data_7H8Y
#
_model_server_result.job_id            9ZbOBXMwA3QzMLQp7S6lHA 
_model_server_result.datetime_utc      '2024-10-10 09:22:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7h8y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":203}' 
#
_entry.id    7H8Y 
#
_exptl.entry_id    7H8Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7H8Y 
_cell.length_a            87.459 
_cell.length_b            87.459 
_cell.length_c            84.596 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7H8Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,J,X 1 1 
B,K,L,M,N,O,Y 2 1 
C,P,Q,R,Z 3 1 
D,S,T,U,V,W,AA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 L N N 
? 2 M N N 
? 2 P N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7H8Y 
_atom_sites.fract_transf_matrix[1][1]    0.011434 
_atom_sites.fract_transf_matrix[1][2]    0.006601 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013203 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011821 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 DMS A 1 201 203 DMS DMS . 
F 2 DMS A 1 202 206 DMS DMS . 
G 2 DMS A 1 203 207 DMS DMS . 
H 2 DMS A 1 204 208 DMS DMS . 
I 3 CL A 1 205 301 CL CL . 
J 4 ISN A 1 206 305 ISN LIG . 
K 4 ISN B 1 201 304 ISN LIG . 
L 2 DMS B 1 202 201 DMS DMS . 
M 2 DMS B 1 203 203 DMS DMS . 
N 3 CL B 1 204 307 CL CL . 
O 4 ISN B 1 205 308 ISN LIG . 
P 2 DMS C 1 201 201 DMS DMS . 
Q 3 CL C 1 202 304 CL CL . 
R 4 ISN C 1 203 401 ISN LIG . 
S 2 DMS D 1 201 201 DMS DMS . 
T 2 DMS D 1 202 204 DMS DMS . 
U 2 DMS D 1 203 205 DMS DMS . 
V 3 CL D 1 204 305 CL CL . 
W 4 ISN D 1 205 306 ISN LIG . 
X 5 HOH A 1 301 10 HOH HOH . 
X 5 HOH A 2 302 7 HOH HOH . 
X 5 HOH A 3 303 3 HOH HOH . 
X 5 HOH A 4 304 22 HOH HOH . 
X 5 HOH A 5 305 18 HOH HOH . 
X 5 HOH A 6 306 32 HOH HOH . 
X 5 HOH A 7 307 4 HOH HOH . 
X 5 HOH A 8 308 91 HOH HOH . 
X 5 HOH A 9 309 1 HOH HOH . 
X 5 HOH A 10 310 193 HOH HOH . 
X 5 HOH A 11 311 6 HOH HOH . 
X 5 HOH A 12 312 19 HOH HOH . 
X 5 HOH A 13 313 78 HOH HOH . 
X 5 HOH A 14 314 17 HOH HOH . 
X 5 HOH A 15 315 180 HOH HOH . 
X 5 HOH A 16 316 114 HOH HOH . 
X 5 HOH A 17 317 181 HOH HOH . 
X 5 HOH A 18 318 79 HOH HOH . 
X 5 HOH A 19 319 25 HOH HOH . 
X 5 HOH A 20 320 11 HOH HOH . 
X 5 HOH A 21 321 217 HOH HOH . 
X 5 HOH A 22 322 2 HOH HOH . 
X 5 HOH A 23 323 143 HOH HOH . 
X 5 HOH A 24 324 115 HOH HOH . 
X 5 HOH A 25 325 134 HOH HOH . 
X 5 HOH A 26 326 85 HOH HOH . 
X 5 HOH A 27 327 14 HOH HOH . 
X 5 HOH A 28 328 30 HOH HOH . 
X 5 HOH A 29 329 26 HOH HOH . 
X 5 HOH A 30 330 23 HOH HOH . 
X 5 HOH A 31 331 13 HOH HOH . 
X 5 HOH A 32 332 111 HOH HOH . 
X 5 HOH A 33 333 16 HOH HOH . 
X 5 HOH A 34 334 170 HOH HOH . 
X 5 HOH A 35 335 179 HOH HOH . 
X 5 HOH A 36 336 161 HOH HOH . 
X 5 HOH A 37 337 20 HOH HOH . 
X 5 HOH A 38 338 215 HOH HOH . 
X 5 HOH A 39 339 24 HOH HOH . 
X 5 HOH A 40 340 8 HOH HOH . 
X 5 HOH A 41 341 210 HOH HOH . 
X 5 HOH A 42 342 130 HOH HOH . 
X 5 HOH A 43 343 75 HOH HOH . 
X 5 HOH A 44 344 12 HOH HOH . 
X 5 HOH A 45 345 148 HOH HOH . 
X 5 HOH A 46 346 149 HOH HOH . 
X 5 HOH A 47 347 199 HOH HOH . 
X 5 HOH A 48 348 101 HOH HOH . 
X 5 HOH A 49 349 27 HOH HOH . 
X 5 HOH A 50 350 221 HOH HOH . 
X 5 HOH A 51 351 15 HOH HOH . 
X 5 HOH A 52 352 191 HOH HOH . 
X 5 HOH A 53 353 127 HOH HOH . 
X 5 HOH A 54 354 192 HOH HOH . 
X 5 HOH A 55 355 28 HOH HOH . 
X 5 HOH A 56 356 159 HOH HOH . 
X 5 HOH A 57 357 211 HOH HOH . 
X 5 HOH A 58 358 57 HOH HOH . 
X 5 HOH A 59 359 163 HOH HOH . 
X 5 HOH A 60 360 119 HOH HOH . 
X 5 HOH A 61 361 140 HOH HOH . 
X 5 HOH A 62 362 214 HOH HOH . 
X 5 HOH A 63 363 145 HOH HOH . 
X 5 HOH A 64 364 164 HOH HOH . 
X 5 HOH A 65 365 136 HOH HOH . 
X 5 HOH A 66 366 218 HOH HOH . 
X 5 HOH A 67 367 138 HOH HOH . 
X 5 HOH A 68 368 29 HOH HOH . 
X 5 HOH A 69 369 213 HOH HOH . 
X 5 HOH A 70 370 5 HOH HOH . 
X 5 HOH A 71 371 220 HOH HOH . 
X 5 HOH A 72 372 33 HOH HOH . 
X 5 HOH A 73 373 194 HOH HOH . 
X 5 HOH A 74 374 226 HOH HOH . 
X 5 HOH A 75 375 212 HOH HOH . 
X 5 HOH A 76 376 31 HOH HOH . 
X 5 HOH A 77 377 233 HOH HOH . 
X 5 HOH A 78 378 184 HOH HOH . 
X 5 HOH A 79 379 205 HOH HOH . 
X 5 HOH A 80 380 231 HOH HOH . 
Y 5 HOH B 1 301 36 HOH HOH . 
Y 5 HOH B 2 302 104 HOH HOH . 
Y 5 HOH B 3 303 38 HOH HOH . 
Y 5 HOH B 4 304 35 HOH HOH . 
Y 5 HOH B 5 305 203 HOH HOH . 
Y 5 HOH B 6 306 206 HOH HOH . 
Y 5 HOH B 7 307 77 HOH HOH . 
Y 5 HOH B 8 308 95 HOH HOH . 
Y 5 HOH B 9 309 34 HOH HOH . 
Y 5 HOH B 10 310 146 HOH HOH . 
Y 5 HOH B 11 311 103 HOH HOH . 
Y 5 HOH B 12 312 40 HOH HOH . 
Y 5 HOH B 13 313 93 HOH HOH . 
Y 5 HOH B 14 314 131 HOH HOH . 
Y 5 HOH B 15 315 122 HOH HOH . 
Y 5 HOH B 16 316 188 HOH HOH . 
Y 5 HOH B 17 317 173 HOH HOH . 
Y 5 HOH B 18 318 88 HOH HOH . 
Y 5 HOH B 19 319 189 HOH HOH . 
Y 5 HOH B 20 320 139 HOH HOH . 
Y 5 HOH B 21 321 66 HOH HOH . 
Y 5 HOH B 22 322 190 HOH HOH . 
Y 5 HOH B 23 323 37 HOH HOH . 
Y 5 HOH B 24 324 175 HOH HOH . 
Y 5 HOH B 25 325 157 HOH HOH . 
Y 5 HOH B 26 326 106 HOH HOH . 
Y 5 HOH B 27 327 99 HOH HOH . 
Y 5 HOH B 28 328 81 HOH HOH . 
Y 5 HOH B 29 329 208 HOH HOH . 
Y 5 HOH B 30 330 113 HOH HOH . 
Y 5 HOH B 31 331 195 HOH HOH . 
Y 5 HOH B 32 332 89 HOH HOH . 
Y 5 HOH B 33 333 160 HOH HOH . 
Y 5 HOH B 34 334 200 HOH HOH . 
Y 5 HOH B 35 335 216 HOH HOH . 
Y 5 HOH B 36 336 39 HOH HOH . 
Y 5 HOH B 37 337 109 HOH HOH . 
Y 5 HOH B 38 338 230 HOH HOH . 
Y 5 HOH B 39 339 176 HOH HOH . 
Y 5 HOH B 40 340 92 HOH HOH . 
Y 5 HOH B 41 341 222 HOH HOH . 
Y 5 HOH B 42 342 167 HOH HOH . 
Y 5 HOH B 43 343 186 HOH HOH . 
Y 5 HOH B 44 344 237 HOH HOH . 
Y 5 HOH B 45 345 187 HOH HOH . 
Y 5 HOH B 46 346 209 HOH HOH . 
Y 5 HOH B 47 347 228 HOH HOH . 
Y 5 HOH B 48 348 116 HOH HOH . 
Y 5 HOH B 49 349 107 HOH HOH . 
Y 5 HOH B 50 350 41 HOH HOH . 
Y 5 HOH B 51 351 168 HOH HOH . 
Y 5 HOH B 52 352 238 HOH HOH . 
Z 5 HOH C 1 301 96 HOH HOH . 
Z 5 HOH C 2 302 153 HOH HOH . 
Z 5 HOH C 3 303 21 HOH HOH . 
Z 5 HOH C 4 304 137 HOH HOH . 
Z 5 HOH C 5 305 42 HOH HOH . 
Z 5 HOH C 6 306 43 HOH HOH . 
Z 5 HOH C 7 307 50 HOH HOH . 
Z 5 HOH C 8 308 47 HOH HOH . 
Z 5 HOH C 9 309 49 HOH HOH . 
Z 5 HOH C 10 310 110 HOH HOH . 
Z 5 HOH C 11 311 46 HOH HOH . 
Z 5 HOH C 12 312 132 HOH HOH . 
Z 5 HOH C 13 313 224 HOH HOH . 
Z 5 HOH C 14 314 197 HOH HOH . 
Z 5 HOH C 15 315 59 HOH HOH . 
Z 5 HOH C 16 316 207 HOH HOH . 
Z 5 HOH C 17 317 178 HOH HOH . 
Z 5 HOH C 18 318 76 HOH HOH . 
Z 5 HOH C 19 319 45 HOH HOH . 
Z 5 HOH C 20 320 58 HOH HOH . 
Z 5 HOH C 21 321 166 HOH HOH . 
Z 5 HOH C 22 322 51 HOH HOH . 
Z 5 HOH C 23 323 196 HOH HOH . 
Z 5 HOH C 24 324 48 HOH HOH . 
Z 5 HOH C 25 325 54 HOH HOH . 
Z 5 HOH C 26 326 198 HOH HOH . 
Z 5 HOH C 27 327 52 HOH HOH . 
Z 5 HOH C 28 328 169 HOH HOH . 
Z 5 HOH C 29 329 174 HOH HOH . 
Z 5 HOH C 30 330 185 HOH HOH . 
Z 5 HOH C 31 331 126 HOH HOH . 
Z 5 HOH C 32 332 165 HOH HOH . 
Z 5 HOH C 33 333 55 HOH HOH . 
Z 5 HOH C 34 334 125 HOH HOH . 
Z 5 HOH C 35 335 53 HOH HOH . 
Z 5 HOH C 36 336 102 HOH HOH . 
Z 5 HOH C 37 337 112 HOH HOH . 
Z 5 HOH C 38 338 105 HOH HOH . 
Z 5 HOH C 39 339 240 HOH HOH . 
Z 5 HOH C 40 340 9 HOH HOH . 
Z 5 HOH C 41 341 73 HOH HOH . 
Z 5 HOH C 42 342 171 HOH HOH . 
Z 5 HOH C 43 343 121 HOH HOH . 
Z 5 HOH C 44 344 204 HOH HOH . 
Z 5 HOH C 45 345 56 HOH HOH . 
Z 5 HOH C 46 346 154 HOH HOH . 
Z 5 HOH C 47 347 234 HOH HOH . 
Z 5 HOH C 48 348 155 HOH HOH . 
Z 5 HOH C 49 349 183 HOH HOH . 
Z 5 HOH C 50 350 219 HOH HOH . 
Z 5 HOH C 51 351 162 HOH HOH . 
Z 5 HOH C 52 352 94 HOH HOH . 
Z 5 HOH C 53 353 60 HOH HOH . 
Z 5 HOH C 54 354 133 HOH HOH . 
Z 5 HOH C 55 355 144 HOH HOH . 
Z 5 HOH C 56 356 229 HOH HOH . 
Z 5 HOH C 57 357 227 HOH HOH . 
Z 5 HOH C 58 358 239 HOH HOH . 
AA 5 HOH D 1 301 67 HOH HOH . 
AA 5 HOH D 2 302 61 HOH HOH . 
AA 5 HOH D 3 303 124 HOH HOH . 
AA 5 HOH D 4 304 128 HOH HOH . 
AA 5 HOH D 5 305 80 HOH HOH . 
AA 5 HOH D 6 306 70 HOH HOH . 
AA 5 HOH D 7 307 118 HOH HOH . 
AA 5 HOH D 8 308 100 HOH HOH . 
AA 5 HOH D 9 309 62 HOH HOH . 
AA 5 HOH D 10 310 83 HOH HOH . 
AA 5 HOH D 11 311 108 HOH HOH . 
AA 5 HOH D 12 312 64 HOH HOH . 
AA 5 HOH D 13 313 84 HOH HOH . 
AA 5 HOH D 14 314 98 HOH HOH . 
AA 5 HOH D 15 315 201 HOH HOH . 
AA 5 HOH D 16 316 68 HOH HOH . 
AA 5 HOH D 17 317 71 HOH HOH . 
AA 5 HOH D 18 318 156 HOH HOH . 
AA 5 HOH D 19 319 65 HOH HOH . 
AA 5 HOH D 20 320 86 HOH HOH . 
AA 5 HOH D 21 321 147 HOH HOH . 
AA 5 HOH D 22 322 63 HOH HOH . 
AA 5 HOH D 23 323 158 HOH HOH . 
AA 5 HOH D 24 324 97 HOH HOH . 
AA 5 HOH D 25 325 74 HOH HOH . 
AA 5 HOH D 26 326 223 HOH HOH . 
AA 5 HOH D 27 327 69 HOH HOH . 
AA 5 HOH D 28 328 44 HOH HOH . 
AA 5 HOH D 29 329 123 HOH HOH . 
AA 5 HOH D 30 330 182 HOH HOH . 
AA 5 HOH D 31 331 235 HOH HOH . 
AA 5 HOH D 32 332 151 HOH HOH . 
AA 5 HOH D 33 333 82 HOH HOH . 
AA 5 HOH D 34 334 117 HOH HOH . 
AA 5 HOH D 35 335 129 HOH HOH . 
AA 5 HOH D 36 336 90 HOH HOH . 
AA 5 HOH D 37 337 172 HOH HOH . 
AA 5 HOH D 38 338 120 HOH HOH . 
AA 5 HOH D 39 339 225 HOH HOH . 
AA 5 HOH D 40 340 135 HOH HOH . 
AA 5 HOH D 41 341 202 HOH HOH . 
AA 5 HOH D 42 342 150 HOH HOH . 
AA 5 HOH D 43 343 72 HOH HOH . 
AA 5 HOH D 44 344 152 HOH HOH . 
AA 5 HOH D 45 345 232 HOH HOH . 
AA 5 HOH D 46 346 87 HOH HOH . 
AA 5 HOH D 47 347 236 HOH HOH . 
AA 5 HOH D 48 348 142 HOH HOH . 
AA 5 HOH D 49 349 177 HOH HOH . 
AA 5 HOH D 50 350 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . M 2 33.753 26.992 10.131 1 88.65 ? S DMS 203 B 1 
HETATM 2 O O DMS . . . M 2 33.873 25.725 9.33 1 95.12 ? O DMS 203 B 1 
HETATM 3 C C1 DMS . . . M 2 35.089 28.036 9.622 1 80.55 ? C1 DMS 203 B 1 
HETATM 4 C C2 DMS . . . M 2 34.352 26.549 11.73 1 96.21 ? C2 DMS 203 B 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#