data_7H2I # _model_server_result.job_id G8qBStz7_izwjLVntbODhg _model_server_result.datetime_utc '2024-11-16 16:03:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7h2i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 7H2I # _exptl.entry_id 7H2I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 239.273 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{[(1H-benzimidazol-2-yl)amino]methyl}phenol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7H2I _cell.length_a 42.503 _cell.length_b 42.503 _cell.length_c 217.147 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H2I _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _chem_comp.formula 'C14 H13 N3 O' _chem_comp.formula_weight 239.273 _chem_comp.id T1J _chem_comp.mon_nstd_flag . _chem_comp.name 2-{[(1H-benzimidazol-2-yl)amino]methyl}phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 O01 T1J sing 299 n n C03 C02 T1J doub 300 n y C04 C03 T1J sing 301 n y C05 C04 T1J doub 302 n y C06 C05 T1J sing 303 n y C07 C06 T1J doub 304 n y C08 C07 T1J sing 305 n n N09 C08 T1J sing 306 n n C10 N09 T1J sing 307 n n N11 C10 T1J doub 308 n y C12 N11 T1J sing 309 n y C13 C12 T1J doub 310 n y C14 C13 T1J sing 311 n y C15 C14 T1J doub 312 n y C16 C15 T1J sing 313 n y C17 C16 T1J doub 314 n y N18 C17 T1J sing 315 n y C02 C07 T1J sing 316 n y C10 N18 T1J sing 317 n y C12 C17 T1J sing 318 n y C13 H131 T1J sing 319 n n C15 H151 T1J sing 320 n n C03 H031 T1J sing 321 n n C04 H041 T1J sing 322 n n C05 H051 T1J sing 323 n n C06 H061 T1J sing 324 n n C08 H081 T1J sing 325 n n C08 H082 T1J sing 326 n n C14 H141 T1J sing 327 n n C16 H161 T1J sing 328 n n N09 H091 T1J sing 329 n n N18 H181 T1J sing 330 n n O01 H011 T1J sing 331 n n # _atom_sites.entry_id 7H2I _atom_sites.fract_transf_matrix[1][1] 0.023528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023528 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004605 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMS B 1 201 201 DMS DMS . D 3 DMS B 1 202 202 DMS DMS . E 4 T1J B 1 203 301 T1J LIG . F 4 T1J B 1 204 401 T1J LIG . G 3 DMS B 1 205 402 DMS DMS . H 3 DMS B 1 206 403 DMS DMS . I 5 HOH A 1 101 176 HOH HOH . I 5 HOH A 2 102 121 HOH HOH . I 5 HOH A 3 103 198 HOH HOH . I 5 HOH A 4 104 48 HOH HOH . I 5 HOH A 5 105 98 HOH HOH . I 5 HOH A 6 106 65 HOH HOH . I 5 HOH A 7 107 162 HOH HOH . I 5 HOH A 8 108 168 HOH HOH . I 5 HOH A 9 109 194 HOH HOH . I 5 HOH A 10 110 165 HOH HOH . I 5 HOH A 11 111 187 HOH HOH . I 5 HOH A 12 112 178 HOH HOH . I 5 HOH A 13 113 118 HOH HOH . I 5 HOH A 14 114 16 HOH HOH . I 5 HOH A 15 115 157 HOH HOH . I 5 HOH A 16 116 36 HOH HOH . I 5 HOH A 17 117 28 HOH HOH . I 5 HOH A 18 118 49 HOH HOH . I 5 HOH A 19 119 34 HOH HOH . I 5 HOH A 20 120 203 HOH HOH . I 5 HOH A 21 121 142 HOH HOH . I 5 HOH A 22 122 145 HOH HOH . I 5 HOH A 23 123 186 HOH HOH . I 5 HOH A 24 124 20 HOH HOH . I 5 HOH A 25 125 163 HOH HOH . I 5 HOH A 26 126 160 HOH HOH . I 5 HOH A 27 127 196 HOH HOH . I 5 HOH A 28 128 151 HOH HOH . I 5 HOH A 29 129 120 HOH HOH . I 5 HOH A 30 130 29 HOH HOH . I 5 HOH A 31 131 50 HOH HOH . I 5 HOH A 32 132 119 HOH HOH . I 5 HOH A 33 133 110 HOH HOH . I 5 HOH A 34 134 105 HOH HOH . I 5 HOH A 35 135 40 HOH HOH . I 5 HOH A 36 136 150 HOH HOH . I 5 HOH A 37 137 27 HOH HOH . I 5 HOH A 38 138 87 HOH HOH . I 5 HOH A 39 139 171 HOH HOH . J 5 HOH B 1 301 51 HOH HOH . J 5 HOH B 2 302 89 HOH HOH . J 5 HOH B 3 303 158 HOH HOH . J 5 HOH B 4 304 11 HOH HOH . J 5 HOH B 5 305 161 HOH HOH . J 5 HOH B 6 306 143 HOH HOH . J 5 HOH B 7 307 147 HOH HOH . J 5 HOH B 8 308 170 HOH HOH . J 5 HOH B 9 309 39 HOH HOH . J 5 HOH B 10 310 69 HOH HOH . J 5 HOH B 11 311 54 HOH HOH . J 5 HOH B 12 312 9 HOH HOH . J 5 HOH B 13 313 68 HOH HOH . J 5 HOH B 14 314 100 HOH HOH . J 5 HOH B 15 315 195 HOH HOH . J 5 HOH B 16 316 24 HOH HOH . J 5 HOH B 17 317 4 HOH HOH . J 5 HOH B 18 318 154 HOH HOH . J 5 HOH B 19 319 149 HOH HOH . J 5 HOH B 20 320 108 HOH HOH . J 5 HOH B 21 321 197 HOH HOH . J 5 HOH B 22 322 63 HOH HOH . J 5 HOH B 23 323 106 HOH HOH . J 5 HOH B 24 324 56 HOH HOH . J 5 HOH B 25 325 13 HOH HOH . J 5 HOH B 26 326 14 HOH HOH . J 5 HOH B 27 327 81 HOH HOH . J 5 HOH B 28 328 175 HOH HOH . J 5 HOH B 29 329 159 HOH HOH . J 5 HOH B 30 330 141 HOH HOH . J 5 HOH B 31 331 1 HOH HOH . J 5 HOH B 32 332 72 HOH HOH . J 5 HOH B 33 333 174 HOH HOH . J 5 HOH B 34 334 169 HOH HOH . J 5 HOH B 35 335 2 HOH HOH . J 5 HOH B 36 336 192 HOH HOH . J 5 HOH B 37 337 146 HOH HOH . J 5 HOH B 38 338 191 HOH HOH . J 5 HOH B 39 339 66 HOH HOH . J 5 HOH B 40 340 42 HOH HOH . J 5 HOH B 41 341 122 HOH HOH . J 5 HOH B 42 342 46 HOH HOH . J 5 HOH B 43 343 31 HOH HOH . J 5 HOH B 44 344 60 HOH HOH . J 5 HOH B 45 345 10 HOH HOH . J 5 HOH B 46 346 12 HOH HOH . J 5 HOH B 47 347 193 HOH HOH . J 5 HOH B 48 348 58 HOH HOH . J 5 HOH B 49 349 117 HOH HOH . J 5 HOH B 50 350 5 HOH HOH . J 5 HOH B 51 351 156 HOH HOH . J 5 HOH B 52 352 90 HOH HOH . J 5 HOH B 53 353 172 HOH HOH . J 5 HOH B 54 354 185 HOH HOH . J 5 HOH B 55 355 94 HOH HOH . J 5 HOH B 56 356 80 HOH HOH . J 5 HOH B 57 357 21 HOH HOH . J 5 HOH B 58 358 116 HOH HOH . J 5 HOH B 59 359 30 HOH HOH . J 5 HOH B 60 360 32 HOH HOH . J 5 HOH B 61 361 112 HOH HOH . J 5 HOH B 62 362 202 HOH HOH . J 5 HOH B 63 363 43 HOH HOH . J 5 HOH B 64 364 23 HOH HOH . J 5 HOH B 65 365 180 HOH HOH . J 5 HOH B 66 366 182 HOH HOH . J 5 HOH B 67 367 164 HOH HOH . J 5 HOH B 68 368 144 HOH HOH . J 5 HOH B 69 369 79 HOH HOH . J 5 HOH B 70 370 92 HOH HOH . J 5 HOH B 71 371 166 HOH HOH . J 5 HOH B 72 372 115 HOH HOH . J 5 HOH B 73 373 62 HOH HOH . J 5 HOH B 74 374 35 HOH HOH . J 5 HOH B 75 375 148 HOH HOH . J 5 HOH B 76 376 167 HOH HOH . J 5 HOH B 77 377 155 HOH HOH . J 5 HOH B 78 378 189 HOH HOH . J 5 HOH B 79 379 18 HOH HOH . J 5 HOH B 80 380 183 HOH HOH . J 5 HOH B 81 381 179 HOH HOH . J 5 HOH B 82 382 200 HOH HOH . J 5 HOH B 83 383 77 HOH HOH . J 5 HOH B 84 384 82 HOH HOH . J 5 HOH B 85 385 67 HOH HOH . J 5 HOH B 86 386 3 HOH HOH . J 5 HOH B 87 387 107 HOH HOH . J 5 HOH B 88 388 61 HOH HOH . J 5 HOH B 89 389 184 HOH HOH . J 5 HOH B 90 390 102 HOH HOH . J 5 HOH B 91 391 201 HOH HOH . J 5 HOH B 92 392 64 HOH HOH . J 5 HOH B 93 393 152 HOH HOH . J 5 HOH B 94 394 153 HOH HOH . J 5 HOH B 95 395 17 HOH HOH . J 5 HOH B 96 396 181 HOH HOH . J 5 HOH B 97 397 188 HOH HOH . J 5 HOH B 98 398 177 HOH HOH . J 5 HOH B 99 399 190 HOH HOH . J 5 HOH B 100 400 26 HOH HOH . J 5 HOH B 101 401 199 HOH HOH . J 5 HOH B 102 402 173 HOH HOH . J 5 HOH B 103 403 44 HOH HOH . J 5 HOH B 104 404 59 HOH HOH . J 5 HOH B 105 405 109 HOH HOH . J 5 HOH B 106 406 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 T1J . . . F 4 -7.314 9.495 -26.478 1 137.11 ? C10 T1J 204 B 1 HETATM 2 C C13 T1J . . . F 4 -9.276 7.171 -28.345 1 137.15 ? C13 T1J 204 B 1 HETATM 3 C C15 T1J . . . F 4 -11.372 8.324 -28.01 1 137 ? C15 T1J 204 B 1 HETATM 4 C C17 T1J . . . F 4 -9.363 9.26 -27.106 1 137.04 ? C17 T1J 204 B 1 HETATM 5 C C02 T1J . . . F 4 -6.051 8.132 -23.581 1 137.11 ? C02 T1J 204 B 1 HETATM 6 C C03 T1J . . . F 4 -5.669 7.233 -22.592 1 137.15 ? C03 T1J 204 B 1 HETATM 7 C C04 T1J . . . F 4 -4.95 7.673 -21.496 1 137.2 ? C04 T1J 204 B 1 HETATM 8 C C05 T1J . . . F 4 -4.61 8.999 -21.383 1 137.24 ? C05 T1J 204 B 1 HETATM 9 C C06 T1J . . . F 4 -4.993 9.901 -22.361 1 137.26 ? C06 T1J 204 B 1 HETATM 10 C C07 T1J . . . F 4 -5.722 9.486 -23.473 1 137.19 ? C07 T1J 204 B 1 HETATM 11 C C08 T1J . . . F 4 -6.17 10.469 -24.529 1 137.19 ? C08 T1J 204 B 1 HETATM 12 C C12 T1J . . . F 4 -8.653 8.178 -27.622 1 137.1 ? C12 T1J 204 B 1 HETATM 13 C C14 T1J . . . F 4 -10.648 7.26 -28.535 1 137.13 ? C14 T1J 204 B 1 HETATM 14 C C16 T1J . . . F 4 -10.74 9.338 -27.303 1 136.98 ? C16 T1J 204 B 1 HETATM 15 N N09 T1J . . . F 4 -6.194 9.906 -25.872 1 137.15 ? N09 T1J 204 B 1 HETATM 16 N N11 T1J . . . F 4 -7.346 8.358 -27.21 1 137.1 ? N11 T1J 204 B 1 HETATM 17 N N18 T1J . . . F 4 -8.495 10.088 -26.393 1 137.07 ? N18 T1J 204 B 1 HETATM 18 O O01 T1J . . . F 4 -6.734 7.685 -24.664 1 137.07 ? O01 T1J 204 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 18 #