data_7GSH # _model_server_result.job_id u4nWaGpy9UANTcShTBcllg _model_server_result.datetime_utc '2024-11-13 07:21:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gsh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7GSH # _exptl.entry_id 7GSH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 233.306 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(4-methylphenyl)-N-{[(2S)-oxolan-2-yl]methyl}acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GSH _cell.length_a 90.542 _cell.length_b 90.542 _cell.length_c 107.177 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GSH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H19 N O2' _chem_comp.formula_weight 233.306 _chem_comp.id WLY _chem_comp.mon_nstd_flag . _chem_comp.name 2-(4-methylphenyl)-N-{[(2S)-oxolan-2-yl]methyl}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 WLY sing 395 n n C02 C17 WLY doub 396 n y C02 C03 WLY sing 397 n y C17 C16 WLY sing 398 n y O15 C14 WLY sing 399 n n O15 C11 WLY sing 400 n n C14 C13 WLY sing 401 n n C03 C04 WLY doub 402 n y C16 C05 WLY doub 403 n y C13 C12 WLY sing 404 n n C11 C10 WLY sing 405 n n C11 C12 WLY sing 406 n n C04 C05 WLY sing 407 n y C05 C06 WLY sing 408 n n C10 N09 WLY sing 409 n n N09 C07 WLY sing 410 n n C07 C06 WLY sing 411 n n C07 O08 WLY doub 412 n n C10 H1 WLY sing 413 n n C10 H2 WLY sing 414 n n C13 H3 WLY sing 415 n n C13 H4 WLY sing 416 n n C17 H5 WLY sing 417 n n C01 H6 WLY sing 418 n n C01 H7 WLY sing 419 n n C01 H8 WLY sing 420 n n C03 H9 WLY sing 421 n n C04 H10 WLY sing 422 n n C06 H11 WLY sing 423 n n C06 H12 WLY sing 424 n n C11 H13 WLY sing 425 n n C12 H14 WLY sing 426 n n C12 H15 WLY sing 427 n n C14 H16 WLY sing 428 n n C14 H17 WLY sing 429 n n C16 H18 WLY sing 430 n n N09 H19 WLY sing 431 n n # _atom_sites.entry_id 7GSH _atom_sites.fract_transf_matrix[1][1] 0.011045 _atom_sites.fract_transf_matrix[1][2] 0.006377 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012753 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00933 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 401 500 TRS TRS . C 3 WLY A 1 402 301 WLY LIG . D 4 HOH A 1 501 692 HOH HOH . D 4 HOH A 2 502 696 HOH HOH . D 4 HOH A 3 503 621 HOH HOH . D 4 HOH A 4 504 632 HOH HOH . D 4 HOH A 5 505 678 HOH HOH . D 4 HOH A 6 506 673 HOH HOH . D 4 HOH A 7 507 464 HOH HOH . D 4 HOH A 8 508 524 HOH HOH . D 4 HOH A 9 509 634 HOH HOH . D 4 HOH A 10 510 450 HOH HOH . D 4 HOH A 11 511 482 HOH HOH . D 4 HOH A 12 512 414 HOH HOH . D 4 HOH A 13 513 693 HOH HOH . D 4 HOH A 14 514 605 HOH HOH . D 4 HOH A 15 515 589 HOH HOH . D 4 HOH A 16 516 704 HOH HOH . D 4 HOH A 17 517 470 HOH HOH . D 4 HOH A 18 518 419 HOH HOH . D 4 HOH A 19 519 688 HOH HOH . D 4 HOH A 20 520 452 HOH HOH . D 4 HOH A 21 521 517 HOH HOH . D 4 HOH A 22 522 569 HOH HOH . D 4 HOH A 23 523 628 HOH HOH . D 4 HOH A 24 524 522 HOH HOH . D 4 HOH A 25 525 423 HOH HOH . D 4 HOH A 26 526 689 HOH HOH . D 4 HOH A 27 527 497 HOH HOH . D 4 HOH A 28 528 683 HOH HOH . D 4 HOH A 29 529 421 HOH HOH . D 4 HOH A 30 530 538 HOH HOH . D 4 HOH A 31 531 556 HOH HOH . D 4 HOH A 32 532 448 HOH HOH . D 4 HOH A 33 533 695 HOH HOH . D 4 HOH A 34 534 658 HOH HOH . D 4 HOH A 35 535 590 HOH HOH . D 4 HOH A 36 536 520 HOH HOH . D 4 HOH A 37 537 466 HOH HOH . D 4 HOH A 38 538 434 HOH HOH . D 4 HOH A 39 539 666 HOH HOH . D 4 HOH A 40 540 676 HOH HOH . D 4 HOH A 41 541 408 HOH HOH . D 4 HOH A 42 542 413 HOH HOH . D 4 HOH A 43 543 699 HOH HOH . D 4 HOH A 44 544 507 HOH HOH . D 4 HOH A 45 545 429 HOH HOH . D 4 HOH A 46 546 668 HOH HOH . D 4 HOH A 47 547 627 HOH HOH . D 4 HOH A 48 548 427 HOH HOH . D 4 HOH A 49 549 665 HOH HOH . D 4 HOH A 50 550 528 HOH HOH . D 4 HOH A 51 551 460 HOH HOH . D 4 HOH A 52 552 411 HOH HOH . D 4 HOH A 53 553 407 HOH HOH . D 4 HOH A 54 554 436 HOH HOH . D 4 HOH A 55 555 409 HOH HOH . D 4 HOH A 56 556 638 HOH HOH . D 4 HOH A 57 557 594 HOH HOH . D 4 HOH A 58 558 501 HOH HOH . D 4 HOH A 59 559 426 HOH HOH . D 4 HOH A 60 560 474 HOH HOH . D 4 HOH A 61 561 616 HOH HOH . D 4 HOH A 62 562 566 HOH HOH . D 4 HOH A 63 563 504 HOH HOH . D 4 HOH A 64 564 406 HOH HOH . D 4 HOH A 65 565 602 HOH HOH . D 4 HOH A 66 566 435 HOH HOH . D 4 HOH A 67 567 405 HOH HOH . D 4 HOH A 68 568 431 HOH HOH . D 4 HOH A 69 569 412 HOH HOH . D 4 HOH A 70 570 417 HOH HOH . D 4 HOH A 71 571 631 HOH HOH . D 4 HOH A 72 572 468 HOH HOH . D 4 HOH A 73 573 402 HOH HOH . D 4 HOH A 74 574 446 HOH HOH . D 4 HOH A 75 575 491 HOH HOH . D 4 HOH A 76 576 664 HOH HOH . D 4 HOH A 77 577 465 HOH HOH . D 4 HOH A 78 578 587 HOH HOH . D 4 HOH A 79 579 625 HOH HOH . D 4 HOH A 80 580 684 HOH HOH . D 4 HOH A 81 581 611 HOH HOH . D 4 HOH A 82 582 493 HOH HOH . D 4 HOH A 83 583 672 HOH HOH . D 4 HOH A 84 584 437 HOH HOH . D 4 HOH A 85 585 404 HOH HOH . D 4 HOH A 86 586 509 HOH HOH . D 4 HOH A 87 587 533 HOH HOH . D 4 HOH A 88 588 526 HOH HOH . D 4 HOH A 89 589 440 HOH HOH . D 4 HOH A 90 590 455 HOH HOH . D 4 HOH A 91 591 503 HOH HOH . D 4 HOH A 92 592 486 HOH HOH . D 4 HOH A 93 593 619 HOH HOH . D 4 HOH A 94 594 479 HOH HOH . D 4 HOH A 95 595 443 HOH HOH . D 4 HOH A 96 596 563 HOH HOH . D 4 HOH A 97 597 410 HOH HOH . D 4 HOH A 98 598 536 HOH HOH . D 4 HOH A 99 599 633 HOH HOH . D 4 HOH A 100 600 415 HOH HOH . D 4 HOH A 101 601 416 HOH HOH . D 4 HOH A 102 602 444 HOH HOH . D 4 HOH A 103 603 403 HOH HOH . D 4 HOH A 104 604 549 HOH HOH . D 4 HOH A 105 605 438 HOH HOH . D 4 HOH A 106 606 463 HOH HOH . D 4 HOH A 107 607 447 HOH HOH . D 4 HOH A 108 608 430 HOH HOH . D 4 HOH A 109 609 439 HOH HOH . D 4 HOH A 110 610 702 HOH HOH . D 4 HOH A 111 611 685 HOH HOH . D 4 HOH A 112 612 424 HOH HOH . D 4 HOH A 113 613 519 HOH HOH . D 4 HOH A 114 614 496 HOH HOH . D 4 HOH A 115 615 481 HOH HOH . D 4 HOH A 116 616 459 HOH HOH . D 4 HOH A 117 617 669 HOH HOH . D 4 HOH A 118 618 554 HOH HOH . D 4 HOH A 119 619 475 HOH HOH . D 4 HOH A 120 620 441 HOH HOH . D 4 HOH A 121 621 635 HOH HOH . D 4 HOH A 122 622 530 HOH HOH . D 4 HOH A 123 623 552 HOH HOH . D 4 HOH A 124 624 577 HOH HOH . D 4 HOH A 125 625 581 HOH HOH . D 4 HOH A 126 626 562 HOH HOH . D 4 HOH A 127 627 561 HOH HOH . D 4 HOH A 128 628 598 HOH HOH . D 4 HOH A 129 629 540 HOH HOH . D 4 HOH A 130 630 420 HOH HOH . D 4 HOH A 131 631 484 HOH HOH . D 4 HOH A 132 632 648 HOH HOH . D 4 HOH A 133 633 505 HOH HOH . D 4 HOH A 134 634 575 HOH HOH . D 4 HOH A 135 635 703 HOH HOH . D 4 HOH A 136 636 636 HOH HOH . D 4 HOH A 137 637 546 HOH HOH . D 4 HOH A 138 638 700 HOH HOH . D 4 HOH A 139 639 559 HOH HOH . D 4 HOH A 140 640 422 HOH HOH . D 4 HOH A 141 641 418 HOH HOH . D 4 HOH A 142 642 457 HOH HOH . D 4 HOH A 143 643 660 HOH HOH . D 4 HOH A 144 644 454 HOH HOH . D 4 HOH A 145 645 553 HOH HOH . D 4 HOH A 146 646 677 HOH HOH . D 4 HOH A 147 647 527 HOH HOH . D 4 HOH A 148 648 458 HOH HOH . D 4 HOH A 149 649 476 HOH HOH . D 4 HOH A 150 650 451 HOH HOH . D 4 HOH A 151 651 492 HOH HOH . D 4 HOH A 152 652 461 HOH HOH . D 4 HOH A 153 653 489 HOH HOH . D 4 HOH A 154 654 539 HOH HOH . D 4 HOH A 155 655 521 HOH HOH . D 4 HOH A 156 656 432 HOH HOH . D 4 HOH A 157 657 456 HOH HOH . D 4 HOH A 158 658 442 HOH HOH . D 4 HOH A 159 659 543 HOH HOH . D 4 HOH A 160 660 675 HOH HOH . D 4 HOH A 161 661 502 HOH HOH . D 4 HOH A 162 662 477 HOH HOH . D 4 HOH A 163 663 551 HOH HOH . D 4 HOH A 164 664 472 HOH HOH . D 4 HOH A 165 665 624 HOH HOH . D 4 HOH A 166 666 506 HOH HOH . D 4 HOH A 167 667 555 HOH HOH . D 4 HOH A 168 668 488 HOH HOH . D 4 HOH A 169 669 478 HOH HOH . D 4 HOH A 170 670 657 HOH HOH . D 4 HOH A 171 671 514 HOH HOH . D 4 HOH A 172 672 646 HOH HOH . D 4 HOH A 173 673 535 HOH HOH . D 4 HOH A 174 674 469 HOH HOH . D 4 HOH A 175 675 523 HOH HOH . D 4 HOH A 176 676 453 HOH HOH . D 4 HOH A 177 677 560 HOH HOH . D 4 HOH A 178 678 659 HOH HOH . D 4 HOH A 179 679 637 HOH HOH . D 4 HOH A 180 680 653 HOH HOH . D 4 HOH A 181 681 510 HOH HOH . D 4 HOH A 182 682 614 HOH HOH . D 4 HOH A 183 683 652 HOH HOH . D 4 HOH A 184 684 490 HOH HOH . D 4 HOH A 185 685 687 HOH HOH . D 4 HOH A 186 686 679 HOH HOH . D 4 HOH A 187 687 662 HOH HOH . D 4 HOH A 188 688 542 HOH HOH . D 4 HOH A 189 689 701 HOH HOH . D 4 HOH A 190 690 654 HOH HOH . D 4 HOH A 191 691 694 HOH HOH . D 4 HOH A 192 692 529 HOH HOH . D 4 HOH A 193 693 661 HOH HOH . D 4 HOH A 194 694 433 HOH HOH . D 4 HOH A 195 695 487 HOH HOH . D 4 HOH A 196 696 565 HOH HOH . D 4 HOH A 197 697 483 HOH HOH . D 4 HOH A 198 698 597 HOH HOH . D 4 HOH A 199 699 630 HOH HOH . D 4 HOH A 200 700 674 HOH HOH . D 4 HOH A 201 701 656 HOH HOH . D 4 HOH A 202 702 541 HOH HOH . D 4 HOH A 203 703 579 HOH HOH . D 4 HOH A 204 704 574 HOH HOH . D 4 HOH A 205 705 639 HOH HOH . D 4 HOH A 206 706 617 HOH HOH . D 4 HOH A 207 707 462 HOH HOH . D 4 HOH A 208 708 670 HOH HOH . D 4 HOH A 209 709 595 HOH HOH . D 4 HOH A 210 710 663 HOH HOH . D 4 HOH A 211 711 608 HOH HOH . D 4 HOH A 212 712 525 HOH HOH . D 4 HOH A 213 713 655 HOH HOH . D 4 HOH A 214 714 471 HOH HOH . D 4 HOH A 215 715 690 HOH HOH . D 4 HOH A 216 716 512 HOH HOH . D 4 HOH A 217 717 606 HOH HOH . D 4 HOH A 218 718 642 HOH HOH . D 4 HOH A 219 719 650 HOH HOH . D 4 HOH A 220 720 686 HOH HOH . D 4 HOH A 221 721 681 HOH HOH . D 4 HOH A 222 722 671 HOH HOH . D 4 HOH A 223 723 548 HOH HOH . D 4 HOH A 224 724 596 HOH HOH . D 4 HOH A 225 725 682 HOH HOH . D 4 HOH A 226 726 473 HOH HOH . D 4 HOH A 227 727 667 HOH HOH . D 4 HOH A 228 728 645 HOH HOH . D 4 HOH A 229 729 578 HOH HOH . D 4 HOH A 230 730 680 HOH HOH . D 4 HOH A 231 731 644 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WLY . . . C 3 -54.69 49.911 -7.76 0.38 48.63 ? C10 WLY 402 A 1 HETATM 2 C C13 WLY . . . C 3 -57.633 49.772 -10.236 0.38 45.86 ? C13 WLY 402 A 1 HETATM 3 C C17 WLY . . . C 3 -48.916 46.558 -5.9 0.38 46.05 ? C17 WLY 402 A 1 HETATM 4 C C01 WLY . . . C 3 -48.323 44.307 -4.904 0.38 45.46 ? C01 WLY 402 A 1 HETATM 5 C C02 WLY . . . C 3 -49.109 45.179 -5.842 0.38 46.76 ? C02 WLY 402 A 1 HETATM 6 C C03 WLY . . . C 3 -50.072 44.649 -6.7 0.38 46.03 ? C03 WLY 402 A 1 HETATM 7 C C04 WLY . . . C 3 -50.807 45.479 -7.565 0.38 45.83 ? C04 WLY 402 A 1 HETATM 8 C C05 WLY . . . C 3 -50.623 46.86 -7.63 0.38 45.89 ? C05 WLY 402 A 1 HETATM 9 C C06 WLY . . . C 3 -51.403 47.77 -8.577 0.38 47.95 ? C06 WLY 402 A 1 HETATM 10 C C07 WLY . . . C 3 -52.888 48.128 -8.196 0.38 47.88 ? C07 WLY 402 A 1 HETATM 11 C C11 WLY . . . C 3 -55.642 50.426 -8.919 0.38 47.73 ? C11 WLY 402 A 1 HETATM 12 C C12 WLY . . . C 3 -57.128 49.948 -8.797 0.38 47.57 ? C12 WLY 402 A 1 HETATM 13 C C14 WLY . . . C 3 -56.376 50.1 -11.062 0.38 46.59 ? C14 WLY 402 A 1 HETATM 14 C C16 WLY . . . C 3 -49.654 47.374 -6.772 0.38 46.66 ? C16 WLY 402 A 1 HETATM 15 N N09 WLY . . . C 3 -53.288 49.501 -8.123 0.38 47.86 ? N09 WLY 402 A 1 HETATM 16 O O08 WLY . . . C 3 -53.666 47.241 -7.989 0.38 46.68 ? O08 WLY 402 A 1 HETATM 17 O O15 WLY . . . C 3 -55.266 49.951 -10.202 0.38 45.48 ? O15 WLY 402 A 1 HETATM 18 H H1 WLY . . . C 3 -54.595 50.768 -7.051 0.38 48.25 ? H1 WLY 402 A 1 HETATM 19 H H2 WLY . . . C 3 -55.212 49.116 -7.182 0.38 48.25 ? H2 WLY 402 A 1 HETATM 20 H H3 WLY . . . C 3 -58.495 50.421 -10.505 0.38 46.44 ? H3 WLY 402 A 1 HETATM 21 H H4 WLY . . . C 3 -58.015 48.756 -10.455 0.38 46.44 ? H4 WLY 402 A 1 HETATM 22 H H5 WLY . . . C 3 -48.168 47.021 -5.245 0.38 46.35 ? H5 WLY 402 A 1 HETATM 23 H H6 WLY . . . C 3 -47.708 44.861 -4.18 0.38 45.83 ? H6 WLY 402 A 1 HETATM 24 H H7 WLY . . . C 3 -47.62 43.629 -5.414 0.38 45.85 ? H7 WLY 402 A 1 HETATM 25 H H8 WLY . . . C 3 -48.953 43.646 -4.286 0.38 45.85 ? H8 WLY 402 A 1 HETATM 26 H H9 WLY . . . C 3 -50.257 43.568 -6.681 0.38 46.18 ? H9 WLY 402 A 1 HETATM 27 H H10 WLY . . . C 3 -51.545 44.977 -8.206 0.38 45.95 ? H10 WLY 402 A 1 HETATM 28 H H11 WLY . . . C 3 -51.318 47.385 -9.615 0.38 47.45 ? H11 WLY 402 A 1 HETATM 29 H H12 WLY . . . C 3 -50.87 48.747 -8.64 0.38 47.45 ? H12 WLY 402 A 1 HETATM 30 H H13 WLY . . . C 3 -55.619 51.545 -8.955 0.38 47.44 ? H13 WLY 402 A 1 HETATM 31 H H14 WLY . . . C 3 -57.26 49.013 -8.22 0.38 47.21 ? H14 WLY 402 A 1 HETATM 32 H H15 WLY . . . C 3 -57.752 50.698 -8.27 0.38 47.21 ? H15 WLY 402 A 1 HETATM 33 H H16 WLY . . . C 3 -56.38 51.132 -11.466 0.38 46.19 ? H16 WLY 402 A 1 HETATM 34 H H17 WLY . . . C 3 -56.314 49.429 -11.952 0.38 46.17 ? H17 WLY 402 A 1 HETATM 35 H H18 WLY . . . C 3 -49.451 48.447 -6.768 0.38 46.34 ? H18 WLY 402 A 1 HETATM 36 H H19 WLY . . . C 3 -52.641 50.246 -8.296 0.38 48.04 ? H19 WLY 402 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 36 #