data_7H2Q # _model_server_result.job_id y8nWO4vCbiwzcvQlVGAtsw _model_server_result.datetime_utc '2024-11-26 02:15:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7h2q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 7H2Q # _exptl.entry_id 7H2Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 157.213 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,N-dimethylpiperazine-1-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7H2Q _cell.length_a 42.38 _cell.length_b 42.38 _cell.length_c 216.378 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H2Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C7 H15 N3 O' _chem_comp.formula_weight 157.213 _chem_comp.id A1AKB _chem_comp.mon_nstd_flag . _chem_comp.name N,N-dimethylpiperazine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N A1AKB sing 1 n n C1 N A1AKB sing 2 n n N C2 A1AKB sing 3 n n C2 O A1AKB doub 4 n n N1 C2 A1AKB sing 5 n n N1 C3 A1AKB sing 6 n n C3 C4 A1AKB sing 7 n n C4 N2 A1AKB sing 8 n n N2 C5 A1AKB sing 9 n n C5 C6 A1AKB sing 10 n n C6 N1 A1AKB sing 11 n n C4 H9 A1AKB sing 12 n n C4 H8 A1AKB sing 13 n n C5 H12 A1AKB sing 14 n n C5 H11 A1AKB sing 15 n n C6 H14 A1AKB sing 16 n n C6 H13 A1AKB sing 17 n n C1 H3 A1AKB sing 18 n n C1 H4 A1AKB sing 19 n n C1 H5 A1AKB sing 20 n n C H2 A1AKB sing 21 n n C H1 A1AKB sing 22 n n C H A1AKB sing 23 n n N2 H15 A1AKB sing 24 n n C3 H7 A1AKB sing 25 n n C3 H6 A1AKB sing 26 n n # _atom_sites.entry_id 7H2Q _atom_sites.fract_transf_matrix[1][1] 0.023596 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004622 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMS B 1 201 202 DMS DMS . D 4 A1AKB B 1 202 301 A1AKB LIG . E 4 A1AKB B 1 203 302 A1AKB LIG . F 5 HOH A 1 101 30 HOH HOH . F 5 HOH A 2 102 71 HOH HOH . F 5 HOH A 3 103 110 HOH HOH . F 5 HOH A 4 104 24 HOH HOH . F 5 HOH A 5 105 42 HOH HOH . F 5 HOH A 6 106 11 HOH HOH . F 5 HOH A 7 107 20 HOH HOH . F 5 HOH A 8 108 120 HOH HOH . F 5 HOH A 9 109 91 HOH HOH . F 5 HOH A 10 110 68 HOH HOH . F 5 HOH A 11 111 104 HOH HOH . F 5 HOH A 12 112 89 HOH HOH . F 5 HOH A 13 113 32 HOH HOH . F 5 HOH A 14 114 64 HOH HOH . F 5 HOH A 15 115 14 HOH HOH . F 5 HOH A 16 116 98 HOH HOH . F 5 HOH A 17 117 59 HOH HOH . F 5 HOH A 18 118 88 HOH HOH . F 5 HOH A 19 119 87 HOH HOH . F 5 HOH A 20 120 70 HOH HOH . F 5 HOH A 21 121 123 HOH HOH . F 5 HOH A 22 122 21 HOH HOH . F 5 HOH A 23 123 117 HOH HOH . F 5 HOH A 24 124 69 HOH HOH . F 5 HOH A 25 125 99 HOH HOH . F 5 HOH A 26 126 107 HOH HOH . F 5 HOH A 27 127 94 HOH HOH . F 5 HOH A 28 128 114 HOH HOH . F 5 HOH A 29 129 81 HOH HOH . F 5 HOH A 30 130 31 HOH HOH . F 5 HOH A 31 131 100 HOH HOH . F 5 HOH A 32 132 51 HOH HOH . F 5 HOH A 33 133 80 HOH HOH . G 5 HOH B 1 301 33 HOH HOH . G 5 HOH B 2 302 53 HOH HOH . G 5 HOH B 3 303 92 HOH HOH . G 5 HOH B 4 304 8 HOH HOH . G 5 HOH B 5 305 111 HOH HOH . G 5 HOH B 6 306 49 HOH HOH . G 5 HOH B 7 307 126 HOH HOH . G 5 HOH B 8 308 6 HOH HOH . G 5 HOH B 9 309 17 HOH HOH . G 5 HOH B 10 310 125 HOH HOH . G 5 HOH B 11 311 85 HOH HOH . G 5 HOH B 12 312 35 HOH HOH . G 5 HOH B 13 313 29 HOH HOH . G 5 HOH B 14 314 122 HOH HOH . G 5 HOH B 15 315 118 HOH HOH . G 5 HOH B 16 316 5 HOH HOH . G 5 HOH B 17 317 56 HOH HOH . G 5 HOH B 18 318 86 HOH HOH . G 5 HOH B 19 319 23 HOH HOH . G 5 HOH B 20 320 10 HOH HOH . G 5 HOH B 21 321 44 HOH HOH . G 5 HOH B 22 322 50 HOH HOH . G 5 HOH B 23 323 4 HOH HOH . G 5 HOH B 24 324 95 HOH HOH . G 5 HOH B 25 325 97 HOH HOH . G 5 HOH B 26 326 36 HOH HOH . G 5 HOH B 27 327 67 HOH HOH . G 5 HOH B 28 328 2 HOH HOH . G 5 HOH B 29 329 54 HOH HOH . G 5 HOH B 30 330 127 HOH HOH . G 5 HOH B 31 331 40 HOH HOH . G 5 HOH B 32 332 83 HOH HOH . G 5 HOH B 33 333 119 HOH HOH . G 5 HOH B 34 334 7 HOH HOH . G 5 HOH B 35 335 65 HOH HOH . G 5 HOH B 36 336 22 HOH HOH . G 5 HOH B 37 337 1 HOH HOH . G 5 HOH B 38 338 26 HOH HOH . G 5 HOH B 39 339 55 HOH HOH . G 5 HOH B 40 340 115 HOH HOH . G 5 HOH B 41 341 16 HOH HOH . G 5 HOH B 42 342 13 HOH HOH . G 5 HOH B 43 343 25 HOH HOH . G 5 HOH B 44 344 84 HOH HOH . G 5 HOH B 45 345 15 HOH HOH . G 5 HOH B 46 346 45 HOH HOH . G 5 HOH B 47 347 58 HOH HOH . G 5 HOH B 48 348 66 HOH HOH . G 5 HOH B 49 349 108 HOH HOH . G 5 HOH B 50 350 102 HOH HOH . G 5 HOH B 51 351 105 HOH HOH . G 5 HOH B 52 352 90 HOH HOH . G 5 HOH B 53 353 3 HOH HOH . G 5 HOH B 54 354 72 HOH HOH . G 5 HOH B 55 355 9 HOH HOH . G 5 HOH B 56 356 103 HOH HOH . G 5 HOH B 57 357 19 HOH HOH . G 5 HOH B 58 358 39 HOH HOH . G 5 HOH B 59 359 27 HOH HOH . G 5 HOH B 60 360 41 HOH HOH . G 5 HOH B 61 361 46 HOH HOH . G 5 HOH B 62 362 62 HOH HOH . G 5 HOH B 63 363 124 HOH HOH . G 5 HOH B 64 364 96 HOH HOH . G 5 HOH B 65 365 93 HOH HOH . G 5 HOH B 66 366 57 HOH HOH . G 5 HOH B 67 367 43 HOH HOH . G 5 HOH B 68 368 113 HOH HOH . G 5 HOH B 69 369 61 HOH HOH . G 5 HOH B 70 370 82 HOH HOH . G 5 HOH B 71 371 121 HOH HOH . G 5 HOH B 72 372 60 HOH HOH . G 5 HOH B 73 373 109 HOH HOH . G 5 HOH B 74 374 12 HOH HOH . G 5 HOH B 75 375 48 HOH HOH . G 5 HOH B 76 376 116 HOH HOH . G 5 HOH B 77 377 18 HOH HOH . G 5 HOH B 78 378 52 HOH HOH . G 5 HOH B 79 379 28 HOH HOH . G 5 HOH B 80 380 38 HOH HOH . G 5 HOH B 81 381 106 HOH HOH . G 5 HOH B 82 382 34 HOH HOH . G 5 HOH B 83 383 76 HOH HOH . G 5 HOH B 84 384 101 HOH HOH . G 5 HOH B 85 385 74 HOH HOH . G 5 HOH B 86 386 37 HOH HOH . G 5 HOH B 87 387 112 HOH HOH . G 5 HOH B 88 388 63 HOH HOH . G 5 HOH B 89 389 79 HOH HOH . G 5 HOH B 90 390 73 HOH HOH . G 5 HOH B 91 391 75 HOH HOH . G 5 HOH B 92 392 47 HOH HOH . G 5 HOH B 93 393 77 HOH HOH . G 5 HOH B 94 394 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1AKB . . . E 4 -5.913 0.696 -28.512 1 114.11 ? N1 A1AKB 203 B 1 HETATM 2 C C4 A1AKB . . . E 4 -5.423 -1.21 -29.998 1 114.01 ? C4 A1AKB 203 B 1 HETATM 3 C C5 A1AKB . . . E 4 -4.755 -1.316 -27.644 1 113.97 ? C5 A1AKB 203 B 1 HETATM 4 C C6 A1AKB . . . E 4 -5.193 0.113 -27.371 1 114 ? C6 A1AKB 203 B 1 HETATM 5 O O A1AKB . . . E 4 -5.921 2.833 -27.792 1 114.22 ? O A1AKB 203 B 1 HETATM 6 C C2 A1AKB . . . E 4 -6.479 1.92 -28.374 1 114.11 ? C2 A1AKB 203 B 1 HETATM 7 N N A1AKB . . . E 4 -7.7 2.075 -28.942 1 113.94 ? N A1AKB 203 B 1 HETATM 8 C C1 A1AKB . . . E 4 -7.962 3.112 -29.933 1 113.88 ? C1 A1AKB 203 B 1 HETATM 9 C C A1AKB . . . E 4 -8.842 1.232 -28.609 1 113.88 ? C A1AKB 203 B 1 HETATM 10 N N2 A1AKB . . . E 4 -5.574 -1.929 -28.708 1 113.98 ? N2 A1AKB 203 B 1 HETATM 11 C C3 A1AKB . . . E 4 -5.371 0.3 -29.82 1 114.13 ? C3 A1AKB 203 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 11 #