data_7H9N # _model_server_result.job_id N8_0OUjlhpjyBlYU-6dW1w _model_server_result.datetime_utc '2025-07-27 05:42:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7h9n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7H9N # _exptl.entry_id 7H9N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 220.291 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(2-phenylethyl)-2-sulfanylideneimidazolidin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7H9N _cell.length_a 70.03 _cell.length_b 89.3 _cell.length_c 97.98 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H9N _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H12 N2 O S' _chem_comp.formula_weight 220.291 _chem_comp.id A1AXZ _chem_comp.mon_nstd_flag . _chem_comp.name 3-(2-phenylethyl)-2-sulfanylideneimidazolidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 A1AXZ doub 1 n n C1 C2 A1AXZ sing 2 n n C2 N1 A1AXZ sing 3 n n N1 C3 A1AXZ sing 4 n n C3 S1 A1AXZ doub 5 n n C3 N2 A1AXZ sing 6 n n N2 C4 A1AXZ sing 7 n n C4 C5 A1AXZ sing 8 n n C5 C6 A1AXZ sing 9 n n C6 C7 A1AXZ doub 10 n y C7 C8 A1AXZ sing 11 n y C8 C9 A1AXZ doub 12 n y C9 C10 A1AXZ sing 13 n y C10 C11 A1AXZ doub 14 n y C1 N2 A1AXZ sing 15 n n C6 C11 A1AXZ sing 16 n y C10 H11 A1AXZ sing 17 n n C11 H12 A1AXZ sing 18 n n C2 H1 A1AXZ sing 19 n n C2 H2 A1AXZ sing 20 n n C4 H4 A1AXZ sing 21 n n C4 H5 A1AXZ sing 22 n n C5 H7 A1AXZ sing 23 n n C5 H6 A1AXZ sing 24 n n C7 H8 A1AXZ sing 25 n n C8 H9 A1AXZ sing 26 n n C9 H10 A1AXZ sing 27 n n N1 H3 A1AXZ sing 28 n n # _atom_sites.entry_id 7H9N _atom_sites.fract_transf_matrix[1][1] 0.01428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1AXZ A 1 301 301 A1AXZ CO5 . C 3 HOH A 1 401 10 HOH HOH . C 3 HOH A 2 402 20 HOH HOH . C 3 HOH A 3 403 19 HOH HOH . C 3 HOH A 4 404 4 HOH HOH . C 3 HOH A 5 405 18 HOH HOH . C 3 HOH A 6 406 27 HOH HOH . C 3 HOH A 7 407 6 HOH HOH . C 3 HOH A 8 408 2 HOH HOH . C 3 HOH A 9 409 9 HOH HOH . C 3 HOH A 10 410 17 HOH HOH . C 3 HOH A 11 411 11 HOH HOH . C 3 HOH A 12 412 8 HOH HOH . C 3 HOH A 13 413 25 HOH HOH . C 3 HOH A 14 414 28 HOH HOH . C 3 HOH A 15 415 30 HOH HOH . C 3 HOH A 16 416 5 HOH HOH . C 3 HOH A 17 417 3 HOH HOH . C 3 HOH A 18 418 7 HOH HOH . C 3 HOH A 19 419 24 HOH HOH . C 3 HOH A 20 420 22 HOH HOH . C 3 HOH A 21 421 36 HOH HOH . C 3 HOH A 22 422 41 HOH HOH . C 3 HOH A 23 423 38 HOH HOH . C 3 HOH A 24 424 23 HOH HOH . C 3 HOH A 25 425 40 HOH HOH . C 3 HOH A 26 426 43 HOH HOH . C 3 HOH A 27 427 15 HOH HOH . C 3 HOH A 28 428 13 HOH HOH . C 3 HOH A 29 429 33 HOH HOH . C 3 HOH A 30 430 39 HOH HOH . C 3 HOH A 31 431 37 HOH HOH . C 3 HOH A 32 432 29 HOH HOH . C 3 HOH A 33 433 14 HOH HOH . C 3 HOH A 34 434 21 HOH HOH . C 3 HOH A 35 435 12 HOH HOH . C 3 HOH A 36 436 1 HOH HOH . C 3 HOH A 37 437 42 HOH HOH . C 3 HOH A 38 438 46 HOH HOH . C 3 HOH A 39 439 32 HOH HOH . C 3 HOH A 40 440 45 HOH HOH . C 3 HOH A 41 441 16 HOH HOH . C 3 HOH A 42 442 26 HOH HOH . C 3 HOH A 43 443 35 HOH HOH . C 3 HOH A 44 444 31 HOH HOH . C 3 HOH A 45 445 44 HOH HOH . C 3 HOH A 46 446 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 A1AXZ . . . B 2 10.509 30.71 25.441 0.96 73.43 ? O1 A1AXZ 301 A 1 HETATM 2 C C1 A1AXZ . . . B 2 9.873 30.514 24.424 0.96 66.47 ? C1 A1AXZ 301 A 1 HETATM 3 C C10 A1AXZ . . . B 2 5.388 28.824 29.435 0.96 57.42 ? C10 A1AXZ 301 A 1 HETATM 4 C C11 A1AXZ . . . B 2 6.528 28.923 28.654 0.96 56.3 ? C11 A1AXZ 301 A 1 HETATM 5 C C2 A1AXZ . . . B 2 10.385 30.373 23.007 0.96 61.73 ? C2 A1AXZ 301 A 1 HETATM 6 C C3 A1AXZ . . . B 2 8.075 30.139 23.052 0.96 63.75 ? C3 A1AXZ 301 A 1 HETATM 7 C C4 A1AXZ . . . B 2 7.587 30.594 25.489 0.96 69.87 ? C4 A1AXZ 301 A 1 HETATM 8 C C5 A1AXZ . . . B 2 7.681 29.444 26.478 0.96 66.59 ? C5 A1AXZ 301 A 1 HETATM 9 C C6 A1AXZ . . . B 2 6.451 29.356 27.337 0.96 63.46 ? C6 A1AXZ 301 A 1 HETATM 10 C C7 A1AXZ . . . B 2 5.201 29.693 26.829 0.96 63.49 ? C7 A1AXZ 301 A 1 HETATM 11 C C8 A1AXZ . . . B 2 4.066 29.594 27.617 0.96 52.24 ? C8 A1AXZ 301 A 1 HETATM 12 C C9 A1AXZ . . . B 2 4.16 29.159 28.916 0.96 55.16 ? C9 A1AXZ 301 A 1 HETATM 13 N N1 A1AXZ . . . B 2 9.158 30.131 22.271 0.96 68.11 ? N1 A1AXZ 301 A 1 HETATM 14 N N2 A1AXZ . . . B 2 8.5 30.44 24.349 0.96 60.96 ? N2 A1AXZ 301 A 1 HETATM 15 S S1 A1AXZ . . . B 2 6.503 29.901 22.592 0.96 101.58 ? S1 A1AXZ 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #