data_7GTC # _model_server_result.job_id uh-4MrlHBpdHEljG5Z35xw _model_server_result.datetime_utc '2024-11-22 06:13:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gtc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7GTC # _exptl.entry_id 7GTC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GTC _cell.length_a 90.314 _cell.length_b 90.314 _cell.length_c 106.872 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GTC _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 356 n n C C2 TRS sing 357 n n C C3 TRS sing 358 n n C N TRS sing 359 n n C1 O1 TRS sing 360 n n C1 H11 TRS sing 361 n n C1 H12 TRS sing 362 n n C2 O2 TRS sing 363 n n C2 H21 TRS sing 364 n n C2 H22 TRS sing 365 n n C3 O3 TRS sing 366 n n C3 H31 TRS sing 367 n n C3 H32 TRS sing 368 n n N HN1 TRS sing 369 n n N HN2 TRS sing 370 n n N HN3 TRS sing 371 n n O1 HO1 TRS sing 372 n n O2 HO2 TRS sing 373 n n O3 HO3 TRS sing 374 n n # _atom_sites.entry_id 7GTC _atom_sites.fract_transf_matrix[1][1] 0.011072 _atom_sites.fract_transf_matrix[1][2] 0.006393 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009357 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 401 500 TRS TRS . C 3 LVD A 1 402 301 LVD LIG . D 3 LVD A 1 403 302 LVD LIG . E 3 LVD A 1 404 303 LVD LIG . F 4 HOH A 1 501 576 HOH HOH . F 4 HOH A 2 502 696 HOH HOH . F 4 HOH A 3 503 678 HOH HOH . F 4 HOH A 4 504 621 HOH HOH . F 4 HOH A 5 505 673 HOH HOH . F 4 HOH A 6 506 464 HOH HOH . F 4 HOH A 7 507 524 HOH HOH . F 4 HOH A 8 508 634 HOH HOH . F 4 HOH A 9 509 566 HOH HOH . F 4 HOH A 10 510 470 HOH HOH . F 4 HOH A 11 511 482 HOH HOH . F 4 HOH A 12 512 695 HOH HOH . F 4 HOH A 13 513 421 HOH HOH . F 4 HOH A 14 514 419 HOH HOH . F 4 HOH A 15 515 664 HOH HOH . F 4 HOH A 16 516 423 HOH HOH . F 4 HOH A 17 517 704 HOH HOH . F 4 HOH A 18 518 688 HOH HOH . F 4 HOH A 19 519 436 HOH HOH . F 4 HOH A 20 520 569 HOH HOH . F 4 HOH A 21 521 497 HOH HOH . F 4 HOH A 22 522 589 HOH HOH . F 4 HOH A 23 523 538 HOH HOH . F 4 HOH A 24 524 491 HOH HOH . F 4 HOH A 25 525 611 HOH HOH . F 4 HOH A 26 526 685 HOH HOH . F 4 HOH A 27 527 408 HOH HOH . F 4 HOH A 28 528 517 HOH HOH . F 4 HOH A 29 529 635 HOH HOH . F 4 HOH A 30 530 507 HOH HOH . F 4 HOH A 31 531 658 HOH HOH . F 4 HOH A 32 532 450 HOH HOH . F 4 HOH A 33 533 540 HOH HOH . F 4 HOH A 34 534 590 HOH HOH . F 4 HOH A 35 535 427 HOH HOH . F 4 HOH A 36 536 414 HOH HOH . F 4 HOH A 37 537 411 HOH HOH . F 4 HOH A 38 538 493 HOH HOH . F 4 HOH A 39 539 677 HOH HOH . F 4 HOH A 40 540 409 HOH HOH . F 4 HOH A 41 541 666 HOH HOH . F 4 HOH A 42 542 404 HOH HOH . F 4 HOH A 43 543 449 HOH HOH . F 4 HOH A 44 544 429 HOH HOH . F 4 HOH A 45 545 434 HOH HOH . F 4 HOH A 46 546 628 HOH HOH . F 4 HOH A 47 547 479 HOH HOH . F 4 HOH A 48 548 446 HOH HOH . F 4 HOH A 49 549 631 HOH HOH . F 4 HOH A 50 550 536 HOH HOH . F 4 HOH A 51 551 504 HOH HOH . F 4 HOH A 52 552 407 HOH HOH . F 4 HOH A 53 553 435 HOH HOH . F 4 HOH A 54 554 468 HOH HOH . F 4 HOH A 55 555 587 HOH HOH . F 4 HOH A 56 556 417 HOH HOH . F 4 HOH A 57 557 528 HOH HOH . F 4 HOH A 58 558 522 HOH HOH . F 4 HOH A 59 559 426 HOH HOH . F 4 HOH A 60 560 440 HOH HOH . F 4 HOH A 61 561 406 HOH HOH . F 4 HOH A 62 562 431 HOH HOH . F 4 HOH A 63 563 412 HOH HOH . F 4 HOH A 64 564 413 HOH HOH . F 4 HOH A 65 565 443 HOH HOH . F 4 HOH A 66 566 496 HOH HOH . F 4 HOH A 67 567 619 HOH HOH . F 4 HOH A 68 568 633 HOH HOH . F 4 HOH A 69 569 402 HOH HOH . F 4 HOH A 70 570 465 HOH HOH . F 4 HOH A 71 571 467 HOH HOH . F 4 HOH A 72 572 481 HOH HOH . F 4 HOH A 73 573 437 HOH HOH . F 4 HOH A 74 574 430 HOH HOH . F 4 HOH A 75 575 410 HOH HOH . F 4 HOH A 76 576 405 HOH HOH . F 4 HOH A 77 577 466 HOH HOH . F 4 HOH A 78 578 698 HOH HOH . F 4 HOH A 79 579 520 HOH HOH . F 4 HOH A 80 580 627 HOH HOH . F 4 HOH A 81 581 575 HOH HOH . F 4 HOH A 82 582 625 HOH HOH . F 4 HOH A 83 583 581 HOH HOH . F 4 HOH A 84 584 703 HOH HOH . F 4 HOH A 85 585 460 HOH HOH . F 4 HOH A 86 586 527 HOH HOH . F 4 HOH A 87 587 549 HOH HOH . F 4 HOH A 88 588 556 HOH HOH . F 4 HOH A 89 589 415 HOH HOH . F 4 HOH A 90 590 444 HOH HOH . F 4 HOH A 91 591 539 HOH HOH . F 4 HOH A 92 592 700 HOH HOH . F 4 HOH A 93 593 416 HOH HOH . F 4 HOH A 94 594 552 HOH HOH . F 4 HOH A 95 595 533 HOH HOH . F 4 HOH A 96 596 594 HOH HOH . F 4 HOH A 97 597 486 HOH HOH . F 4 HOH A 98 598 699 HOH HOH . F 4 HOH A 99 599 553 HOH HOH . F 4 HOH A 100 600 530 HOH HOH . F 4 HOH A 101 601 669 HOH HOH . F 4 HOH A 102 602 616 HOH HOH . F 4 HOH A 103 603 519 HOH HOH . F 4 HOH A 104 604 424 HOH HOH . F 4 HOH A 105 605 447 HOH HOH . F 4 HOH A 106 606 668 HOH HOH . F 4 HOH A 107 607 484 HOH HOH . F 4 HOH A 108 608 403 HOH HOH . F 4 HOH A 109 609 441 HOH HOH . F 4 HOH A 110 610 501 HOH HOH . F 4 HOH A 111 611 554 HOH HOH . F 4 HOH A 112 612 503 HOH HOH . F 4 HOH A 113 613 461 HOH HOH . F 4 HOH A 114 614 455 HOH HOH . F 4 HOH A 115 615 660 HOH HOH . F 4 HOH A 116 616 675 HOH HOH . F 4 HOH A 117 617 475 HOH HOH . F 4 HOH A 118 618 463 HOH HOH . F 4 HOH A 119 619 672 HOH HOH . F 4 HOH A 120 620 420 HOH HOH . F 4 HOH A 121 621 457 HOH HOH . F 4 HOH A 122 622 648 HOH HOH . F 4 HOH A 123 623 489 HOH HOH . F 4 HOH A 124 624 439 HOH HOH . F 4 HOH A 125 625 562 HOH HOH . F 4 HOH A 126 626 521 HOH HOH . F 4 HOH A 127 627 509 HOH HOH . F 4 HOH A 128 628 459 HOH HOH . F 4 HOH A 129 629 474 HOH HOH . F 4 HOH A 130 630 526 HOH HOH . F 4 HOH A 131 631 636 HOH HOH . F 4 HOH A 132 632 442 HOH HOH . F 4 HOH A 133 633 418 HOH HOH . F 4 HOH A 134 634 422 HOH HOH . F 4 HOH A 135 635 702 HOH HOH . F 4 HOH A 136 636 563 HOH HOH . F 4 HOH A 137 637 451 HOH HOH . F 4 HOH A 138 638 438 HOH HOH . F 4 HOH A 139 639 665 HOH HOH . F 4 HOH A 140 640 546 HOH HOH . F 4 HOH A 141 641 477 HOH HOH . F 4 HOH A 142 642 560 HOH HOH . F 4 HOH A 143 643 602 HOH HOH . F 4 HOH A 144 644 624 HOH HOH . F 4 HOH A 145 645 454 HOH HOH . F 4 HOH A 146 646 456 HOH HOH . F 4 HOH A 147 647 657 HOH HOH . F 4 HOH A 148 648 551 HOH HOH . F 4 HOH A 149 649 535 HOH HOH . F 4 HOH A 150 650 492 HOH HOH . F 4 HOH A 151 651 472 HOH HOH . F 4 HOH A 152 652 514 HOH HOH . F 4 HOH A 153 653 653 HOH HOH . F 4 HOH A 154 654 488 HOH HOH . F 4 HOH A 155 655 506 HOH HOH . F 4 HOH A 156 656 476 HOH HOH . F 4 HOH A 157 657 684 HOH HOH . F 4 HOH A 158 658 478 HOH HOH . F 4 HOH A 159 659 510 HOH HOH . F 4 HOH A 160 660 432 HOH HOH . F 4 HOH A 161 661 638 HOH HOH . F 4 HOH A 162 662 543 HOH HOH . F 4 HOH A 163 663 654 HOH HOH . F 4 HOH A 164 664 687 HOH HOH . F 4 HOH A 165 665 458 HOH HOH . F 4 HOH A 166 666 662 HOH HOH . F 4 HOH A 167 667 659 HOH HOH . F 4 HOH A 168 668 469 HOH HOH . F 4 HOH A 169 669 598 HOH HOH . F 4 HOH A 170 670 453 HOH HOH . F 4 HOH A 171 671 490 HOH HOH . F 4 HOH A 172 672 637 HOH HOH . F 4 HOH A 173 673 523 HOH HOH . F 4 HOH A 174 674 487 HOH HOH . F 4 HOH A 175 675 597 HOH HOH . F 4 HOH A 176 676 701 HOH HOH . F 4 HOH A 177 677 541 HOH HOH . F 4 HOH A 178 678 656 HOH HOH . F 4 HOH A 179 679 646 HOH HOH . F 4 HOH A 180 680 542 HOH HOH . F 4 HOH A 181 681 647 HOH HOH . F 4 HOH A 182 682 661 HOH HOH . F 4 HOH A 183 683 433 HOH HOH . F 4 HOH A 184 684 565 HOH HOH . F 4 HOH A 185 685 483 HOH HOH . F 4 HOH A 186 686 614 HOH HOH . F 4 HOH A 187 687 529 HOH HOH . F 4 HOH A 188 688 690 HOH HOH . F 4 HOH A 189 689 652 HOH HOH . F 4 HOH A 190 690 694 HOH HOH . F 4 HOH A 191 691 630 HOH HOH . F 4 HOH A 192 692 574 HOH HOH . F 4 HOH A 193 693 679 HOH HOH . F 4 HOH A 194 694 674 HOH HOH . F 4 HOH A 195 695 462 HOH HOH . F 4 HOH A 196 696 579 HOH HOH . F 4 HOH A 197 697 595 HOH HOH . F 4 HOH A 198 698 670 HOH HOH . F 4 HOH A 199 699 639 HOH HOH . F 4 HOH A 200 700 680 HOH HOH . F 4 HOH A 201 701 645 HOH HOH . F 4 HOH A 202 702 502 HOH HOH . F 4 HOH A 203 703 567 HOH HOH . F 4 HOH A 204 704 649 HOH HOH . F 4 HOH A 205 705 663 HOH HOH . F 4 HOH A 206 706 471 HOH HOH . F 4 HOH A 207 707 525 HOH HOH . F 4 HOH A 208 708 650 HOH HOH . F 4 HOH A 209 709 655 HOH HOH . F 4 HOH A 210 710 608 HOH HOH . F 4 HOH A 211 711 512 HOH HOH . F 4 HOH A 212 712 606 HOH HOH . F 4 HOH A 213 713 681 HOH HOH . F 4 HOH A 214 714 686 HOH HOH . F 4 HOH A 215 715 548 HOH HOH . F 4 HOH A 216 716 596 HOH HOH . F 4 HOH A 217 717 473 HOH HOH . F 4 HOH A 218 718 667 HOH HOH . F 4 HOH A 219 719 578 HOH HOH . F 4 HOH A 220 720 643 HOH HOH . F 4 HOH A 221 721 644 HOH HOH . F 4 HOH A 222 722 642 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 22.139 -40.493 -22.817 1 64 ? C TRS 401 A 1 HETATM 2 C C1 TRS . . . B 2 22.247 -39.52 -21.626 1 66.15 ? C1 TRS 401 A 1 HETATM 3 C C2 TRS . . . B 2 21.594 -39.804 -24.075 1 68.98 ? C2 TRS 401 A 1 HETATM 4 C C3 TRS . . . B 2 21.241 -41.666 -22.462 1 43.87 ? C3 TRS 401 A 1 HETATM 5 N N TRS . . . B 2 23.512 -41.065 -23.131 1 52.56 ? N TRS 401 A 1 HETATM 6 O O1 TRS . . . B 2 23.465 -38.757 -21.625 1 64.24 ? O1 TRS 401 A 1 HETATM 7 O O2 TRS . . . B 2 21.529 -38.391 -23.942 1 82.67 ? O2 TRS 401 A 1 HETATM 8 O O3 TRS . . . B 2 21.757 -42.44 -21.348 1 38.78 ? O3 TRS 401 A 1 HETATM 9 H H11 TRS . . . B 2 22.2 -40.035 -20.795 1 64.72 ? H11 TRS 401 A 1 HETATM 10 H H12 TRS . . . B 2 21.485 -38.909 -21.639 1 65.11 ? H12 TRS 401 A 1 HETATM 11 H H21 TRS . . . B 2 20.702 -40.153 -24.275 1 70.6 ? H21 TRS 401 A 1 HETATM 12 H H22 TRS . . . B 2 22.181 -40.016 -24.831 1 70.64 ? H22 TRS 401 A 1 HETATM 13 H H31 TRS . . . B 2 21.151 -42.246 -23.246 1 46.69 ? H31 TRS 401 A 1 HETATM 14 H H32 TRS . . . B 2 20.351 -41.327 -22.235 1 46.64 ? H32 TRS 401 A 1 HETATM 15 H HN1 TRS . . . B 2 23.455 -41.941 -23.369 1 55.76 ? HN1 TRS 401 A 1 HETATM 16 H HN2 TRS . . . B 2 24.055 -41.005 -22.405 1 55.83 ? HN2 TRS 401 A 1 HETATM 17 H HN3 TRS . . . B 2 23.91 -40.615 -23.813 1 55.94 ? HN3 TRS 401 A 1 HETATM 18 H HO1 TRS . . . B 2 23.599 -38.268 -20.722 1 37.32 ? HO1 TRS 401 A 1 HETATM 19 H HO2 TRS . . . B 2 21.848 -37.757 -24.455 1 41.96 ? HO2 TRS 401 A 1 HETATM 20 H HO3 TRS . . . B 2 22.569 -42.242 -21.204 1 40.62 ? HO3 TRS 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #