data_7H2T # _model_server_result.job_id '_jxqeuT2yLL8S6ciy89JNA' _model_server_result.datetime_utc '2024-11-27 08:07:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7h2t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7H2T # _exptl.entry_id 7H2T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 234.251 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 4-(2-phenoxyethanoyl)piperazin-2-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.94 _cell.angle_gamma 90 _cell.entry_id 7H2T _cell.length_a 85.798 _cell.length_b 56.951 _cell.length_c 32.359 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H2T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 56 A CYS 56 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc2 A SG CYS 58 A CYS 58 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc3 A SG CYS 116 A CYS 116 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc4 A ND1 HIS 118 A HIS 118 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'C12 H14 N2 O3' _chem_comp.formula_weight 234.251 _chem_comp.id TEH _chem_comp.mon_nstd_flag . _chem_comp.name 4-(2-phenoxyethanoyl)piperazin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C03 C02 TEH doub 303 n y C03 C04 TEH sing 304 n y C02 C01 TEH sing 305 n y O07 C04 TEH sing 306 n n O07 C08 TEH sing 307 n n C04 C05 TEH doub 308 n y O10 C09 TEH doub 309 n n O16 C15 TEH doub 310 n n C01 C06 TEH doub 311 n y C09 C08 TEH sing 312 n n C09 N11 TEH sing 313 n n C15 N14 TEH sing 314 n n C15 C17 TEH sing 315 n n C12 N11 TEH sing 316 n n C12 C13 TEH sing 317 n n N11 C17 TEH sing 318 n n N14 C13 TEH sing 319 n n C05 C06 TEH sing 320 n y C13 H1 TEH sing 321 n n C13 H2 TEH sing 322 n n C17 H3 TEH sing 323 n n C17 H4 TEH sing 324 n n C01 H5 TEH sing 325 n n C02 H6 TEH sing 326 n n C03 H7 TEH sing 327 n n C05 H8 TEH sing 328 n n C06 H9 TEH sing 329 n n C08 H10 TEH sing 330 n n C08 H11 TEH sing 331 n n C12 H12 TEH sing 332 n n C12 H13 TEH sing 333 n n N14 H14 TEH sing 334 n n # _atom_sites.entry_id 7H2T _atom_sites.fract_transf_matrix[1][1] 0.011655 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001008 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017559 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031019 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TEH A 1 201 147 TEH LIG . C 2 TEH A 1 202 201 TEH LIG . D 3 ZN A 1 203 1 ZN ZN . E 4 DMS A 1 204 -1 DMS DMS . F 4 DMS A 1 205 0 DMS DMS . G 4 DMS A 1 206 3 DMS DMS . H 5 SO4 A 1 207 1 SO4 SO4 . I 6 HOH A 1 301 49 HOH HOH . I 6 HOH A 2 302 227 HOH HOH . I 6 HOH A 3 303 183 HOH HOH . I 6 HOH A 4 304 131 HOH HOH . I 6 HOH A 5 305 234 HOH HOH . I 6 HOH A 6 306 3 HOH HOH . I 6 HOH A 7 307 137 HOH HOH . I 6 HOH A 8 308 219 HOH HOH . I 6 HOH A 9 309 238 HOH HOH . I 6 HOH A 10 310 34 HOH HOH . I 6 HOH A 11 311 70 HOH HOH . I 6 HOH A 12 312 46 HOH HOH . I 6 HOH A 13 313 180 HOH HOH . I 6 HOH A 14 314 179 HOH HOH . I 6 HOH A 15 315 57 HOH HOH . I 6 HOH A 16 316 182 HOH HOH . I 6 HOH A 17 317 94 HOH HOH . I 6 HOH A 18 318 133 HOH HOH . I 6 HOH A 19 319 103 HOH HOH . I 6 HOH A 20 320 108 HOH HOH . I 6 HOH A 21 321 4 HOH HOH . I 6 HOH A 22 322 116 HOH HOH . I 6 HOH A 23 323 107 HOH HOH . I 6 HOH A 24 324 77 HOH HOH . I 6 HOH A 25 325 72 HOH HOH . I 6 HOH A 26 326 193 HOH HOH . I 6 HOH A 27 327 186 HOH HOH . I 6 HOH A 28 328 152 HOH HOH . I 6 HOH A 29 329 216 HOH HOH . I 6 HOH A 30 330 93 HOH HOH . I 6 HOH A 31 331 104 HOH HOH . I 6 HOH A 32 332 111 HOH HOH . I 6 HOH A 33 333 81 HOH HOH . I 6 HOH A 34 334 148 HOH HOH . I 6 HOH A 35 335 59 HOH HOH . I 6 HOH A 36 336 52 HOH HOH . I 6 HOH A 37 337 7 HOH HOH . I 6 HOH A 38 338 16 HOH HOH . I 6 HOH A 39 339 88 HOH HOH . I 6 HOH A 40 340 27 HOH HOH . I 6 HOH A 41 341 141 HOH HOH . I 6 HOH A 42 342 205 HOH HOH . I 6 HOH A 43 343 217 HOH HOH . I 6 HOH A 44 344 245 HOH HOH . I 6 HOH A 45 345 53 HOH HOH . I 6 HOH A 46 346 60 HOH HOH . I 6 HOH A 47 347 33 HOH HOH . I 6 HOH A 48 348 24 HOH HOH . I 6 HOH A 49 349 248 HOH HOH . I 6 HOH A 50 350 28 HOH HOH . I 6 HOH A 51 351 169 HOH HOH . I 6 HOH A 52 352 43 HOH HOH . I 6 HOH A 53 353 37 HOH HOH . I 6 HOH A 54 354 17 HOH HOH . I 6 HOH A 55 355 144 HOH HOH . I 6 HOH A 56 356 13 HOH HOH . I 6 HOH A 57 357 30 HOH HOH . I 6 HOH A 58 358 68 HOH HOH . I 6 HOH A 59 359 249 HOH HOH . I 6 HOH A 60 360 161 HOH HOH . I 6 HOH A 61 361 191 HOH HOH . I 6 HOH A 62 362 25 HOH HOH . I 6 HOH A 63 363 121 HOH HOH . I 6 HOH A 64 364 178 HOH HOH . I 6 HOH A 65 365 2 HOH HOH . I 6 HOH A 66 366 36 HOH HOH . I 6 HOH A 67 367 21 HOH HOH . I 6 HOH A 68 368 168 HOH HOH . I 6 HOH A 69 369 211 HOH HOH . I 6 HOH A 70 370 124 HOH HOH . I 6 HOH A 71 371 173 HOH HOH . I 6 HOH A 72 372 9 HOH HOH . I 6 HOH A 73 373 79 HOH HOH . I 6 HOH A 74 374 82 HOH HOH . I 6 HOH A 75 375 106 HOH HOH . I 6 HOH A 76 376 174 HOH HOH . I 6 HOH A 77 377 132 HOH HOH . I 6 HOH A 78 378 181 HOH HOH . I 6 HOH A 79 379 200 HOH HOH . I 6 HOH A 80 380 126 HOH HOH . I 6 HOH A 81 381 19 HOH HOH . I 6 HOH A 82 382 26 HOH HOH . I 6 HOH A 83 383 50 HOH HOH . I 6 HOH A 84 384 47 HOH HOH . I 6 HOH A 85 385 109 HOH HOH . I 6 HOH A 86 386 204 HOH HOH . I 6 HOH A 87 387 45 HOH HOH . I 6 HOH A 88 388 15 HOH HOH . I 6 HOH A 89 389 8 HOH HOH . I 6 HOH A 90 390 62 HOH HOH . I 6 HOH A 91 391 63 HOH HOH . I 6 HOH A 92 392 84 HOH HOH . I 6 HOH A 93 393 250 HOH HOH . I 6 HOH A 94 394 112 HOH HOH . I 6 HOH A 95 395 76 HOH HOH . I 6 HOH A 96 396 12 HOH HOH . I 6 HOH A 97 397 5 HOH HOH . I 6 HOH A 98 398 119 HOH HOH . I 6 HOH A 99 399 71 HOH HOH . I 6 HOH A 100 400 48 HOH HOH . I 6 HOH A 101 401 147 HOH HOH . I 6 HOH A 102 402 97 HOH HOH . I 6 HOH A 103 403 20 HOH HOH . I 6 HOH A 104 404 66 HOH HOH . I 6 HOH A 105 405 120 HOH HOH . I 6 HOH A 106 406 39 HOH HOH . I 6 HOH A 107 407 31 HOH HOH . I 6 HOH A 108 408 167 HOH HOH . I 6 HOH A 109 409 18 HOH HOH . I 6 HOH A 110 410 214 HOH HOH . I 6 HOH A 111 411 14 HOH HOH . I 6 HOH A 112 412 40 HOH HOH . I 6 HOH A 113 413 105 HOH HOH . I 6 HOH A 114 414 210 HOH HOH . I 6 HOH A 115 415 65 HOH HOH . I 6 HOH A 116 416 96 HOH HOH . I 6 HOH A 117 417 100 HOH HOH . I 6 HOH A 118 418 177 HOH HOH . I 6 HOH A 119 419 90 HOH HOH . I 6 HOH A 120 420 155 HOH HOH . I 6 HOH A 121 421 224 HOH HOH . I 6 HOH A 122 422 67 HOH HOH . I 6 HOH A 123 423 42 HOH HOH . I 6 HOH A 124 424 55 HOH HOH . I 6 HOH A 125 425 41 HOH HOH . I 6 HOH A 126 426 128 HOH HOH . I 6 HOH A 127 427 78 HOH HOH . I 6 HOH A 128 428 80 HOH HOH . I 6 HOH A 129 429 195 HOH HOH . I 6 HOH A 130 430 54 HOH HOH . I 6 HOH A 131 431 176 HOH HOH . I 6 HOH A 132 432 198 HOH HOH . I 6 HOH A 133 433 38 HOH HOH . I 6 HOH A 134 434 69 HOH HOH . I 6 HOH A 135 435 220 HOH HOH . I 6 HOH A 136 436 23 HOH HOH . I 6 HOH A 137 437 110 HOH HOH . I 6 HOH A 138 438 58 HOH HOH . I 6 HOH A 139 439 118 HOH HOH . I 6 HOH A 140 440 11 HOH HOH . I 6 HOH A 141 441 246 HOH HOH . I 6 HOH A 142 442 64 HOH HOH . I 6 HOH A 143 443 146 HOH HOH . I 6 HOH A 144 444 123 HOH HOH . I 6 HOH A 145 445 157 HOH HOH . I 6 HOH A 146 446 138 HOH HOH . I 6 HOH A 147 447 159 HOH HOH . I 6 HOH A 148 448 203 HOH HOH . I 6 HOH A 149 449 170 HOH HOH . I 6 HOH A 150 450 6 HOH HOH . I 6 HOH A 151 451 35 HOH HOH . I 6 HOH A 152 452 156 HOH HOH . I 6 HOH A 153 453 89 HOH HOH . I 6 HOH A 154 454 113 HOH HOH . I 6 HOH A 155 455 95 HOH HOH . I 6 HOH A 156 456 102 HOH HOH . I 6 HOH A 157 457 215 HOH HOH . I 6 HOH A 158 458 230 HOH HOH . I 6 HOH A 159 459 74 HOH HOH . I 6 HOH A 160 460 171 HOH HOH . I 6 HOH A 161 461 10 HOH HOH . I 6 HOH A 162 462 197 HOH HOH . I 6 HOH A 163 463 232 HOH HOH . I 6 HOH A 164 464 192 HOH HOH . I 6 HOH A 165 465 233 HOH HOH . I 6 HOH A 166 466 91 HOH HOH . I 6 HOH A 167 467 101 HOH HOH . I 6 HOH A 168 468 213 HOH HOH . I 6 HOH A 169 469 136 HOH HOH . I 6 HOH A 170 470 228 HOH HOH . I 6 HOH A 171 471 22 HOH HOH . I 6 HOH A 172 472 237 HOH HOH . I 6 HOH A 173 473 247 HOH HOH . I 6 HOH A 174 474 154 HOH HOH . I 6 HOH A 175 475 87 HOH HOH . I 6 HOH A 176 476 162 HOH HOH . I 6 HOH A 177 477 212 HOH HOH . I 6 HOH A 178 478 175 HOH HOH . I 6 HOH A 179 479 226 HOH HOH . I 6 HOH A 180 480 151 HOH HOH . I 6 HOH A 181 481 98 HOH HOH . I 6 HOH A 182 482 140 HOH HOH . I 6 HOH A 183 483 158 HOH HOH . I 6 HOH A 184 484 201 HOH HOH . I 6 HOH A 185 485 189 HOH HOH . I 6 HOH A 186 486 231 HOH HOH . I 6 HOH A 187 487 117 HOH HOH . I 6 HOH A 188 488 99 HOH HOH . I 6 HOH A 189 489 135 HOH HOH . I 6 HOH A 190 490 190 HOH HOH . I 6 HOH A 191 491 134 HOH HOH . I 6 HOH A 192 492 225 HOH HOH . I 6 HOH A 193 493 240 HOH HOH . I 6 HOH A 194 494 207 HOH HOH . I 6 HOH A 195 495 218 HOH HOH . I 6 HOH A 196 496 122 HOH HOH . I 6 HOH A 197 497 229 HOH HOH . I 6 HOH A 198 498 239 HOH HOH . I 6 HOH A 199 499 172 HOH HOH . I 6 HOH A 200 500 163 HOH HOH . I 6 HOH A 201 501 243 HOH HOH . I 6 HOH A 202 502 73 HOH HOH . I 6 HOH A 203 503 127 HOH HOH . I 6 HOH A 204 504 185 HOH HOH . I 6 HOH A 205 505 32 HOH HOH . I 6 HOH A 206 506 221 HOH HOH . I 6 HOH A 207 507 86 HOH HOH . I 6 HOH A 208 508 236 HOH HOH . I 6 HOH A 209 509 83 HOH HOH . I 6 HOH A 210 510 209 HOH HOH . I 6 HOH A 211 511 85 HOH HOH . I 6 HOH A 212 512 202 HOH HOH . I 6 HOH A 213 513 223 HOH HOH . I 6 HOH A 214 514 129 HOH HOH . I 6 HOH A 215 515 187 HOH HOH . I 6 HOH A 216 516 56 HOH HOH . I 6 HOH A 217 517 208 HOH HOH . I 6 HOH A 218 518 142 HOH HOH . I 6 HOH A 219 519 235 HOH HOH . I 6 HOH A 220 520 206 HOH HOH . I 6 HOH A 221 521 75 HOH HOH . I 6 HOH A 222 522 165 HOH HOH . I 6 HOH A 223 523 241 HOH HOH . I 6 HOH A 224 524 153 HOH HOH . I 6 HOH A 225 525 114 HOH HOH . I 6 HOH A 226 526 199 HOH HOH . I 6 HOH A 227 527 92 HOH HOH . I 6 HOH A 228 528 222 HOH HOH . I 6 HOH A 229 529 125 HOH HOH . I 6 HOH A 230 530 242 HOH HOH . I 6 HOH A 231 531 164 HOH HOH . I 6 HOH A 232 532 160 HOH HOH . I 6 HOH A 233 533 244 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 TEH . . . B 2 7.345 19.732 28.955 0.5 20 ? C13 TEH 201 A 1 HETATM 2 C C15 TEH . . . B 2 8.654 21.064 30.522 0.5 20 ? C15 TEH 201 A 1 HETATM 3 C C17 TEH . . . B 2 8.733 22.122 29.472 0.5 20 ? C17 TEH 201 A 1 HETATM 4 C C01 TEH . . . B 2 14.18 22.268 24.804 0.5 20 ? C01 TEH 201 A 1 HETATM 5 C C02 TEH . . . B 2 13.479 23.282 24.244 0.5 20 ? C02 TEH 201 A 1 HETATM 6 C C03 TEH . . . B 2 12.111 23.33 24.354 0.5 20 ? C03 TEH 201 A 1 HETATM 7 C C04 TEH . . . B 2 11.469 22.364 25.082 0.5 20 ? C04 TEH 201 A 1 HETATM 8 C C05 TEH . . . B 2 12.165 21.323 25.657 0.5 20 ? C05 TEH 201 A 1 HETATM 9 C C06 TEH . . . B 2 13.529 21.278 25.497 0.5 20 ? C06 TEH 201 A 1 HETATM 10 C C08 TEH . . . B 2 9.191 22.238 25.773 0.5 20 ? C08 TEH 201 A 1 HETATM 11 C C09 TEH . . . B 2 9.428 22.382 27.256 0.5 20 ? C09 TEH 201 A 1 HETATM 12 C C12 TEH . . . B 2 8.037 20.342 27.759 0.5 20 ? C12 TEH 201 A 1 HETATM 13 N N11 TEH . . . B 2 8.714 21.612 28.096 0.5 20 ? N11 TEH 201 A 1 HETATM 14 N N14 TEH . . . B 2 8.154 19.921 30.146 0.5 20 ? N14 TEH 201 A 1 HETATM 15 O O07 TEH . . . B 2 10.223 22.89 25.032 0.5 20 ? O07 TEH 201 A 1 HETATM 16 O O10 TEH . . . B 2 10.289 23.142 27.653 0.5 20 ? O10 TEH 201 A 1 HETATM 17 O O16 TEH . . . B 2 8.813 21.366 31.705 0.5 20 ? O16 TEH 201 A 1 # _model_server_stats.io_time_ms 81 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #