data_7GT9 # _model_server_result.job_id jVHC1iToyyas-85WSuGUEA _model_server_result.datetime_utc '2024-11-13 07:15:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gt9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7GT9 # _exptl.entry_id 7GT9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 173.168 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GT9 _cell.length_a 90.515 _cell.length_b 90.515 _cell.length_c 106.777 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H7 N O2' _chem_comp.formula_weight 173.168 _chem_comp.id A1ABR _chem_comp.mon_nstd_flag . _chem_comp.name (3R)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N13 C12 A1ABR trip 1 n n C12 C03 A1ABR sing 2 n n O01 C02 A1ABR doub 3 n n C03 C02 A1ABR sing 4 n n C03 C04 A1ABR sing 5 n n C02 C11 A1ABR sing 6 n n C04 O05 A1ABR sing 7 n n C11 C10 A1ABR doub 8 n y C11 C06 A1ABR sing 9 n y C10 C09 A1ABR sing 10 n y O05 C06 A1ABR sing 11 n n C06 C07 A1ABR doub 12 n y C09 C08 A1ABR doub 13 n y C07 C08 A1ABR sing 14 n y C10 H101 A1ABR sing 15 n n C03 H1 A1ABR sing 16 n n C04 H041 A1ABR sing 17 n n C04 H2 A1ABR sing 18 n n C07 H071 A1ABR sing 19 n n C08 H081 A1ABR sing 20 n n C09 H091 A1ABR sing 21 n n # _atom_sites.entry_id 7GT9 _atom_sites.fract_transf_matrix[1][1] 0.011048 _atom_sites.fract_transf_matrix[1][2] 0.006379 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009365 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 401 500 TRS TRS . C 3 A1ABR A 1 402 301 A1ABR LIG . D 4 HOH A 1 501 692 HOH HOH . D 4 HOH A 2 502 576 HOH HOH . D 4 HOH A 3 503 678 HOH HOH . D 4 HOH A 4 504 696 HOH HOH . D 4 HOH A 5 505 621 HOH HOH . D 4 HOH A 6 506 673 HOH HOH . D 4 HOH A 7 507 464 HOH HOH . D 4 HOH A 8 508 482 HOH HOH . D 4 HOH A 9 509 589 HOH HOH . D 4 HOH A 10 510 436 HOH HOH . D 4 HOH A 11 511 470 HOH HOH . D 4 HOH A 12 512 685 HOH HOH . D 4 HOH A 13 513 569 HOH HOH . D 4 HOH A 14 514 517 HOH HOH . D 4 HOH A 15 515 419 HOH HOH . D 4 HOH A 16 516 510 HOH HOH . D 4 HOH A 17 517 524 HOH HOH . D 4 HOH A 18 518 423 HOH HOH . D 4 HOH A 19 519 450 HOH HOH . D 4 HOH A 20 520 590 HOH HOH . D 4 HOH A 21 521 698 HOH HOH . D 4 HOH A 22 522 566 HOH HOH . D 4 HOH A 23 523 538 HOH HOH . D 4 HOH A 24 524 689 HOH HOH . D 4 HOH A 25 525 427 HOH HOH . D 4 HOH A 26 526 664 HOH HOH . D 4 HOH A 27 527 628 HOH HOH . D 4 HOH A 28 528 421 HOH HOH . D 4 HOH A 29 529 497 HOH HOH . D 4 HOH A 30 530 501 HOH HOH . D 4 HOH A 31 531 414 HOH HOH . D 4 HOH A 32 532 688 HOH HOH . D 4 HOH A 33 533 611 HOH HOH . D 4 HOH A 34 534 434 HOH HOH . D 4 HOH A 35 535 528 HOH HOH . D 4 HOH A 36 536 426 HOH HOH . D 4 HOH A 37 537 461 HOH HOH . D 4 HOH A 38 538 407 HOH HOH . D 4 HOH A 39 539 404 HOH HOH . D 4 HOH A 40 540 448 HOH HOH . D 4 HOH A 41 541 704 HOH HOH . D 4 HOH A 42 542 693 HOH HOH . D 4 HOH A 43 543 460 HOH HOH . D 4 HOH A 44 544 666 HOH HOH . D 4 HOH A 45 545 491 HOH HOH . D 4 HOH A 46 546 520 HOH HOH . D 4 HOH A 47 547 408 HOH HOH . D 4 HOH A 48 548 411 HOH HOH . D 4 HOH A 49 549 429 HOH HOH . D 4 HOH A 50 550 658 HOH HOH . D 4 HOH A 51 551 406 HOH HOH . D 4 HOH A 52 552 466 HOH HOH . D 4 HOH A 53 553 449 HOH HOH . D 4 HOH A 54 554 577 HOH HOH . D 4 HOH A 55 555 695 HOH HOH . D 4 HOH A 56 556 446 HOH HOH . D 4 HOH A 57 557 507 HOH HOH . D 4 HOH A 58 558 467 HOH HOH . D 4 HOH A 59 559 619 HOH HOH . D 4 HOH A 60 560 435 HOH HOH . D 4 HOH A 61 561 412 HOH HOH . D 4 HOH A 62 562 638 HOH HOH . D 4 HOH A 63 563 440 HOH HOH . D 4 HOH A 64 564 652 HOH HOH . D 4 HOH A 65 565 431 HOH HOH . D 4 HOH A 66 566 413 HOH HOH . D 4 HOH A 67 567 409 HOH HOH . D 4 HOH A 68 568 616 HOH HOH . D 4 HOH A 69 569 493 HOH HOH . D 4 HOH A 70 570 697 HOH HOH . D 4 HOH A 71 571 465 HOH HOH . D 4 HOH A 72 572 575 HOH HOH . D 4 HOH A 73 573 468 HOH HOH . D 4 HOH A 74 574 504 HOH HOH . D 4 HOH A 75 575 417 HOH HOH . D 4 HOH A 76 576 405 HOH HOH . D 4 HOH A 77 577 665 HOH HOH . D 4 HOH A 78 578 481 HOH HOH . D 4 HOH A 79 579 677 HOH HOH . D 4 HOH A 80 580 522 HOH HOH . D 4 HOH A 81 581 452 HOH HOH . D 4 HOH A 82 582 631 HOH HOH . D 4 HOH A 83 583 625 HOH HOH . D 4 HOH A 84 584 402 HOH HOH . D 4 HOH A 85 585 594 HOH HOH . D 4 HOH A 86 586 437 HOH HOH . D 4 HOH A 87 587 536 HOH HOH . D 4 HOH A 88 588 430 HOH HOH . D 4 HOH A 89 589 415 HOH HOH . D 4 HOH A 90 590 700 HOH HOH . D 4 HOH A 91 591 533 HOH HOH . D 4 HOH A 92 592 635 HOH HOH . D 4 HOH A 93 593 530 HOH HOH . D 4 HOH A 94 594 519 HOH HOH . D 4 HOH A 95 595 627 HOH HOH . D 4 HOH A 96 596 672 HOH HOH . D 4 HOH A 97 597 699 HOH HOH . D 4 HOH A 98 598 443 HOH HOH . D 4 HOH A 99 599 410 HOH HOH . D 4 HOH A 100 600 502 HOH HOH . D 4 HOH A 101 601 475 HOH HOH . D 4 HOH A 102 602 416 HOH HOH . D 4 HOH A 103 603 587 HOH HOH . D 4 HOH A 104 604 403 HOH HOH . D 4 HOH A 105 605 581 HOH HOH . D 4 HOH A 106 606 479 HOH HOH . D 4 HOH A 107 607 513 HOH HOH . D 4 HOH A 108 608 509 HOH HOH . D 4 HOH A 109 609 486 HOH HOH . D 4 HOH A 110 610 539 HOH HOH . D 4 HOH A 111 611 459 HOH HOH . D 4 HOH A 112 612 605 HOH HOH . D 4 HOH A 113 613 474 HOH HOH . D 4 HOH A 114 614 496 HOH HOH . D 4 HOH A 115 615 526 HOH HOH . D 4 HOH A 116 616 444 HOH HOH . D 4 HOH A 117 617 447 HOH HOH . D 4 HOH A 118 618 668 HOH HOH . D 4 HOH A 119 619 424 HOH HOH . D 4 HOH A 120 620 455 HOH HOH . D 4 HOH A 121 621 561 HOH HOH . D 4 HOH A 122 622 441 HOH HOH . D 4 HOH A 123 623 669 HOH HOH . D 4 HOH A 124 624 505 HOH HOH . D 4 HOH A 125 625 549 HOH HOH . D 4 HOH A 126 626 660 HOH HOH . D 4 HOH A 127 627 702 HOH HOH . D 4 HOH A 128 628 540 HOH HOH . D 4 HOH A 129 629 439 HOH HOH . D 4 HOH A 130 630 556 HOH HOH . D 4 HOH A 131 631 503 HOH HOH . D 4 HOH A 132 632 580 HOH HOH . D 4 HOH A 133 633 484 HOH HOH . D 4 HOH A 134 634 420 HOH HOH . D 4 HOH A 135 635 463 HOH HOH . D 4 HOH A 136 636 563 HOH HOH . D 4 HOH A 137 637 422 HOH HOH . D 4 HOH A 138 638 477 HOH HOH . D 4 HOH A 139 639 457 HOH HOH . D 4 HOH A 140 640 559 HOH HOH . D 4 HOH A 141 641 636 HOH HOH . D 4 HOH A 142 642 418 HOH HOH . D 4 HOH A 143 643 438 HOH HOH . D 4 HOH A 144 644 562 HOH HOH . D 4 HOH A 145 645 554 HOH HOH . D 4 HOH A 146 646 521 HOH HOH . D 4 HOH A 147 647 454 HOH HOH . D 4 HOH A 148 648 451 HOH HOH . D 4 HOH A 149 649 489 HOH HOH . D 4 HOH A 150 650 535 HOH HOH . D 4 HOH A 151 651 527 HOH HOH . D 4 HOH A 152 652 456 HOH HOH . D 4 HOH A 153 653 553 HOH HOH . D 4 HOH A 154 654 676 HOH HOH . D 4 HOH A 155 655 684 HOH HOH . D 4 HOH A 156 656 543 HOH HOH . D 4 HOH A 157 657 458 HOH HOH . D 4 HOH A 158 658 618 HOH HOH . D 4 HOH A 159 659 602 HOH HOH . D 4 HOH A 160 660 492 HOH HOH . D 4 HOH A 161 661 546 HOH HOH . D 4 HOH A 162 662 488 HOH HOH . D 4 HOH A 163 663 560 HOH HOH . D 4 HOH A 164 664 648 HOH HOH . D 4 HOH A 165 665 442 HOH HOH . D 4 HOH A 166 666 506 HOH HOH . D 4 HOH A 167 667 514 HOH HOH . D 4 HOH A 168 668 476 HOH HOH . D 4 HOH A 169 669 478 HOH HOH . D 4 HOH A 170 670 551 HOH HOH . D 4 HOH A 171 671 552 HOH HOH . D 4 HOH A 172 672 432 HOH HOH . D 4 HOH A 173 673 472 HOH HOH . D 4 HOH A 174 674 624 HOH HOH . D 4 HOH A 175 675 498 HOH HOH . D 4 HOH A 176 676 683 HOH HOH . D 4 HOH A 177 677 675 HOH HOH . D 4 HOH A 178 678 523 HOH HOH . D 4 HOH A 179 679 694 HOH HOH . D 4 HOH A 180 680 647 HOH HOH . D 4 HOH A 181 681 662 HOH HOH . D 4 HOH A 182 682 687 HOH HOH . D 4 HOH A 183 683 657 HOH HOH . D 4 HOH A 184 684 653 HOH HOH . D 4 HOH A 185 685 541 HOH HOH . D 4 HOH A 186 686 555 HOH HOH . D 4 HOH A 187 687 637 HOH HOH . D 4 HOH A 188 688 469 HOH HOH . D 4 HOH A 189 689 529 HOH HOH . D 4 HOH A 190 690 597 HOH HOH . D 4 HOH A 191 691 661 HOH HOH . D 4 HOH A 192 692 656 HOH HOH . D 4 HOH A 193 693 659 HOH HOH . D 4 HOH A 194 694 598 HOH HOH . D 4 HOH A 195 695 542 HOH HOH . D 4 HOH A 196 696 490 HOH HOH . D 4 HOH A 197 697 453 HOH HOH . D 4 HOH A 198 698 565 HOH HOH . D 4 HOH A 199 699 679 HOH HOH . D 4 HOH A 200 700 701 HOH HOH . D 4 HOH A 201 701 646 HOH HOH . D 4 HOH A 202 702 483 HOH HOH . D 4 HOH A 203 703 433 HOH HOH . D 4 HOH A 204 704 487 HOH HOH . D 4 HOH A 205 705 614 HOH HOH . D 4 HOH A 206 706 579 HOH HOH . D 4 HOH A 207 707 574 HOH HOH . D 4 HOH A 208 708 630 HOH HOH . D 4 HOH A 209 709 567 HOH HOH . D 4 HOH A 210 710 654 HOH HOH . D 4 HOH A 211 711 617 HOH HOH . D 4 HOH A 212 712 674 HOH HOH . D 4 HOH A 213 713 595 HOH HOH . D 4 HOH A 214 714 690 HOH HOH . D 4 HOH A 215 715 682 HOH HOH . D 4 HOH A 216 716 663 HOH HOH . D 4 HOH A 217 717 649 HOH HOH . D 4 HOH A 218 718 548 HOH HOH . D 4 HOH A 219 719 471 HOH HOH . D 4 HOH A 220 720 670 HOH HOH . D 4 HOH A 221 721 525 HOH HOH . D 4 HOH A 222 722 608 HOH HOH . D 4 HOH A 223 723 650 HOH HOH . D 4 HOH A 224 724 606 HOH HOH . D 4 HOH A 225 725 462 HOH HOH . D 4 HOH A 226 726 512 HOH HOH . D 4 HOH A 227 727 671 HOH HOH . D 4 HOH A 228 728 651 HOH HOH . D 4 HOH A 229 729 655 HOH HOH . D 4 HOH A 230 730 681 HOH HOH . D 4 HOH A 231 731 518 HOH HOH . D 4 HOH A 232 732 686 HOH HOH . D 4 HOH A 233 733 596 HOH HOH . D 4 HOH A 234 734 473 HOH HOH . D 4 HOH A 235 735 578 HOH HOH . D 4 HOH A 236 736 667 HOH HOH . D 4 HOH A 237 737 645 HOH HOH . D 4 HOH A 238 738 680 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1ABR . . . C 3 42.136 -15.025 -24.839 0.42 61.58 ? C10 A1ABR 402 A 1 HETATM 2 C C02 A1ABR . . . C 3 43.633 -16.47 -26.258 0.42 57.43 ? C02 A1ABR 402 A 1 HETATM 3 C C03 A1ABR . . . C 3 45.018 -16.988 -26.397 0.42 56.49 ? C03 A1ABR 402 A 1 HETATM 4 C C04 A1ABR . . . C 3 45.717 -17.087 -25.236 0.42 55.45 ? C04 A1ABR 402 A 1 HETATM 5 C C06 A1ABR . . . C 3 44.141 -15.953 -23.86 0.42 57.78 ? C06 A1ABR 402 A 1 HETATM 6 C C07 A1ABR . . . C 3 43.791 -15.295 -22.657 0.42 58.91 ? C07 A1ABR 402 A 1 HETATM 7 C C08 A1ABR . . . C 3 42.624 -14.513 -22.551 0.42 63.1 ? C08 A1ABR 402 A 1 HETATM 8 C C09 A1ABR . . . C 3 41.783 -14.379 -23.655 0.42 63.35 ? C09 A1ABR 402 A 1 HETATM 9 C C11 A1ABR . . . C 3 43.29 -15.803 -24.958 0.42 59.78 ? C11 A1ABR 402 A 1 HETATM 10 C C12 A1ABR . . . C 3 45.335 -17.747 -27.538 0.42 56.82 ? C12 A1ABR 402 A 1 HETATM 11 N N13 A1ABR . . . C 3 45.39 -18.517 -28.452 0.42 56.62 ? N13 A1ABR 402 A 1 HETATM 12 O O01 A1ABR . . . C 3 42.838 -16.593 -27.179 0.42 58.17 ? O01 A1ABR 402 A 1 HETATM 13 O O05 A1ABR . . . C 3 45.26 -16.704 -23.98 0.42 55.42 ? O05 A1ABR 402 A 1 HETATM 14 H H101 A1ABR . . . C 3 41.427 -14.874 -25.693 0.42 61.4 ? H101 A1ABR 402 A 1 HETATM 15 H H041 A1ABR . . . C 3 46.714 -17.621 -25.222 0.42 55.71 ? H041 A1ABR 402 A 1 HETATM 16 H H071 A1ABR . . . C 3 44.359 -15.317 -21.694 0.42 59.67 ? H071 A1ABR 402 A 1 HETATM 17 H H081 A1ABR . . . C 3 42.362 -14.01 -21.59 0.42 61.94 ? H081 A1ABR 402 A 1 HETATM 18 H H091 A1ABR . . . C 3 40.865 -13.783 -23.633 0.42 62.59 ? H091 A1ABR 402 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #