data_7GU5 # _model_server_result.job_id baqggVlU0KhZw0RUNOEHHg _model_server_result.datetime_utc '2025-07-07 21:49:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gu5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 7GU5 # _exptl.entry_id 7GU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7GU5 _cell.length_a 89.911 _cell.length_b 89.911 _cell.length_c 106.523 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 7GU5 _atom_sites.fract_transf_matrix[1][1] 0.011122 _atom_sites.fract_transf_matrix[1][2] 0.006421 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012843 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 500 500 TRS TRS . C 3 HOH A 1 601 287 HOH HOH . C 3 HOH A 2 602 273 HOH HOH . C 3 HOH A 3 603 267 HOH HOH . C 3 HOH A 4 604 247 HOH HOH . C 3 HOH A 5 605 184 HOH HOH . C 3 HOH A 6 606 178 HOH HOH . C 3 HOH A 7 607 210 HOH HOH . C 3 HOH A 8 608 274 HOH HOH . C 3 HOH A 9 609 144 HOH HOH . C 3 HOH A 10 610 40 HOH HOH . C 3 HOH A 11 611 249 HOH HOH . C 3 HOH A 12 612 128 HOH HOH . C 3 HOH A 13 613 171 HOH HOH . C 3 HOH A 14 614 199 HOH HOH . C 3 HOH A 15 615 141 HOH HOH . C 3 HOH A 16 616 212 HOH HOH . C 3 HOH A 17 617 22 HOH HOH . C 3 HOH A 18 618 197 HOH HOH . C 3 HOH A 19 619 265 HOH HOH . C 3 HOH A 20 620 120 HOH HOH . C 3 HOH A 21 621 59 HOH HOH . C 3 HOH A 22 622 160 HOH HOH . C 3 HOH A 23 623 70 HOH HOH . C 3 HOH A 24 624 101 HOH HOH . C 3 HOH A 25 625 58 HOH HOH . C 3 HOH A 26 626 90 HOH HOH . C 3 HOH A 27 627 20 HOH HOH . C 3 HOH A 28 628 143 HOH HOH . C 3 HOH A 29 629 78 HOH HOH . C 3 HOH A 30 630 167 HOH HOH . C 3 HOH A 31 631 60 HOH HOH . C 3 HOH A 32 632 38 HOH HOH . C 3 HOH A 33 633 27 HOH HOH . C 3 HOH A 34 634 142 HOH HOH . C 3 HOH A 35 635 279 HOH HOH . C 3 HOH A 36 636 255 HOH HOH . C 3 HOH A 37 637 217 HOH HOH . C 3 HOH A 38 638 63 HOH HOH . C 3 HOH A 39 639 126 HOH HOH . C 3 HOH A 40 640 8 HOH HOH . C 3 HOH A 41 641 183 HOH HOH . C 3 HOH A 42 642 166 HOH HOH . C 3 HOH A 43 643 18 HOH HOH . C 3 HOH A 44 644 4 HOH HOH . C 3 HOH A 45 645 55 HOH HOH . C 3 HOH A 46 646 214 HOH HOH . C 3 HOH A 47 647 25 HOH HOH . C 3 HOH A 48 648 252 HOH HOH . C 3 HOH A 49 649 11 HOH HOH . C 3 HOH A 50 650 95 HOH HOH . C 3 HOH A 51 651 209 HOH HOH . C 3 HOH A 52 652 26 HOH HOH . C 3 HOH A 53 653 13 HOH HOH . C 3 HOH A 54 654 150 HOH HOH . C 3 HOH A 55 655 176 HOH HOH . C 3 HOH A 56 656 57 HOH HOH . C 3 HOH A 57 657 71 HOH HOH . C 3 HOH A 58 658 224 HOH HOH . C 3 HOH A 59 659 31 HOH HOH . C 3 HOH A 60 660 10 HOH HOH . C 3 HOH A 61 661 6 HOH HOH . C 3 HOH A 62 662 44 HOH HOH . C 3 HOH A 63 663 81 HOH HOH . C 3 HOH A 64 664 285 HOH HOH . C 3 HOH A 65 665 5 HOH HOH . C 3 HOH A 66 666 42 HOH HOH . C 3 HOH A 67 667 48 HOH HOH . C 3 HOH A 68 668 123 HOH HOH . C 3 HOH A 69 669 3 HOH HOH . C 3 HOH A 70 670 86 HOH HOH . C 3 HOH A 71 671 187 HOH HOH . C 3 HOH A 72 672 134 HOH HOH . C 3 HOH A 73 673 109 HOH HOH . C 3 HOH A 74 674 1 HOH HOH . C 3 HOH A 75 675 280 HOH HOH . C 3 HOH A 76 676 206 HOH HOH . C 3 HOH A 77 677 151 HOH HOH . C 3 HOH A 78 678 24 HOH HOH . C 3 HOH A 79 679 84 HOH HOH . C 3 HOH A 80 680 264 HOH HOH . C 3 HOH A 81 681 114 HOH HOH . C 3 HOH A 82 682 12 HOH HOH . C 3 HOH A 83 683 79 HOH HOH . C 3 HOH A 84 684 32 HOH HOH . C 3 HOH A 85 685 33 HOH HOH . C 3 HOH A 86 686 72 HOH HOH . C 3 HOH A 87 687 146 HOH HOH . C 3 HOH A 88 688 234 HOH HOH . C 3 HOH A 89 689 14 HOH HOH . C 3 HOH A 90 690 54 HOH HOH . C 3 HOH A 91 691 139 HOH HOH . C 3 HOH A 92 692 115 HOH HOH . C 3 HOH A 93 693 186 HOH HOH . C 3 HOH A 94 694 28 HOH HOH . C 3 HOH A 95 695 98 HOH HOH . C 3 HOH A 96 696 103 HOH HOH . C 3 HOH A 97 697 191 HOH HOH . C 3 HOH A 98 698 34 HOH HOH . C 3 HOH A 99 699 99 HOH HOH . C 3 HOH A 100 700 272 HOH HOH . C 3 HOH A 101 701 16 HOH HOH . C 3 HOH A 102 702 43 HOH HOH . C 3 HOH A 103 703 41 HOH HOH . C 3 HOH A 104 704 168 HOH HOH . C 3 HOH A 105 705 154 HOH HOH . C 3 HOH A 106 706 235 HOH HOH . C 3 HOH A 107 707 127 HOH HOH . C 3 HOH A 108 708 69 HOH HOH . C 3 HOH A 109 709 9 HOH HOH . C 3 HOH A 110 710 19 HOH HOH . C 3 HOH A 111 711 256 HOH HOH . C 3 HOH A 112 712 266 HOH HOH . C 3 HOH A 113 713 2 HOH HOH . C 3 HOH A 114 714 45 HOH HOH . C 3 HOH A 115 715 163 HOH HOH . C 3 HOH A 116 716 208 HOH HOH . C 3 HOH A 117 717 230 HOH HOH . C 3 HOH A 118 718 119 HOH HOH . C 3 HOH A 119 719 7 HOH HOH . C 3 HOH A 120 720 245 HOH HOH . C 3 HOH A 121 721 261 HOH HOH . C 3 HOH A 122 722 77 HOH HOH . C 3 HOH A 123 723 61 HOH HOH . C 3 HOH A 124 724 169 HOH HOH . C 3 HOH A 125 725 116 HOH HOH . C 3 HOH A 126 726 17 HOH HOH . C 3 HOH A 127 727 225 HOH HOH . C 3 HOH A 128 728 238 HOH HOH . C 3 HOH A 129 729 62 HOH HOH . C 3 HOH A 130 730 53 HOH HOH . C 3 HOH A 131 731 74 HOH HOH . C 3 HOH A 132 732 36 HOH HOH . C 3 HOH A 133 733 46 HOH HOH . C 3 HOH A 134 734 170 HOH HOH . C 3 HOH A 135 735 179 HOH HOH . C 3 HOH A 136 736 37 HOH HOH . C 3 HOH A 137 737 100 HOH HOH . C 3 HOH A 138 738 89 HOH HOH . C 3 HOH A 139 739 278 HOH HOH . C 3 HOH A 140 740 23 HOH HOH . C 3 HOH A 141 741 107 HOH HOH . C 3 HOH A 142 742 106 HOH HOH . C 3 HOH A 143 743 21 HOH HOH . C 3 HOH A 144 744 192 HOH HOH . C 3 HOH A 145 745 85 HOH HOH . C 3 HOH A 146 746 94 HOH HOH . C 3 HOH A 147 747 83 HOH HOH . C 3 HOH A 148 748 122 HOH HOH . C 3 HOH A 149 749 15 HOH HOH . C 3 HOH A 150 750 97 HOH HOH . C 3 HOH A 151 751 129 HOH HOH . C 3 HOH A 152 752 244 HOH HOH . C 3 HOH A 153 753 80 HOH HOH . C 3 HOH A 154 754 112 HOH HOH . C 3 HOH A 155 755 147 HOH HOH . C 3 HOH A 156 756 92 HOH HOH . C 3 HOH A 157 757 177 HOH HOH . C 3 HOH A 158 758 47 HOH HOH . C 3 HOH A 159 759 133 HOH HOH . C 3 HOH A 160 760 35 HOH HOH . C 3 HOH A 161 761 232 HOH HOH . C 3 HOH A 162 762 185 HOH HOH . C 3 HOH A 163 763 229 HOH HOH . C 3 HOH A 164 764 111 HOH HOH . C 3 HOH A 165 765 93 HOH HOH . C 3 HOH A 166 766 156 HOH HOH . C 3 HOH A 167 767 159 HOH HOH . C 3 HOH A 168 768 263 HOH HOH . C 3 HOH A 169 769 50 HOH HOH . C 3 HOH A 170 770 52 HOH HOH . C 3 HOH A 171 771 68 HOH HOH . C 3 HOH A 172 772 113 HOH HOH . C 3 HOH A 173 773 162 HOH HOH . C 3 HOH A 174 774 51 HOH HOH . C 3 HOH A 175 775 137 HOH HOH . C 3 HOH A 176 776 193 HOH HOH . C 3 HOH A 177 777 148 HOH HOH . C 3 HOH A 178 778 118 HOH HOH . C 3 HOH A 179 779 223 HOH HOH . C 3 HOH A 180 780 110 HOH HOH . C 3 HOH A 181 781 39 HOH HOH . C 3 HOH A 182 782 117 HOH HOH . C 3 HOH A 183 783 66 HOH HOH . C 3 HOH A 184 784 73 HOH HOH . C 3 HOH A 185 785 104 HOH HOH . C 3 HOH A 186 786 29 HOH HOH . C 3 HOH A 187 787 276 HOH HOH . C 3 HOH A 188 788 182 HOH HOH . C 3 HOH A 189 789 239 HOH HOH . C 3 HOH A 190 790 96 HOH HOH . C 3 HOH A 191 791 82 HOH HOH . C 3 HOH A 192 792 67 HOH HOH . C 3 HOH A 193 793 260 HOH HOH . C 3 HOH A 194 794 246 HOH HOH . C 3 HOH A 195 795 270 HOH HOH . C 3 HOH A 196 796 87 HOH HOH . C 3 HOH A 197 797 181 HOH HOH . C 3 HOH A 198 798 140 HOH HOH . C 3 HOH A 199 799 145 HOH HOH . C 3 HOH A 200 800 102 HOH HOH . C 3 HOH A 201 801 136 HOH HOH . C 3 HOH A 202 802 76 HOH HOH . C 3 HOH A 203 803 275 HOH HOH . C 3 HOH A 204 804 268 HOH HOH . C 3 HOH A 205 805 240 HOH HOH . C 3 HOH A 206 806 173 HOH HOH . C 3 HOH A 207 807 248 HOH HOH . C 3 HOH A 208 808 105 HOH HOH . C 3 HOH A 209 809 202 HOH HOH . C 3 HOH A 210 810 254 HOH HOH . C 3 HOH A 211 811 174 HOH HOH . C 3 HOH A 212 812 132 HOH HOH . C 3 HOH A 213 813 172 HOH HOH . C 3 HOH A 214 814 250 HOH HOH . C 3 HOH A 215 815 152 HOH HOH . C 3 HOH A 216 816 138 HOH HOH . C 3 HOH A 217 817 49 HOH HOH . C 3 HOH A 218 818 242 HOH HOH . C 3 HOH A 219 819 222 HOH HOH . C 3 HOH A 220 820 204 HOH HOH . C 3 HOH A 221 821 251 HOH HOH . C 3 HOH A 222 822 281 HOH HOH . C 3 HOH A 223 823 286 HOH HOH . C 3 HOH A 224 824 253 HOH HOH . C 3 HOH A 225 825 231 HOH HOH . C 3 HOH A 226 826 75 HOH HOH . C 3 HOH A 227 827 180 HOH HOH . C 3 HOH A 228 828 236 HOH HOH . C 3 HOH A 229 829 175 HOH HOH . C 3 HOH A 230 830 283 HOH HOH . C 3 HOH A 231 831 56 HOH HOH . C 3 HOH A 232 832 243 HOH HOH . C 3 HOH A 233 833 30 HOH HOH . C 3 HOH A 234 834 271 HOH HOH . C 3 HOH A 235 835 130 HOH HOH . C 3 HOH A 236 836 164 HOH HOH . C 3 HOH A 237 837 220 HOH HOH . C 3 HOH A 238 838 190 HOH HOH . C 3 HOH A 239 839 228 HOH HOH . C 3 HOH A 240 840 125 HOH HOH . C 3 HOH A 241 841 157 HOH HOH . C 3 HOH A 242 842 203 HOH HOH . C 3 HOH A 243 843 121 HOH HOH . C 3 HOH A 244 844 284 HOH HOH . C 3 HOH A 245 845 88 HOH HOH . C 3 HOH A 246 846 258 HOH HOH . C 3 HOH A 247 847 188 HOH HOH . C 3 HOH A 248 848 219 HOH HOH . C 3 HOH A 249 849 153 HOH HOH . C 3 HOH A 250 850 269 HOH HOH . C 3 HOH A 251 851 237 HOH HOH . C 3 HOH A 252 852 149 HOH HOH . C 3 HOH A 253 853 215 HOH HOH . C 3 HOH A 254 854 218 HOH HOH . C 3 HOH A 255 855 64 HOH HOH . C 3 HOH A 256 856 262 HOH HOH . C 3 HOH A 257 857 158 HOH HOH . C 3 HOH A 258 858 233 HOH HOH . C 3 HOH A 259 859 135 HOH HOH . C 3 HOH A 260 860 198 HOH HOH . C 3 HOH A 261 861 277 HOH HOH . C 3 HOH A 262 862 91 HOH HOH . C 3 HOH A 263 863 205 HOH HOH . C 3 HOH A 264 864 196 HOH HOH . C 3 HOH A 265 865 165 HOH HOH . C 3 HOH A 266 866 226 HOH HOH . C 3 HOH A 267 867 194 HOH HOH . C 3 HOH A 268 868 108 HOH HOH . C 3 HOH A 269 869 221 HOH HOH . C 3 HOH A 270 870 161 HOH HOH . C 3 HOH A 271 871 207 HOH HOH . C 3 HOH A 272 872 259 HOH HOH . C 3 HOH A 273 873 213 HOH HOH . C 3 HOH A 274 874 241 HOH HOH . C 3 HOH A 275 875 131 HOH HOH . C 3 HOH A 276 876 257 HOH HOH . C 3 HOH A 277 877 195 HOH HOH . C 3 HOH A 278 878 124 HOH HOH . C 3 HOH A 279 879 65 HOH HOH . C 3 HOH A 280 880 282 HOH HOH . C 3 HOH A 281 881 189 HOH HOH . C 3 HOH A 282 882 201 HOH HOH . C 3 HOH A 283 883 211 HOH HOH . C 3 HOH A 284 884 155 HOH HOH . C 3 HOH A 285 885 216 HOH HOH . C 3 HOH A 286 886 227 HOH HOH . C 3 HOH A 287 887 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 -43.974 -0.918 -5.053 1 32.81 ? C TRS 500 A 1 HETATM 2 C C1 TRS . . . B 2 -44.782 -0.536 -3.796 1 30.2 ? C1 TRS 500 A 1 HETATM 3 C C2 TRS . . . B 2 -44.865 -0.71 -6.282 1 34.87 ? C2 TRS 500 A 1 HETATM 4 C C3 TRS . . . B 2 -43.604 -2.407 -4.958 1 32.85 ? C3 TRS 500 A 1 HETATM 5 N N TRS . . . B 2 -42.693 0.018 -5.087 1 34.58 ? N TRS 500 A 1 HETATM 6 O O1 TRS . . . B 2 -44.973 0.863 -3.77 1 30.16 ? O1 TRS 500 A 1 HETATM 7 O O2 TRS . . . B 2 -45.88 0.226 -5.994 1 34.43 ? O2 TRS 500 A 1 HETATM 8 O O3 TRS . . . B 2 -42.789 -2.64 -3.831 1 31.75 ? O3 TRS 500 A 1 HETATM 9 H H11 TRS . . . B 2 -44.249 -0.854 -2.901 1 36.31 ? H11 TRS 500 A 1 HETATM 10 H H12 TRS . . . B 2 -45.748 -1.042 -3.808 1 36.31 ? H12 TRS 500 A 1 HETATM 11 H H21 TRS . . . B 2 -45.314 -1.659 -6.576 1 41.92 ? H21 TRS 500 A 1 HETATM 12 H H22 TRS . . . B 2 -44.261 -0.353 -7.117 1 41.92 ? H22 TRS 500 A 1 HETATM 13 H H31 TRS . . . B 2 -43.076 -2.712 -5.862 1 39.49 ? H31 TRS 500 A 1 HETATM 14 H H32 TRS . . . B 2 -44.512 -3.006 -4.883 1 39.49 ? H32 TRS 500 A 1 HETATM 15 H HN1 TRS . . . B 2 -41.971 -0.085 -4.381 1 41.57 ? HN1 TRS 500 A 1 HETATM 16 H HN2 TRS . . . B 2 -42.798 1.025 -5.015 1 41.57 ? HN2 TRS 500 A 1 HETATM 17 H HN3 TRS . . . B 2 -42.081 0.011 -5.897 1 41.57 ? HN3 TRS 500 A 1 HETATM 18 H HO1 TRS . . . B 2 -45.437 1.114 -2.944 1 36.27 ? HO1 TRS 500 A 1 HETATM 19 H HO2 TRS . . . B 2 -46.491 0.292 -6.757 1 41.39 ? HO2 TRS 500 A 1 HETATM 20 H HO3 TRS . . . B 2 -42.528 -1.782 -3.434 1 38.17 ? HO3 TRS 500 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #