data_7GSL # _model_server_result.job_id gyvX0_oxKrdIuRDZcqTMpQ _model_server_result.datetime_utc '2024-11-22 05:58:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gsl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7GSL # _exptl.entry_id 7GSL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 168.216 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(methylsulfanyl)pyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GSL _cell.length_a 89.944 _cell.length_b 89.944 _cell.length_c 106.588 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GSL _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H8 N2 O S' _chem_comp.formula_weight 168.216 _chem_comp.id A1AA8 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(methylsulfanyl)pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N11 C09 A1AA8 sing 1 n n S02 C03 A1AA8 sing 2 n n S02 C01 A1AA8 sing 3 n n C09 C08 A1AA8 sing 4 n n C09 O10 A1AA8 doub 5 n n C03 C08 A1AA8 doub 6 n y C03 N04 A1AA8 sing 7 n y C08 C07 A1AA8 sing 8 n y N04 C05 A1AA8 doub 9 n y C07 C06 A1AA8 doub 10 n y C05 C06 A1AA8 sing 11 n y C01 H011 A1AA8 sing 12 n n C01 H012 A1AA8 sing 13 n n C01 H013 A1AA8 sing 14 n n C05 H051 A1AA8 sing 15 n n C06 H061 A1AA8 sing 16 n n C07 H071 A1AA8 sing 17 n n N11 H111 A1AA8 sing 18 n n N11 H112 A1AA8 sing 19 n n # _atom_sites.entry_id 7GSL _atom_sites.fract_transf_matrix[1][1] 0.011118 _atom_sites.fract_transf_matrix[1][2] 0.006419 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012838 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 401 500 TRS TRS . C 3 A1AA8 A 1 402 301 A1AA8 LIG . D 4 HOH A 1 501 692 HOH HOH . D 4 HOH A 2 502 696 HOH HOH . D 4 HOH A 3 503 678 HOH HOH . D 4 HOH A 4 504 589 HOH HOH . D 4 HOH A 5 505 673 HOH HOH . D 4 HOH A 6 506 482 HOH HOH . D 4 HOH A 7 507 602 HOH HOH . D 4 HOH A 8 508 634 HOH HOH . D 4 HOH A 9 509 621 HOH HOH . D 4 HOH A 10 510 423 HOH HOH . D 4 HOH A 11 511 464 HOH HOH . D 4 HOH A 12 512 628 HOH HOH . D 4 HOH A 13 513 524 HOH HOH . D 4 HOH A 14 514 569 HOH HOH . D 4 HOH A 15 515 688 HOH HOH . D 4 HOH A 16 516 419 HOH HOH . D 4 HOH A 17 517 470 HOH HOH . D 4 HOH A 18 518 517 HOH HOH . D 4 HOH A 19 519 491 HOH HOH . D 4 HOH A 20 520 448 HOH HOH . D 4 HOH A 21 521 695 HOH HOH . D 4 HOH A 22 522 510 HOH HOH . D 4 HOH A 23 523 689 HOH HOH . D 4 HOH A 24 524 421 HOH HOH . D 4 HOH A 25 525 465 HOH HOH . D 4 HOH A 26 526 627 HOH HOH . D 4 HOH A 27 527 402 HOH HOH . D 4 HOH A 28 528 693 HOH HOH . D 4 HOH A 29 529 501 HOH HOH . D 4 HOH A 30 530 461 HOH HOH . D 4 HOH A 31 531 435 HOH HOH . D 4 HOH A 32 532 664 HOH HOH . D 4 HOH A 33 533 493 HOH HOH . D 4 HOH A 34 534 580 HOH HOH . D 4 HOH A 35 535 404 HOH HOH . D 4 HOH A 36 536 429 HOH HOH . D 4 HOH A 37 537 536 HOH HOH . D 4 HOH A 38 538 577 HOH HOH . D 4 HOH A 39 539 479 HOH HOH . D 4 HOH A 40 540 507 HOH HOH . D 4 HOH A 41 541 676 HOH HOH . D 4 HOH A 42 542 658 HOH HOH . D 4 HOH A 43 543 481 HOH HOH . D 4 HOH A 44 544 587 HOH HOH . D 4 HOH A 45 545 405 HOH HOH . D 4 HOH A 46 546 441 HOH HOH . D 4 HOH A 47 547 528 HOH HOH . D 4 HOH A 48 548 625 HOH HOH . D 4 HOH A 49 549 611 HOH HOH . D 4 HOH A 50 550 466 HOH HOH . D 4 HOH A 51 551 427 HOH HOH . D 4 HOH A 52 552 406 HOH HOH . D 4 HOH A 53 553 414 HOH HOH . D 4 HOH A 54 554 504 HOH HOH . D 4 HOH A 55 555 430 HOH HOH . D 4 HOH A 56 556 698 HOH HOH . D 4 HOH A 57 557 450 HOH HOH . D 4 HOH A 58 558 631 HOH HOH . D 4 HOH A 59 559 635 HOH HOH . D 4 HOH A 60 560 566 HOH HOH . D 4 HOH A 61 561 434 HOH HOH . D 4 HOH A 62 562 619 HOH HOH . D 4 HOH A 63 563 415 HOH HOH . D 4 HOH A 64 564 407 HOH HOH . D 4 HOH A 65 565 666 HOH HOH . D 4 HOH A 66 566 411 HOH HOH . D 4 HOH A 67 567 437 HOH HOH . D 4 HOH A 68 568 413 HOH HOH . D 4 HOH A 69 569 467 HOH HOH . D 4 HOH A 70 570 660 HOH HOH . D 4 HOH A 71 571 409 HOH HOH . D 4 HOH A 72 572 417 HOH HOH . D 4 HOH A 73 573 538 HOH HOH . D 4 HOH A 74 574 410 HOH HOH . D 4 HOH A 75 575 431 HOH HOH . D 4 HOH A 76 576 412 HOH HOH . D 4 HOH A 77 577 447 HOH HOH . D 4 HOH A 78 578 446 HOH HOH . D 4 HOH A 79 579 549 HOH HOH . D 4 HOH A 80 580 408 HOH HOH . D 4 HOH A 81 581 581 HOH HOH . D 4 HOH A 82 582 509 HOH HOH . D 4 HOH A 83 583 497 HOH HOH . D 4 HOH A 84 584 683 HOH HOH . D 4 HOH A 85 585 449 HOH HOH . D 4 HOH A 86 586 426 HOH HOH . D 4 HOH A 87 587 460 HOH HOH . D 4 HOH A 88 588 519 HOH HOH . D 4 HOH A 89 589 444 HOH HOH . D 4 HOH A 90 590 520 HOH HOH . D 4 HOH A 91 591 616 HOH HOH . D 4 HOH A 92 592 503 HOH HOH . D 4 HOH A 93 593 704 HOH HOH . D 4 HOH A 94 594 533 HOH HOH . D 4 HOH A 95 595 540 HOH HOH . D 4 HOH A 96 596 559 HOH HOH . D 4 HOH A 97 597 590 HOH HOH . D 4 HOH A 98 598 418 HOH HOH . D 4 HOH A 99 599 403 HOH HOH . D 4 HOH A 100 600 468 HOH HOH . D 4 HOH A 101 601 554 HOH HOH . D 4 HOH A 102 602 522 HOH HOH . D 4 HOH A 103 603 496 HOH HOH . D 4 HOH A 104 604 489 HOH HOH . D 4 HOH A 105 605 703 HOH HOH . D 4 HOH A 106 606 556 HOH HOH . D 4 HOH A 107 607 440 HOH HOH . D 4 HOH A 108 608 668 HOH HOH . D 4 HOH A 109 609 636 HOH HOH . D 4 HOH A 110 610 633 HOH HOH . D 4 HOH A 111 611 451 HOH HOH . D 4 HOH A 112 612 459 HOH HOH . D 4 HOH A 113 613 521 HOH HOH . D 4 HOH A 114 614 443 HOH HOH . D 4 HOH A 115 615 575 HOH HOH . D 4 HOH A 116 616 436 HOH HOH . D 4 HOH A 117 617 697 HOH HOH . D 4 HOH A 118 618 700 HOH HOH . D 4 HOH A 119 619 463 HOH HOH . D 4 HOH A 120 620 455 HOH HOH . D 4 HOH A 121 621 486 HOH HOH . D 4 HOH A 122 622 424 HOH HOH . D 4 HOH A 123 623 475 HOH HOH . D 4 HOH A 124 624 527 HOH HOH . D 4 HOH A 125 625 526 HOH HOH . D 4 HOH A 126 626 672 HOH HOH . D 4 HOH A 127 627 474 HOH HOH . D 4 HOH A 128 628 561 HOH HOH . D 4 HOH A 129 629 416 HOH HOH . D 4 HOH A 130 630 669 HOH HOH . D 4 HOH A 131 631 513 HOH HOH . D 4 HOH A 132 632 420 HOH HOH . D 4 HOH A 133 633 553 HOH HOH . D 4 HOH A 134 634 530 HOH HOH . D 4 HOH A 135 635 484 HOH HOH . D 4 HOH A 136 636 677 HOH HOH . D 4 HOH A 137 637 439 HOH HOH . D 4 HOH A 138 638 699 HOH HOH . D 4 HOH A 139 639 546 HOH HOH . D 4 HOH A 140 640 488 HOH HOH . D 4 HOH A 141 641 422 HOH HOH . D 4 HOH A 142 642 456 HOH HOH . D 4 HOH A 143 643 458 HOH HOH . D 4 HOH A 144 644 562 HOH HOH . D 4 HOH A 145 645 492 HOH HOH . D 4 HOH A 146 646 594 HOH HOH . D 4 HOH A 147 647 648 HOH HOH . D 4 HOH A 148 648 438 HOH HOH . D 4 HOH A 149 649 657 HOH HOH . D 4 HOH A 150 650 478 HOH HOH . D 4 HOH A 151 651 684 HOH HOH . D 4 HOH A 152 652 476 HOH HOH . D 4 HOH A 153 653 477 HOH HOH . D 4 HOH A 154 654 442 HOH HOH . D 4 HOH A 155 655 454 HOH HOH . D 4 HOH A 156 656 506 HOH HOH . D 4 HOH A 157 657 646 HOH HOH . D 4 HOH A 158 658 551 HOH HOH . D 4 HOH A 159 659 539 HOH HOH . D 4 HOH A 160 660 563 HOH HOH . D 4 HOH A 161 661 543 HOH HOH . D 4 HOH A 162 662 498 HOH HOH . D 4 HOH A 163 663 457 HOH HOH . D 4 HOH A 164 664 535 HOH HOH . D 4 HOH A 165 665 638 HOH HOH . D 4 HOH A 166 666 702 HOH HOH . D 4 HOH A 167 667 552 HOH HOH . D 4 HOH A 168 668 490 HOH HOH . D 4 HOH A 169 669 432 HOH HOH . D 4 HOH A 170 670 679 HOH HOH . D 4 HOH A 171 671 472 HOH HOH . D 4 HOH A 172 672 690 HOH HOH . D 4 HOH A 173 673 624 HOH HOH . D 4 HOH A 174 674 685 HOH HOH . D 4 HOH A 175 675 618 HOH HOH . D 4 HOH A 176 676 675 HOH HOH . D 4 HOH A 177 677 665 HOH HOH . D 4 HOH A 178 678 632 HOH HOH . D 4 HOH A 179 679 598 HOH HOH . D 4 HOH A 180 680 469 HOH HOH . D 4 HOH A 181 681 514 HOH HOH . D 4 HOH A 182 682 523 HOH HOH . D 4 HOH A 183 683 637 HOH HOH . D 4 HOH A 184 684 694 HOH HOH . D 4 HOH A 185 685 653 HOH HOH . D 4 HOH A 186 686 659 HOH HOH . D 4 HOH A 187 687 565 HOH HOH . D 4 HOH A 188 688 661 HOH HOH . D 4 HOH A 189 689 542 HOH HOH . D 4 HOH A 190 690 555 HOH HOH . D 4 HOH A 191 691 647 HOH HOH . D 4 HOH A 192 692 560 HOH HOH . D 4 HOH A 193 693 687 HOH HOH . D 4 HOH A 194 694 701 HOH HOH . D 4 HOH A 195 695 502 HOH HOH . D 4 HOH A 196 696 656 HOH HOH . D 4 HOH A 197 697 567 HOH HOH . D 4 HOH A 198 698 453 HOH HOH . D 4 HOH A 199 699 597 HOH HOH . D 4 HOH A 200 700 483 HOH HOH . D 4 HOH A 201 701 574 HOH HOH . D 4 HOH A 202 702 617 HOH HOH . D 4 HOH A 203 703 614 HOH HOH . D 4 HOH A 204 704 674 HOH HOH . D 4 HOH A 205 705 662 HOH HOH . D 4 HOH A 206 706 487 HOH HOH . D 4 HOH A 207 707 433 HOH HOH . D 4 HOH A 208 708 654 HOH HOH . D 4 HOH A 209 709 630 HOH HOH . D 4 HOH A 210 710 579 HOH HOH . D 4 HOH A 211 711 682 HOH HOH . D 4 HOH A 212 712 529 HOH HOH . D 4 HOH A 213 713 639 HOH HOH . D 4 HOH A 214 714 595 HOH HOH . D 4 HOH A 215 715 462 HOH HOH . D 4 HOH A 216 716 670 HOH HOH . D 4 HOH A 217 717 650 HOH HOH . D 4 HOH A 218 718 651 HOH HOH . D 4 HOH A 219 719 541 HOH HOH . D 4 HOH A 220 720 652 HOH HOH . D 4 HOH A 221 721 663 HOH HOH . D 4 HOH A 222 722 649 HOH HOH . D 4 HOH A 223 723 471 HOH HOH . D 4 HOH A 224 724 655 HOH HOH . D 4 HOH A 225 725 681 HOH HOH . D 4 HOH A 226 726 512 HOH HOH . D 4 HOH A 227 727 645 HOH HOH . D 4 HOH A 228 728 608 HOH HOH . D 4 HOH A 229 729 525 HOH HOH . D 4 HOH A 230 730 642 HOH HOH . D 4 HOH A 231 731 686 HOH HOH . D 4 HOH A 232 732 606 HOH HOH . D 4 HOH A 233 733 671 HOH HOH . D 4 HOH A 234 734 548 HOH HOH . D 4 HOH A 235 735 518 HOH HOH . D 4 HOH A 236 736 596 HOH HOH . D 4 HOH A 237 737 578 HOH HOH . D 4 HOH A 238 738 644 HOH HOH . D 4 HOH A 239 739 667 HOH HOH . D 4 HOH A 240 740 473 HOH HOH . D 4 HOH A 241 741 643 HOH HOH . D 4 HOH A 242 742 680 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 A1AA8 . . . C 3 -64.946 24.933 -16.05 0.51 67.73 ? C01 A1AA8 402 A 1 HETATM 2 C C03 A1AA8 . . . C 3 -62.554 23.152 -16.647 0.51 65.64 ? C03 A1AA8 402 A 1 HETATM 3 C C05 A1AA8 . . . C 3 -60.452 24.245 -16.596 0.51 60.13 ? C05 A1AA8 402 A 1 HETATM 4 C C06 A1AA8 . . . C 3 -59.755 23.02 -16.572 0.51 54.51 ? C06 A1AA8 402 A 1 HETATM 5 C C07 A1AA8 . . . C 3 -60.522 21.824 -16.599 0.51 52.32 ? C07 A1AA8 402 A 1 HETATM 6 C C08 A1AA8 . . . C 3 -61.927 21.834 -16.635 0.51 56.02 ? C08 A1AA8 402 A 1 HETATM 7 C C09 A1AA8 . . . C 3 -62.624 20.519 -16.66 0.51 55.18 ? C09 A1AA8 402 A 1 HETATM 8 N N04 A1AA8 . . . C 3 -61.824 24.315 -16.632 0.51 62.18 ? N04 A1AA8 402 A 1 HETATM 9 N N11 A1AA8 . . . C 3 -63.555 20.118 -17.592 0.51 56.74 ? N11 A1AA8 402 A 1 HETATM 10 O O10 A1AA8 . . . C 3 -62.407 19.647 -15.77 0.51 44.01 ? O10 A1AA8 402 A 1 HETATM 11 S S02 A1AA8 . . . C 3 -64.37 23.318 -16.698 0.51 65.9 ? S02 A1AA8 402 A 1 HETATM 12 H H011 A1AA8 . . . C 3 -66.044 25.039 -16.119 0.51 67.16 ? H011 A1AA8 402 A 1 HETATM 13 H H012 A1AA8 . . . C 3 -64.548 25.777 -16.611 0.51 67.16 ? H012 A1AA8 402 A 1 HETATM 14 H H013 A1AA8 . . . C 3 -64.715 25.073 -14.996 0.51 67.16 ? H013 A1AA8 402 A 1 HETATM 15 H H051 A1AA8 . . . C 3 -59.881 25.176 -16.576 0.51 59.11 ? H051 A1AA8 402 A 1 HETATM 16 H H061 A1AA8 . . . C 3 -58.678 23.012 -16.545 0.51 55.55 ? H061 A1AA8 402 A 1 HETATM 17 H H071 A1AA8 . . . C 3 -59.944 20.91 -16.583 0.51 54.14 ? H071 A1AA8 402 A 1 HETATM 18 H H111 A1AA8 . . . C 3 -63.827 20.716 -18.353 0.51 56.08 ? H111 A1AA8 402 A 1 HETATM 19 H H112 A1AA8 . . . C 3 -64.029 19.235 -17.606 0.51 56.08 ? H112 A1AA8 402 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #