data_7H22 # _model_server_result.job_id AxaAOwTqfRhyXVjiHFxFSw _model_server_result.datetime_utc '2024-10-11 02:26:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7h22 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":204}' # _entry.id 7H22 # _exptl.entry_id 7H22 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 225.268 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(3R)-6-oxopiperidin-3-yl]-1,3-thiazole-4-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7H22 _cell.length_a 42.58 _cell.length_b 42.58 _cell.length_c 217.119 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H22 _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 H N N # _chem_comp.formula 'C9 H11 N3 O2 S' _chem_comp.formula_weight 225.268 _chem_comp.id YX6 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(3R)-6-oxopiperidin-3-yl]-1,3-thiazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 S13 YX6 sing 385 n y C12 C11 YX6 doub 386 n y S13 C14 YX6 sing 387 n y O01 C02 YX6 doub 388 n n C11 C02 YX6 sing 389 n n C11 N15 YX6 sing 390 n y C02 N03 YX6 sing 391 n n C14 N15 YX6 doub 392 n y C10 N09 YX6 sing 393 n n C10 C04 YX6 sing 394 n n N09 C07 YX6 sing 395 n n N03 C04 YX6 sing 396 n n C04 C05 YX6 sing 397 n n C07 O08 YX6 doub 398 n n C07 C06 YX6 sing 399 n n C05 C06 YX6 sing 400 n n C10 H1 YX6 sing 401 n n C10 H2 YX6 sing 402 n n N03 H3 YX6 sing 403 n n C04 H4 YX6 sing 404 n n C05 H5 YX6 sing 405 n n C05 H6 YX6 sing 406 n n C06 H7 YX6 sing 407 n n C06 H8 YX6 sing 408 n n N09 H9 YX6 sing 409 n n C12 H10 YX6 sing 410 n n C14 H11 YX6 sing 411 n n # _atom_sites.entry_id 7H22 _atom_sites.fract_transf_matrix[1][1] 0.023485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 YX6 A 1 501 501 YX6 LIG . D 4 DMS A 1 502 502 DMS DMS . E 4 DMS B 1 201 101 DMS DMS . F 4 DMS B 1 202 202 DMS DMS . G 4 DMS B 1 203 203 DMS DMS . H 3 YX6 B 1 204 401 YX6 LIG . I 5 HOH A 1 601 36 HOH HOH . I 5 HOH A 2 602 251 HOH HOH . I 5 HOH A 3 603 233 HOH HOH . I 5 HOH A 4 604 228 HOH HOH . I 5 HOH A 5 605 248 HOH HOH . I 5 HOH A 6 606 38 HOH HOH . I 5 HOH A 7 607 164 HOH HOH . I 5 HOH A 8 608 16 HOH HOH . I 5 HOH A 9 609 150 HOH HOH . I 5 HOH A 10 610 195 HOH HOH . I 5 HOH A 11 611 166 HOH HOH . I 5 HOH A 12 612 158 HOH HOH . I 5 HOH A 13 613 23 HOH HOH . I 5 HOH A 14 614 15 HOH HOH . I 5 HOH A 15 615 250 HOH HOH . I 5 HOH A 16 616 180 HOH HOH . I 5 HOH A 17 617 11 HOH HOH . I 5 HOH A 18 618 146 HOH HOH . I 5 HOH A 19 619 240 HOH HOH . I 5 HOH A 20 620 200 HOH HOH . I 5 HOH A 21 621 253 HOH HOH . I 5 HOH A 22 622 159 HOH HOH . I 5 HOH A 23 623 249 HOH HOH . I 5 HOH A 24 624 179 HOH HOH . I 5 HOH A 25 625 235 HOH HOH . I 5 HOH A 26 626 25 HOH HOH . I 5 HOH A 27 627 157 HOH HOH . I 5 HOH A 28 628 27 HOH HOH . I 5 HOH A 29 629 259 HOH HOH . J 5 HOH B 1 301 258 HOH HOH . J 5 HOH B 2 302 219 HOH HOH . J 5 HOH B 3 303 181 HOH HOH . J 5 HOH B 4 304 141 HOH HOH . J 5 HOH B 5 305 7 HOH HOH . J 5 HOH B 6 306 255 HOH HOH . J 5 HOH B 7 307 230 HOH HOH . J 5 HOH B 8 308 142 HOH HOH . J 5 HOH B 9 309 144 HOH HOH . J 5 HOH B 10 310 222 HOH HOH . J 5 HOH B 11 311 198 HOH HOH . J 5 HOH B 12 312 5 HOH HOH . J 5 HOH B 13 313 14 HOH HOH . J 5 HOH B 14 314 193 HOH HOH . J 5 HOH B 15 315 161 HOH HOH . J 5 HOH B 16 316 31 HOH HOH . J 5 HOH B 17 317 18 HOH HOH . J 5 HOH B 18 318 135 HOH HOH . J 5 HOH B 19 319 132 HOH HOH . J 5 HOH B 20 320 176 HOH HOH . J 5 HOH B 21 321 211 HOH HOH . J 5 HOH B 22 322 188 HOH HOH . J 5 HOH B 23 323 186 HOH HOH . J 5 HOH B 24 324 238 HOH HOH . J 5 HOH B 25 325 21 HOH HOH . J 5 HOH B 26 326 2 HOH HOH . J 5 HOH B 27 327 247 HOH HOH . J 5 HOH B 28 328 13 HOH HOH . J 5 HOH B 29 329 8 HOH HOH . J 5 HOH B 30 330 160 HOH HOH . J 5 HOH B 31 331 202 HOH HOH . J 5 HOH B 32 332 245 HOH HOH . J 5 HOH B 33 333 6 HOH HOH . J 5 HOH B 34 334 131 HOH HOH . J 5 HOH B 35 335 140 HOH HOH . J 5 HOH B 36 336 162 HOH HOH . J 5 HOH B 37 337 134 HOH HOH . J 5 HOH B 38 338 199 HOH HOH . J 5 HOH B 39 339 30 HOH HOH . J 5 HOH B 40 340 165 HOH HOH . J 5 HOH B 41 341 139 HOH HOH . J 5 HOH B 42 342 252 HOH HOH . J 5 HOH B 43 343 224 HOH HOH . J 5 HOH B 44 344 4 HOH HOH . J 5 HOH B 45 345 246 HOH HOH . J 5 HOH B 46 346 9 HOH HOH . J 5 HOH B 47 347 196 HOH HOH . J 5 HOH B 48 348 133 HOH HOH . J 5 HOH B 49 349 169 HOH HOH . J 5 HOH B 50 350 254 HOH HOH . J 5 HOH B 51 351 151 HOH HOH . J 5 HOH B 52 352 237 HOH HOH . J 5 HOH B 53 353 210 HOH HOH . J 5 HOH B 54 354 19 HOH HOH . J 5 HOH B 55 355 153 HOH HOH . J 5 HOH B 56 356 173 HOH HOH . J 5 HOH B 57 357 148 HOH HOH . J 5 HOH B 58 358 194 HOH HOH . J 5 HOH B 59 359 256 HOH HOH . J 5 HOH B 60 360 29 HOH HOH . J 5 HOH B 61 361 143 HOH HOH . J 5 HOH B 62 362 22 HOH HOH . J 5 HOH B 63 363 32 HOH HOH . J 5 HOH B 64 364 197 HOH HOH . J 5 HOH B 65 365 24 HOH HOH . J 5 HOH B 66 366 17 HOH HOH . J 5 HOH B 67 367 192 HOH HOH . J 5 HOH B 68 368 147 HOH HOH . J 5 HOH B 69 369 203 HOH HOH . J 5 HOH B 70 370 33 HOH HOH . J 5 HOH B 71 371 156 HOH HOH . J 5 HOH B 72 372 191 HOH HOH . J 5 HOH B 73 373 242 HOH HOH . J 5 HOH B 74 374 178 HOH HOH . J 5 HOH B 75 375 217 HOH HOH . J 5 HOH B 76 376 209 HOH HOH . J 5 HOH B 77 377 10 HOH HOH . J 5 HOH B 78 378 26 HOH HOH . J 5 HOH B 79 379 189 HOH HOH . J 5 HOH B 80 380 257 HOH HOH . J 5 HOH B 81 381 239 HOH HOH . J 5 HOH B 82 382 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 YX6 . . . H 3 -8.761 5.416 -16.506 0.8 80.79 ? C10 YX6 204 B 1 HETATM 2 O O01 YX6 . . . H 3 -5.784 5.943 -15.261 0.8 84.08 ? O01 YX6 204 B 1 HETATM 3 C C02 YX6 . . . H 3 -5.638 6.063 -16.48 0.8 83.79 ? C02 YX6 204 B 1 HETATM 4 N N03 YX6 . . . H 3 -6.648 6.287 -17.328 0.8 82.51 ? N03 YX6 204 B 1 HETATM 5 C C04 YX6 . . . H 3 -7.69 5.295 -17.577 0.8 81.27 ? C04 YX6 204 B 1 HETATM 6 C C05 YX6 . . . H 3 -8.282 5.485 -18.968 0.8 80.63 ? C05 YX6 204 B 1 HETATM 7 C C06 YX6 . . . H 3 -9.543 4.663 -19.25 0.8 80.16 ? C06 YX6 204 B 1 HETATM 8 C C07 YX6 . . . H 3 -10.468 4.553 -18.076 0.8 79.88 ? C07 YX6 204 B 1 HETATM 9 O O08 YX6 . . . H 3 -11.671 4.412 -18.245 0.8 79.61 ? O08 YX6 204 B 1 HETATM 10 N N09 YX6 . . . H 3 -9.96 4.661 -16.86 0.8 80.38 ? N09 YX6 204 B 1 HETATM 11 C C11 YX6 . . . H 3 -4.307 5.943 -17.119 0.8 84.62 ? C11 YX6 204 B 1 HETATM 12 C C12 YX6 . . . H 3 -3.141 6.273 -16.514 0.8 85.07 ? C12 YX6 204 B 1 HETATM 13 S S13 YX6 . . . H 3 -1.834 6.008 -17.571 0.8 85.49 ? S13 YX6 204 B 1 HETATM 14 C C14 YX6 . . . H 3 -2.934 5.466 -18.761 0.8 85.28 ? C14 YX6 204 B 1 HETATM 15 N N15 YX6 . . . H 3 -4.188 5.475 -18.418 0.8 85.03 ? N15 YX6 204 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #