data_7H5F # _model_server_result.job_id a18W9U6XUonEp7fyNdNqLA _model_server_result.datetime_utc '2024-11-27 20:04:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7h5f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":935}' # _entry.id 7H5F # _exptl.entry_id 7H5F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 36 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.72 _cell.angle_gamma 90 _cell.entry_id 7H5F _cell.length_a 45.005 _cell.length_b 72.557 _cell.length_c 51.878 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H5F _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 IA N N ? 3 JA N N ? 3 KA N N ? 3 LA N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 255 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 255 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 290 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 290 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.025 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 89 n n S C1 DMS sing 90 n n S C2 DMS sing 91 n n C1 H11 DMS sing 92 n n C1 H12 DMS sing 93 n n C1 H13 DMS sing 94 n n C2 H21 DMS sing 95 n n C2 H22 DMS sing 96 n n C2 H23 DMS sing 97 n n # _atom_sites.entry_id 7H5F _atom_sites.fract_transf_matrix[1][1] 0.02222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00753 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013782 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020353 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 901 901 ACT ACT . C 3 DMS A 1 902 2501 DMS DMS . D 3 DMS A 1 903 3001 DMS DMS . E 3 DMS A 1 904 3101 DMS DMS . F 3 DMS A 1 905 3201 DMS DMS . G 3 DMS A 1 906 3601 DMS DMS . H 3 DMS A 1 907 3701 DMS DMS . I 3 DMS A 1 908 3801 DMS DMS . J 3 DMS A 1 909 4001 DMS DMS . K 3 DMS A 1 910 4101 DMS DMS . L 3 DMS A 1 911 4102 DMS DMS . M 3 DMS A 1 912 4104 DMS DMS . N 3 DMS A 1 913 4105 DMS DMS . O 3 DMS A 1 914 4106 DMS DMS . P 3 DMS A 1 915 4107 DMS DMS . Q 3 DMS A 1 916 4108 DMS DMS . R 3 DMS A 1 917 4109 DMS DMS . S 3 DMS A 1 918 4111 DMS DMS . T 3 DMS A 1 919 4112 DMS DMS . U 3 DMS A 1 920 4201 DMS DMS . V 3 DMS A 1 921 4301 DMS DMS . W 3 DMS A 1 922 4401 DMS DMS . X 3 DMS A 1 923 4501 DMS DMS . Y 3 DMS A 1 924 4601 DMS DMS . Z 3 DMS A 1 925 4701 DMS DMS . AA 3 DMS A 1 926 4801 DMS DMS . BA 3 DMS A 1 927 4901 DMS DMS . CA 3 DMS A 1 928 5001 DMS DMS . DA 3 DMS A 1 929 5101 DMS DMS . EA 3 DMS A 1 930 5201 DMS DMS . FA 3 DMS A 1 931 5301 DMS DMS . GA 3 DMS A 1 932 5401 DMS DMS . HA 3 DMS A 1 933 5501 DMS DMS . IA 3 DMS A 1 934 5601 DMS DMS . JA 3 DMS A 1 935 5701 DMS DMS . KA 3 DMS A 1 936 5801 DMS DMS . LA 3 DMS A 1 937 5802 DMS DMS . MA 4 HOH A 1 1001 89 HOH HOH . MA 4 HOH A 2 1002 159 HOH HOH . MA 4 HOH A 3 1003 128 HOH HOH . MA 4 HOH A 4 1004 19 HOH HOH . MA 4 HOH A 5 1005 192 HOH HOH . MA 4 HOH A 6 1006 201 HOH HOH . MA 4 HOH A 7 1007 97 HOH HOH . MA 4 HOH A 8 1008 46 HOH HOH . MA 4 HOH A 9 1009 189 HOH HOH . MA 4 HOH A 10 1010 5 HOH HOH . MA 4 HOH A 11 1011 199 HOH HOH . MA 4 HOH A 12 1012 104 HOH HOH . MA 4 HOH A 13 1013 167 HOH HOH . MA 4 HOH A 14 1014 34 HOH HOH . MA 4 HOH A 15 1015 122 HOH HOH . MA 4 HOH A 16 1016 32 HOH HOH . MA 4 HOH A 17 1017 221 HOH HOH . MA 4 HOH A 18 1018 101 HOH HOH . MA 4 HOH A 19 1019 9 HOH HOH . MA 4 HOH A 20 1020 84 HOH HOH . MA 4 HOH A 21 1021 22 HOH HOH . MA 4 HOH A 22 1022 16 HOH HOH . MA 4 HOH A 23 1023 23 HOH HOH . MA 4 HOH A 24 1024 29 HOH HOH . MA 4 HOH A 25 1025 87 HOH HOH . MA 4 HOH A 26 1026 67 HOH HOH . MA 4 HOH A 27 1027 40 HOH HOH . MA 4 HOH A 28 1028 109 HOH HOH . MA 4 HOH A 29 1029 8 HOH HOH . MA 4 HOH A 30 1030 26 HOH HOH . MA 4 HOH A 31 1031 43 HOH HOH . MA 4 HOH A 32 1032 118 HOH HOH . MA 4 HOH A 33 1033 52 HOH HOH . MA 4 HOH A 34 1034 73 HOH HOH . MA 4 HOH A 35 1035 226 HOH HOH . MA 4 HOH A 36 1036 1 HOH HOH . MA 4 HOH A 37 1037 71 HOH HOH . MA 4 HOH A 38 1038 180 HOH HOH . MA 4 HOH A 39 1039 132 HOH HOH . MA 4 HOH A 40 1040 172 HOH HOH . MA 4 HOH A 41 1041 57 HOH HOH . MA 4 HOH A 42 1042 90 HOH HOH . MA 4 HOH A 43 1043 218 HOH HOH . MA 4 HOH A 44 1044 38 HOH HOH . MA 4 HOH A 45 1045 173 HOH HOH . MA 4 HOH A 46 1046 64 HOH HOH . MA 4 HOH A 47 1047 215 HOH HOH . MA 4 HOH A 48 1048 4 HOH HOH . MA 4 HOH A 49 1049 3 HOH HOH . MA 4 HOH A 50 1050 81 HOH HOH . MA 4 HOH A 51 1051 116 HOH HOH . MA 4 HOH A 52 1052 10 HOH HOH . MA 4 HOH A 53 1053 150 HOH HOH . MA 4 HOH A 54 1054 58 HOH HOH . MA 4 HOH A 55 1055 28 HOH HOH . MA 4 HOH A 56 1056 25 HOH HOH . MA 4 HOH A 57 1057 82 HOH HOH . MA 4 HOH A 58 1058 41 HOH HOH . MA 4 HOH A 59 1059 44 HOH HOH . MA 4 HOH A 60 1060 36 HOH HOH . MA 4 HOH A 61 1061 50 HOH HOH . MA 4 HOH A 62 1062 56 HOH HOH . MA 4 HOH A 63 1063 213 HOH HOH . MA 4 HOH A 64 1064 13 HOH HOH . MA 4 HOH A 65 1065 83 HOH HOH . MA 4 HOH A 66 1066 174 HOH HOH . MA 4 HOH A 67 1067 51 HOH HOH . MA 4 HOH A 68 1068 93 HOH HOH . MA 4 HOH A 69 1069 148 HOH HOH . MA 4 HOH A 70 1070 59 HOH HOH . MA 4 HOH A 71 1071 24 HOH HOH . MA 4 HOH A 72 1072 197 HOH HOH . MA 4 HOH A 73 1073 205 HOH HOH . MA 4 HOH A 74 1074 155 HOH HOH . MA 4 HOH A 75 1075 6 HOH HOH . MA 4 HOH A 76 1076 74 HOH HOH . MA 4 HOH A 77 1077 11 HOH HOH . MA 4 HOH A 78 1078 53 HOH HOH . MA 4 HOH A 79 1079 20 HOH HOH . MA 4 HOH A 80 1080 107 HOH HOH . MA 4 HOH A 81 1081 17 HOH HOH . MA 4 HOH A 82 1082 105 HOH HOH . MA 4 HOH A 83 1083 18 HOH HOH . MA 4 HOH A 84 1084 21 HOH HOH . MA 4 HOH A 85 1085 15 HOH HOH . MA 4 HOH A 86 1086 88 HOH HOH . MA 4 HOH A 87 1087 202 HOH HOH . MA 4 HOH A 88 1088 12 HOH HOH . MA 4 HOH A 89 1089 33 HOH HOH . MA 4 HOH A 90 1090 79 HOH HOH . MA 4 HOH A 91 1091 154 HOH HOH . MA 4 HOH A 92 1092 95 HOH HOH . MA 4 HOH A 93 1093 55 HOH HOH . MA 4 HOH A 94 1094 94 HOH HOH . MA 4 HOH A 95 1095 145 HOH HOH . MA 4 HOH A 96 1096 92 HOH HOH . MA 4 HOH A 97 1097 183 HOH HOH . MA 4 HOH A 98 1098 85 HOH HOH . MA 4 HOH A 99 1099 27 HOH HOH . MA 4 HOH A 100 1100 135 HOH HOH . MA 4 HOH A 101 1101 217 HOH HOH . MA 4 HOH A 102 1102 133 HOH HOH . MA 4 HOH A 103 1103 143 HOH HOH . MA 4 HOH A 104 1104 70 HOH HOH . MA 4 HOH A 105 1105 7 HOH HOH . MA 4 HOH A 106 1106 39 HOH HOH . MA 4 HOH A 107 1107 186 HOH HOH . MA 4 HOH A 108 1108 187 HOH HOH . MA 4 HOH A 109 1109 134 HOH HOH . MA 4 HOH A 110 1110 188 HOH HOH . MA 4 HOH A 111 1111 2 HOH HOH . MA 4 HOH A 112 1112 111 HOH HOH . MA 4 HOH A 113 1113 48 HOH HOH . MA 4 HOH A 114 1114 223 HOH HOH . MA 4 HOH A 115 1115 54 HOH HOH . MA 4 HOH A 116 1116 142 HOH HOH . MA 4 HOH A 117 1117 66 HOH HOH . MA 4 HOH A 118 1118 184 HOH HOH . MA 4 HOH A 119 1119 61 HOH HOH . MA 4 HOH A 120 1120 99 HOH HOH . MA 4 HOH A 121 1121 78 HOH HOH . MA 4 HOH A 122 1122 37 HOH HOH . MA 4 HOH A 123 1123 160 HOH HOH . MA 4 HOH A 124 1124 204 HOH HOH . MA 4 HOH A 125 1125 102 HOH HOH . MA 4 HOH A 126 1126 68 HOH HOH . MA 4 HOH A 127 1127 30 HOH HOH . MA 4 HOH A 128 1128 136 HOH HOH . MA 4 HOH A 129 1129 181 HOH HOH . MA 4 HOH A 130 1130 75 HOH HOH . MA 4 HOH A 131 1131 117 HOH HOH . MA 4 HOH A 132 1132 35 HOH HOH . MA 4 HOH A 133 1133 185 HOH HOH . MA 4 HOH A 134 1134 14 HOH HOH . MA 4 HOH A 135 1135 195 HOH HOH . MA 4 HOH A 136 1136 113 HOH HOH . MA 4 HOH A 137 1137 125 HOH HOH . MA 4 HOH A 138 1138 194 HOH HOH . MA 4 HOH A 139 1139 47 HOH HOH . MA 4 HOH A 140 1140 42 HOH HOH . MA 4 HOH A 141 1141 196 HOH HOH . MA 4 HOH A 142 1142 45 HOH HOH . MA 4 HOH A 143 1143 123 HOH HOH . MA 4 HOH A 144 1144 119 HOH HOH . MA 4 HOH A 145 1145 176 HOH HOH . MA 4 HOH A 146 1146 179 HOH HOH . MA 4 HOH A 147 1147 191 HOH HOH . MA 4 HOH A 148 1148 224 HOH HOH . MA 4 HOH A 149 1149 216 HOH HOH . MA 4 HOH A 150 1150 76 HOH HOH . MA 4 HOH A 151 1151 80 HOH HOH . MA 4 HOH A 152 1152 114 HOH HOH . MA 4 HOH A 153 1153 91 HOH HOH . MA 4 HOH A 154 1154 164 HOH HOH . MA 4 HOH A 155 1155 151 HOH HOH . MA 4 HOH A 156 1156 193 HOH HOH . MA 4 HOH A 157 1157 207 HOH HOH . MA 4 HOH A 158 1158 140 HOH HOH . MA 4 HOH A 159 1159 139 HOH HOH . MA 4 HOH A 160 1160 103 HOH HOH . MA 4 HOH A 161 1161 209 HOH HOH . MA 4 HOH A 162 1162 157 HOH HOH . MA 4 HOH A 163 1163 86 HOH HOH . MA 4 HOH A 164 1164 49 HOH HOH . MA 4 HOH A 165 1165 72 HOH HOH . MA 4 HOH A 166 1166 110 HOH HOH . MA 4 HOH A 167 1167 208 HOH HOH . MA 4 HOH A 168 1168 153 HOH HOH . MA 4 HOH A 169 1169 138 HOH HOH . MA 4 HOH A 170 1170 31 HOH HOH . MA 4 HOH A 171 1171 115 HOH HOH . MA 4 HOH A 172 1172 141 HOH HOH . MA 4 HOH A 173 1173 177 HOH HOH . MA 4 HOH A 174 1174 166 HOH HOH . MA 4 HOH A 175 1175 129 HOH HOH . MA 4 HOH A 176 1176 63 HOH HOH . MA 4 HOH A 177 1177 220 HOH HOH . MA 4 HOH A 178 1178 170 HOH HOH . MA 4 HOH A 179 1179 211 HOH HOH . MA 4 HOH A 180 1180 69 HOH HOH . MA 4 HOH A 181 1181 169 HOH HOH . MA 4 HOH A 182 1182 146 HOH HOH . MA 4 HOH A 183 1183 112 HOH HOH . MA 4 HOH A 184 1184 175 HOH HOH . MA 4 HOH A 185 1185 156 HOH HOH . MA 4 HOH A 186 1186 168 HOH HOH . MA 4 HOH A 187 1187 162 HOH HOH . MA 4 HOH A 188 1188 171 HOH HOH . MA 4 HOH A 189 1189 60 HOH HOH . MA 4 HOH A 190 1190 121 HOH HOH . MA 4 HOH A 191 1191 178 HOH HOH . MA 4 HOH A 192 1192 77 HOH HOH . MA 4 HOH A 193 1193 200 HOH HOH . MA 4 HOH A 194 1194 203 HOH HOH . MA 4 HOH A 195 1195 126 HOH HOH . MA 4 HOH A 196 1196 163 HOH HOH . MA 4 HOH A 197 1197 144 HOH HOH . MA 4 HOH A 198 1198 158 HOH HOH . MA 4 HOH A 199 1199 212 HOH HOH . MA 4 HOH A 200 1200 131 HOH HOH . MA 4 HOH A 201 1201 225 HOH HOH . MA 4 HOH A 202 1202 124 HOH HOH . MA 4 HOH A 203 1203 65 HOH HOH . MA 4 HOH A 204 1204 214 HOH HOH . MA 4 HOH A 205 1205 152 HOH HOH . MA 4 HOH A 206 1206 106 HOH HOH . MA 4 HOH A 207 1207 206 HOH HOH . MA 4 HOH A 208 1208 190 HOH HOH . MA 4 HOH A 209 1209 210 HOH HOH . MA 4 HOH A 210 1210 130 HOH HOH . MA 4 HOH A 211 1211 149 HOH HOH . MA 4 HOH A 212 1212 222 HOH HOH . MA 4 HOH A 213 1213 182 HOH HOH . MA 4 HOH A 214 1214 137 HOH HOH . MA 4 HOH A 215 1215 62 HOH HOH . MA 4 HOH A 216 1216 161 HOH HOH . MA 4 HOH A 217 1217 198 HOH HOH . MA 4 HOH A 218 1218 147 HOH HOH . MA 4 HOH A 219 1219 98 HOH HOH . MA 4 HOH A 220 1220 165 HOH HOH . MA 4 HOH A 221 1221 120 HOH HOH . MA 4 HOH A 222 1222 108 HOH HOH . MA 4 HOH A 223 1223 219 HOH HOH . MA 4 HOH A 224 1224 96 HOH HOH . MA 4 HOH A 225 1225 127 HOH HOH . MA 4 HOH A 226 1226 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . JA 3 0.862 19.513 -0.257 1 121.57 ? S DMS 935 A 1 HETATM 2 O O DMS . . . JA 3 1.184 18.392 0.675 1 121.57 ? O DMS 935 A 1 HETATM 3 C C1 DMS . . . JA 3 0.237 20.817 0.763 1 121.57 ? C1 DMS 935 A 1 HETATM 4 C C2 DMS . . . JA 3 2.412 20.262 -0.672 1 121.53 ? C2 DMS 935 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #