . D 4 HOH A 29 529 611 HOH HOH . D 4 HOH A 30 530 538 HOH HOH . D 4 HOH A 31 531 577 HOH HOH . D 4 HOH A 32 532 450 HOH HOH . D 4 HOH A 33 533 664 HOH HOH . D 4 HOH A 34 534 504 HOH HOH . D 4 HOH A 35 535 414 HOH HOH . D 4 HOH A 36 536 461 HOH HOH . D 4 HOH A 37 537 693 HOH HOH . D 4 HOH A 38 538 698 HOH HOH . D 4 HOH A 39 539 677 HOH HOH . D 4 HOH A 40 540 638 HOH HOH . D 4 HOH A 41 541 427 HOH HOH . D 4 HOH A 42 542 683 HOH HOH . D 4 HOH A 43 543 627 HOH HOH . D 4 HOH A 44 544 658 HOH HOH . D 4 HOH A 45 545 540 HOH HOH . D 4 HOH A 46 546 467 HOH HOH . D 4 HOH A 47 547 446 HOH HOH . D 4 HOH A 48 548 580 HOH HOH . D 4 HOH A 49 549 631 HOH HOH . D 4 HOH A 50 550 407 HOH HOH . D 4 HOH A 51 551 497 HOH HOH . D 4 HOH A 52 552 413 HOH HOH . D 4 HOH A 53 553 449 HOH HOH . D 4 HOH A 54 554 605 HOH HOH . D 4 HOH A 55 555 405 HOH HOH . D 4 HOH A 56 556 493 HOH HOH . D 4 HOH A 57 557 429 HOH HOH . D 4 HOH A 58 558 575 HOH HOH . D 4 HOH A 59 559 536 HOH HOH . D 4 HOH A 60 560 404 HOH HOH . D 4 HOH A 61 561 409 HOH HOH . D 4 HOH A 62 562 666 HOH HOH . D 4 HOH A 63 563 443 HOH HOH . D 4 HOH A 64 564 465 HOH HOH . D 4 HOH A 65 565 479 HOH HOH . D 4 HOH A 66 566 619 HOH HOH . D 4 HOH A 67 567 415 HOH HOH . D 4 HOH A 68 568 507 HOH HOH . D 4 HOH A 69 569 501 HOH HOH . D 4 HOH A 70 570 539 HOH HOH . D 4 HOH A 71 571 411 HOH HOH . D 4 HOH A 72 572 590 HOH HOH . D 4 HOH A 73 573 522 HOH HOH . D 4 HOH A 74 574 481 HOH HOH . D 4 HOH A 75 575 406 HOH HOH . D 4 HOH A 76 576 408 HOH HOH . D 4 HOH A 77 577 668 HOH HOH . D 4 HOH A 78 578 410 HOH HOH . D 4 HOH A 79 579 402 HOH HOH . D 4 HOH A 80 580 519 HOH HOH . D 4 HOH A 81 581 549 HOH HOH . D 4 HOH A 82 582 430 HOH HOH . D 4 HOH A 83 583 440 HOH HOH . D 4 HOH A 84 584 466 HOH HOH . D 4 HOH A 85 585 528 HOH HOH . D 4 HOH A 86 586 412 HOH HOH . D 4 HOH A 87 587 587 HOH HOH . D 4 HOH A 88 588 636 HOH HOH . D 4 HOH A 89 589 417 HOH HOH . D 4 HOH A 90 590 437 HOH HOH . D 4 HOH A 91 591 581 HOH HOH . D 4 HOH A 92 592 474 HOH HOH . D 4 HOH A 93 593 635 HOH HOH . D 4 HOH A 94 594 533 HOH HOH . D 4 HOH A 95 595 625 HOH HOH . D 4 HOH A 96 596 552 HOH HOH . D 4 HOH A 97 597 441 HOH HOH . D 4 HOH A 98 598 509 HOH HOH . D 4 HOH A 99 599 431 HOH HOH . D 4 HOH A 100 600 426 HOH HOH . D 4 HOH A 101 601 460 HOH HOH . D 4 HOH A 102 602 447 HOH HOH . D 4 HOH A 103 603 444 HOH HOH . D 4 HOH A 104 604 660 HOH HOH . D 4 HOH A 105 605 503 HOH HOH . D 4 HOH A 106 606 468 HOH HOH . D 4 HOH A 107 607 496 HOH HOH . D 4 HOH A 108 608 486 HOH HOH . D 4 HOH A 109 609 700 HOH HOH . D 4 HOH A 110 610 594 HOH HOH . D 4 HOH A 111 611 455 HOH HOH . D 4 HOH A 112 612 435 HOH HOH . D 4 HOH A 113 613 672 HOH HOH . D 4 HOH A 114 614 556 HOH HOH . D 4 HOH A 115 615 463 HOH HOH . D 4 HOH A 116 616 451 HOH HOH . D 4 HOH A 117 617 669 HOH HOH . D 4 HOH A 118 618 459 HOH HOH . D 4 HOH A 119 619 424 HOH HOH . D 4 HOH A 120 620 416 HOH HOH . D 4 HOH A 121 621 484 HOH HOH . D 4 HOH A 122 622 559 HOH HOH . D 4 HOH A 123 623 527 HOH HOH . D 4 HOH A 124 624 403 HOH HOH . D 4 HOH A 125 625 505 HOH HOH . D 4 HOH A 126 626 420 HOH HOH . D 4 HOH A 127 627 489 HOH HOH . D 4 HOH A 128 628 676 HOH HOH . D 4 HOH A 129 629 418 HOH HOH . D 4 HOH A 130 630 521 HOH HOH . D 4 HOH A 131 631 543 HOH HOH . D 4 HOH A 132 632 475 HOH HOH . D 4 HOH A 133 633 561 HOH HOH . D 4 HOH A 134 634 438 HOH HOH . D 4 HOH A 135 635 513 HOH HOH . D 4 HOH A 136 636 675 HOH HOH . D 4 HOH A 137 637 530 HOH HOH . D 4 HOH A 138 638 699 HOH HOH . D 4 HOH A 139 639 618 HOH HOH . D 4 HOH A 140 640 566 HOH HOH . D 4 HOH A 141 641 563 HOH HOH . D 4 HOH A 142 642 442 HOH HOH . D 4 HOH A 143 643 488 HOH HOH . D 4 HOH A 144 644 439 HOH HOH . D 4 HOH A 145 645 546 HOH HOH . D 4 HOH A 146 646 535 HOH HOH . D 4 HOH A 147 647 526 HOH HOH . D 4 HOH A 148 648 422 HOH HOH . D 4 HOH A 149 649 702 HOH HOH . D 4 HOH A 150 650 562 HOH HOH . D 4 HOH A 151 651 657 HOH HOH . D 4 HOH A 152 652 553 HOH HOH . D 4 HOH A 153 653 653 HOH HOH . D 4 HOH A 154 654 602 HOH HOH . D 4 HOH A 155 655 477 HOH HOH . D 4 HOH A 156 656 492 HOH HOH . D 4 HOH A 157 657 457 HOH HOH . D 4 HOH A 158 658 458 HOH HOH . D 4 HOH A 159 659 684 HOH HOH . D 4 HOH A 160 660 554 HOH HOH . D 4 HOH A 161 661 454 HOH HOH . D 4 HOH A 162 662 456 HOH HOH . D 4 HOH A 163 663 697 HOH HOH . D 4 HOH A 164 664 476 HOH HOH . D 4 HOH A 165 665 472 HOH HOH . D 4 HOH A 166 666 648 HOH HOH . D 4 HOH A 167 667 432 HOH HOH . D 4 HOH A 168 668 478 HOH HOH . D 4 HOH A 169 669 498 HOH HOH . D 4 HOH A 170 670 624 HOH HOH . D 4 HOH A 171 671 690 HOH HOH . D 4 HOH A 172 672 551 HOH HOH . D 4 HOH A 173 673 616 HOH HOH . D 4 HOH A 174 674 506 HOH HOH . D 4 HOH A 175 675 514 HOH HOH . D 4 HOH A 176 676 510 HOH HOH . D 4 HOH A 177 677 490 HOH HOH . D 4 HOH A 178 678 662 HOH HOH . D 4 HOH A 179 679 469 HOH HOH . D 4 HOH A 180 680 687 HOH HOH . D 4 HOH A 181 681 665 HOH HOH . D 4 HOH A 182 682 560 HOH HOH . D 4 HOH A 183 683 637 HOH HOH . D 4 HOH A 184 684 523 HOH HOH . D 4 HOH A 185 685 565 HOH HOH . D 4 HOH A 186 686 555 HOH HOH . D 4 HOH A 187 687 567 HOH HOH . D 4 HOH A 188 688 661 HOH HOH . D 4 HOH A 189 689 647 HOH HOH . D 4 HOH A 190 690 542 HOH HOH . D 4 HOH A 191 691 656 HOH HOH . D 4 HOH A 192 692 703 HOH HOH . D 4 HOH A 193 693 598 HOH HOH . D 4 HOH A 194 694 597 HOH HOH . D 4 HOH A 195 695 502 HOH HOH . D 4 HOH A 196 696 462 HOH HOH . D 4 HOH A 197 697 701 HOH HOH . D 4 HOH A 198 698 453 HOH HOH . D 4 HOH A 199 699 659 HOH HOH . D 4 HOH A 200 700 694 HOH HOH . D 4 HOH A 201 701 529 HOH HOH . D 4 HOH A 202 702 541 HOH HOH . D 4 HOH A 203 703 483 HOH HOH . D 4 HOH A 204 704 433 HOH HOH . D 4 HOH A 205 705 487 HOH HOH . D 4 HOH A 206 706 614 HOH HOH . D 4 HOH A 207 707 574 HOH HOH . D 4 HOH A 208 708 595 HOH HOH . D 4 HOH A 209 709 646 HOH HOH . D 4 HOH A 210 710 579 HOH HOH . D 4 HOH A 211 711 617 HOH HOH . D 4 HOH A 212 712 674 HOH HOH . D 4 HOH A 213 713 630 HOH HOH . D 4 HOH A 214 714 679 HOH HOH . D 4 HOH A 215 715 670 HOH HOH . D 4 HOH A 216 716 663 HOH HOH . D 4 HOH A 217 717 650 HOH HOH . D 4 HOH A 218 718 471 HOH HOH . D 4 HOH A 219 719 655 HOH HOH . D 4 HOH A 220 720 651 HOH HOH . D 4 HOH A 221 721 649 HOH HOH . D 4 HOH A 222 722 512 HOH HOH . D 4 HOH A 223 723 525 HOH HOH . D 4 HOH A 224 724 639 HOH HOH . D 4 HOH A 225 725 681 HOH HOH . D 4 HOH A 226 726 606 HOH HOH . D 4 HOH A 227 727 608 HOH HOH . D 4 HOH A 228 728 671 HOH HOH . D 4 HOH A 229 729 686 HOH HOH . D 4 HOH A 230 730 518 HOH HOH . D 4 HOH A 231 731 645 HOH HOH . D 4 HOH A 232 732 548 HOH HOH . D 4 HOH A 233 733 682 HOH HOH . D 4 HOH A 234 734 473 HOH HOH . D 4 HOH A 235 735 680 HOH HOH . D 4 HOH A 236 736 667 HOH HOH . D 4 HOH A 237 737 596 HOH HOH . D 4 HOH A 238 738 578 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 B0Y . . . C 3 42.485 -15.978 -23.14 0.43 46.54 ? N1 B0Y 402 A 1 HETATM 2 N N3 B0Y . . . C 3 43.897 -16.708 -27.162 0.43 55.2 ? N3 B0Y 402 A 1 HETATM 3 C C4 B0Y . . . C 3 44.637 -12.956 -20.329 0.43 50.92 ? C4 B0Y 402 A 1 HETATM 4 C C5 B0Y . . . C 3 44.006 -14.135 -20.948 0.43 50.77 ? C5 B0Y 402 A 1 HETATM 5 C C6 B0Y . . . C 3 42.797 -13.913 -21.581 0.43 51.56 ? C6 B0Y 402 A 1 HETATM 6 C C7 B0Y . . . C 3 41.89 -14.956 -22.291 0.43 49.44 ? C7 B0Y 402 A 1 HETATM 7 C C8 B0Y . . . C 3 43.926 -16.184 -23.451 0.43 43.58 ? C8 B0Y 402 A 1 HETATM 8 C C10 B0Y . . . C 3 45.415 -16.376 -25.628 0.43 50.45 ? C10 B0Y 402 A 1 HETATM 9 C C1 B0Y . . . C 3 43.162 -9.573 -19.36 0.43 53.43 ? C1 B0Y 402 A 1 HETATM 10 C C2 B0Y . . . C 3 44.32 -10.408 -19.931 0.43 54.15 ? C2 B0Y 402 A 1 HETATM 11 C C3 B0Y . . . C 3 43.965 -11.798 -20.449 0.43 51.95 ? C3 B0Y 402 A 1 HETATM 12 S S1 B0Y . . . C 3 42.5 -12.179 -21.346 0.43 58.64 ? S1 B0Y 402 A 1 HETATM 13 O O1 B0Y . . . C 3 40.73 -14.948 -22.172 0.43 47.72 ? O1 B0Y 402 A 1 HETATM 14 C C9 B0Y . . . C 3 44.173 -16.375 -24.927 0.43 46.63 ? C9 B0Y 402 A 1 HETATM 15 N N2 B0Y . . . C 3 45.261 -16.579 -26.97 0.43 52.75 ? N2 B0Y 402 A 1 HETATM 16 C C11 B0Y . . . C 3 43.258 -16.582 -25.955 0.43 50.93 ? C11 B0Y 402 A 1 HETATM 17 C C12 B0Y . . . C 3 43.273 -16.941 -28.518 0.43 59.21 ? C12 B0Y 402 A 1 HETATM 18 H H1 B0Y . . . C 3 41.916 -16.644 -23.593 0.43 46.58 ? H1 B0Y 402 A 1 HETATM 19 H H2 B0Y . . . C 3 45.614 -13.072 -19.813 0.43 51.23 ? H2 B0Y 402 A 1 HETATM 20 H H3 B0Y . . . C 3 44.554 -15.076 -20.848 0.43 51.07 ? H3 B0Y 402 A 1 HETATM 21 H H4 B0Y . . . C 3 44.231 -17.121 -22.928 0.43 44.99 ? H4 B0Y 402 A 1 HETATM 22 H H5 B0Y . . . C 3 44.569 -15.423 -23.012 0.43 45.02 ? H5 B0Y 402 A 1 HETATM 23 H H6 B0Y . . . C 3 46.408 -16.241 -25.162 0.43 50.14 ? H6 B0Y 402 A 1 HETATM 24 H H7 B0Y . . . C 3 43.44 -8.651 -18.799 0.43 53.66 ? H7 B0Y 402 A 1 HETATM 25 H H8 B0Y . . . C 3 42.566 -10.169 -18.656 0.43 53.66 ? H8 B0Y 402 A 1 HETATM 26 H H9 B0Y . . . C 3 42.433 -9.301 -20.127 0.43 53.66 ? H9 B0Y 402 A 1 HETATM 27 H H10 B0Y . . . C 3 45.106 -10.425 -19.159 0.43 53.47 ? H10 B0Y 402 A 1 HETATM 28 H H11 B0Y . . . C 3 44.77 -9.817 -20.754 0.43 53.47 ? H11 B0Y 402 A 1 HETATM 29 H H12 B0Y . . . C 3 42.152 -16.658 -25.91 0.43 50.84 ? H12 B0Y 402 A 1 HETATM 30 H H13 B0Y . . . C 3 42.172 -17.08 -28.5 0.43 57.96 ? H13 B0Y 402 A 1 HETATM 31 H H14 B0Y . . . C 3 43.644 -17.849 -29.031 0.43 57.96 ? H14 B0Y 402 A 1 HETATM 32 H H15 B0Y . . . C 3 43.442 -16.151 -29.267 0.43 57.96 ? H15 B0Y 402 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #