data_7H2L # _model_server_result.job_id Ds3esMxseOcjcIobZwxYcA _model_server_result.datetime_utc '2024-10-11 20:25:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7h2l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7H2L # _exptl.entry_id 7H2L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7H2L _cell.length_a 42.441 _cell.length_b 42.441 _cell.length_c 217.401 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H2L _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7H2L _atom_sites.fract_transf_matrix[1][1] 0.023562 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMS B 1 201 202 DMS DMS . D 3 DMS B 1 202 203 DMS DMS . E 4 TT3 B 1 203 301 TT3 LIG . F 5 HOH A 1 101 34 HOH HOH . F 5 HOH A 2 102 105 HOH HOH . F 5 HOH A 3 103 83 HOH HOH . F 5 HOH A 4 104 129 HOH HOH . F 5 HOH A 5 105 48 HOH HOH . F 5 HOH A 6 106 66 HOH HOH . F 5 HOH A 7 107 35 HOH HOH . F 5 HOH A 8 108 85 HOH HOH . F 5 HOH A 9 109 80 HOH HOH . F 5 HOH A 10 110 95 HOH HOH . F 5 HOH A 11 111 145 HOH HOH . F 5 HOH A 12 112 21 HOH HOH . F 5 HOH A 13 113 26 HOH HOH . F 5 HOH A 14 114 79 HOH HOH . F 5 HOH A 15 115 12 HOH HOH . F 5 HOH A 16 116 125 HOH HOH . F 5 HOH A 17 117 53 HOH HOH . F 5 HOH A 18 118 28 HOH HOH . F 5 HOH A 19 119 36 HOH HOH . F 5 HOH A 20 120 96 HOH HOH . F 5 HOH A 21 121 108 HOH HOH . F 5 HOH A 22 122 15 HOH HOH . F 5 HOH A 23 123 119 HOH HOH . F 5 HOH A 24 124 82 HOH HOH . F 5 HOH A 25 125 107 HOH HOH . F 5 HOH A 26 126 99 HOH HOH . F 5 HOH A 27 127 97 HOH HOH . F 5 HOH A 28 128 22 HOH HOH . F 5 HOH A 29 129 124 HOH HOH . F 5 HOH A 30 130 70 HOH HOH . F 5 HOH A 31 131 75 HOH HOH . F 5 HOH A 32 132 140 HOH HOH . F 5 HOH A 33 133 81 HOH HOH . F 5 HOH A 34 134 106 HOH HOH . F 5 HOH A 35 135 20 HOH HOH . F 5 HOH A 36 136 121 HOH HOH . G 5 HOH B 1 301 8 HOH HOH . G 5 HOH B 2 302 94 HOH HOH . G 5 HOH B 3 303 37 HOH HOH . G 5 HOH B 4 304 101 HOH HOH . G 5 HOH B 5 305 62 HOH HOH . G 5 HOH B 6 306 109 HOH HOH . G 5 HOH B 7 307 38 HOH HOH . G 5 HOH B 8 308 6 HOH HOH . G 5 HOH B 9 309 93 HOH HOH . G 5 HOH B 10 310 110 HOH HOH . G 5 HOH B 11 311 18 HOH HOH . G 5 HOH B 12 312 123 HOH HOH . G 5 HOH B 13 313 104 HOH HOH . G 5 HOH B 14 314 88 HOH HOH . G 5 HOH B 15 315 137 HOH HOH . G 5 HOH B 16 316 52 HOH HOH . G 5 HOH B 17 317 39 HOH HOH . G 5 HOH B 18 318 114 HOH HOH . G 5 HOH B 19 319 5 HOH HOH . G 5 HOH B 20 320 4 HOH HOH . G 5 HOH B 21 321 71 HOH HOH . G 5 HOH B 22 322 90 HOH HOH . G 5 HOH B 23 323 2 HOH HOH . G 5 HOH B 24 324 58 HOH HOH . G 5 HOH B 25 325 51 HOH HOH . G 5 HOH B 26 326 136 HOH HOH . G 5 HOH B 27 327 130 HOH HOH . G 5 HOH B 28 328 49 HOH HOH . G 5 HOH B 29 329 29 HOH HOH . G 5 HOH B 30 330 11 HOH HOH . G 5 HOH B 31 331 67 HOH HOH . G 5 HOH B 32 332 1 HOH HOH . G 5 HOH B 33 333 10 HOH HOH . G 5 HOH B 34 334 46 HOH HOH . G 5 HOH B 35 335 113 HOH HOH . G 5 HOH B 36 336 84 HOH HOH . G 5 HOH B 37 337 41 HOH HOH . G 5 HOH B 38 338 55 HOH HOH . G 5 HOH B 39 339 111 HOH HOH . G 5 HOH B 40 340 7 HOH HOH . G 5 HOH B 41 341 9 HOH HOH . G 5 HOH B 42 342 54 HOH HOH . G 5 HOH B 43 343 33 HOH HOH . G 5 HOH B 44 344 73 HOH HOH . G 5 HOH B 45 345 25 HOH HOH . G 5 HOH B 46 346 77 HOH HOH . G 5 HOH B 47 347 30 HOH HOH . G 5 HOH B 48 348 24 HOH HOH . G 5 HOH B 49 349 115 HOH HOH . G 5 HOH B 50 350 27 HOH HOH . G 5 HOH B 51 351 86 HOH HOH . G 5 HOH B 52 352 23 HOH HOH . G 5 HOH B 53 353 64 HOH HOH . G 5 HOH B 54 354 16 HOH HOH . G 5 HOH B 55 355 118 HOH HOH . G 5 HOH B 56 356 17 HOH HOH . G 5 HOH B 57 357 100 HOH HOH . G 5 HOH B 58 358 78 HOH HOH . G 5 HOH B 59 359 14 HOH HOH . G 5 HOH B 60 360 87 HOH HOH . G 5 HOH B 61 361 127 HOH HOH . G 5 HOH B 62 362 102 HOH HOH . G 5 HOH B 63 363 92 HOH HOH . G 5 HOH B 64 364 65 HOH HOH . G 5 HOH B 65 365 63 HOH HOH . G 5 HOH B 66 366 138 HOH HOH . G 5 HOH B 67 367 69 HOH HOH . G 5 HOH B 68 368 112 HOH HOH . G 5 HOH B 69 369 45 HOH HOH . G 5 HOH B 70 370 144 HOH HOH . G 5 HOH B 71 371 98 HOH HOH . G 5 HOH B 72 372 3 HOH HOH . G 5 HOH B 73 373 57 HOH HOH . G 5 HOH B 74 374 43 HOH HOH . G 5 HOH B 75 375 68 HOH HOH . G 5 HOH B 76 376 146 HOH HOH . G 5 HOH B 77 377 120 HOH HOH . G 5 HOH B 78 378 59 HOH HOH . G 5 HOH B 79 379 89 HOH HOH . G 5 HOH B 80 380 117 HOH HOH . G 5 HOH B 81 381 31 HOH HOH . G 5 HOH B 82 382 91 HOH HOH . G 5 HOH B 83 383 143 HOH HOH . G 5 HOH B 84 384 50 HOH HOH . G 5 HOH B 85 385 47 HOH HOH . G 5 HOH B 86 386 139 HOH HOH . G 5 HOH B 87 387 126 HOH HOH . G 5 HOH B 88 388 103 HOH HOH . G 5 HOH B 89 389 116 HOH HOH . G 5 HOH B 90 390 131 HOH HOH . G 5 HOH B 91 391 13 HOH HOH . G 5 HOH B 92 392 44 HOH HOH . G 5 HOH B 93 393 61 HOH HOH . G 5 HOH B 94 394 76 HOH HOH . G 5 HOH B 95 395 142 HOH HOH . G 5 HOH B 96 396 19 HOH HOH . G 5 HOH B 97 397 122 HOH HOH . G 5 HOH B 98 398 32 HOH HOH . G 5 HOH B 99 399 141 HOH HOH . G 5 HOH B 100 400 42 HOH HOH . G 5 HOH B 101 401 56 HOH HOH . G 5 HOH B 102 402 72 HOH HOH . G 5 HOH B 103 403 74 HOH HOH . G 5 HOH B 104 404 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 -9.078 2.963 -8.9 1 103.46 ? S DMS 202 B 1 HETATM 2 O O DMS . . . D 3 -9.158 3.932 -7.751 1 103.41 ? O DMS 202 B 1 HETATM 3 C C1 DMS . . . D 3 -9.876 3.737 -10.33 1 103.54 ? C1 DMS 202 B 1 HETATM 4 C C2 DMS . . . D 3 -7.449 3.172 -9.673 1 103.57 ? C2 DMS 202 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #