data_7HAL # _model_server_result.job_id NFtegfBRYvsVtat-uEqijA _model_server_result.datetime_utc '2025-07-29 16:57:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hal # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7HAL # _exptl.entry_id 7HAL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 187.241 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(piperidin-1-yl)pyridine-4-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HAL _cell.length_a 66.89 _cell.length_b 91.42 _cell.length_c 99.36 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HAL _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H13 N3' _chem_comp.formula_weight 187.241 _chem_comp.id A1AX4 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(piperidin-1-yl)pyridine-4-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 A1AX4 trip 1 n n C1 C2 A1AX4 sing 2 n n C2 C3 A1AX4 doub 3 n y C2 C6 A1AX4 sing 4 n y C3 C4 A1AX4 sing 5 n y C4 N2 A1AX4 doub 6 n y N2 C5 A1AX4 sing 7 n y C5 C6 A1AX4 doub 8 n y C5 N3 A1AX4 sing 9 n n N3 C7 A1AX4 sing 10 n n N3 C11 A1AX4 sing 11 n n C7 C8 A1AX4 sing 12 n n C8 C9 A1AX4 sing 13 n n C9 C10 A1AX4 sing 14 n n C10 C11 A1AX4 sing 15 n n C10 H103 A1AX4 sing 16 n n C10 H102 A1AX4 sing 17 n n C11 H112 A1AX4 sing 18 n n C11 H113 A1AX4 sing 19 n n C3 H3 A1AX4 sing 20 n n C4 H4 A1AX4 sing 21 n n C6 H6 A1AX4 sing 22 n n C7 H72 A1AX4 sing 23 n n C7 H73 A1AX4 sing 24 n n C8 H83 A1AX4 sing 25 n n C8 H82 A1AX4 sing 26 n n C9 H93 A1AX4 sing 27 n n C9 H92 A1AX4 sing 28 n n # _atom_sites.entry_id 7HAL _atom_sites.fract_transf_matrix[1][1] 0.01495 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010064 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1AX4 A 1 301 301 A1AX4 E7O . C 3 HOH A 1 401 271 HOH HOH . C 3 HOH A 2 402 162 HOH HOH . C 3 HOH A 3 403 205 HOH HOH . C 3 HOH A 4 404 216 HOH HOH . C 3 HOH A 5 405 177 HOH HOH . C 3 HOH A 6 406 270 HOH HOH . C 3 HOH A 7 407 219 HOH HOH . C 3 HOH A 8 408 172 HOH HOH . C 3 HOH A 9 409 234 HOH HOH . C 3 HOH A 10 410 63 HOH HOH . C 3 HOH A 11 411 196 HOH HOH . C 3 HOH A 12 412 208 HOH HOH . C 3 HOH A 13 413 237 HOH HOH . C 3 HOH A 14 414 38 HOH HOH . C 3 HOH A 15 415 114 HOH HOH . C 3 HOH A 16 416 34 HOH HOH . C 3 HOH A 17 417 107 HOH HOH . C 3 HOH A 18 418 18 HOH HOH . C 3 HOH A 19 419 211 HOH HOH . C 3 HOH A 20 420 54 HOH HOH . C 3 HOH A 21 421 202 HOH HOH . C 3 HOH A 22 422 109 HOH HOH . C 3 HOH A 23 423 74 HOH HOH . C 3 HOH A 24 424 189 HOH HOH . C 3 HOH A 25 425 46 HOH HOH . C 3 HOH A 26 426 117 HOH HOH . C 3 HOH A 27 427 6 HOH HOH . C 3 HOH A 28 428 151 HOH HOH . C 3 HOH A 29 429 165 HOH HOH . C 3 HOH A 30 430 204 HOH HOH . C 3 HOH A 31 431 276 HOH HOH . C 3 HOH A 32 432 69 HOH HOH . C 3 HOH A 33 433 22 HOH HOH . C 3 HOH A 34 434 206 HOH HOH . C 3 HOH A 35 435 278 HOH HOH . C 3 HOH A 36 436 105 HOH HOH . C 3 HOH A 37 437 171 HOH HOH . C 3 HOH A 38 438 41 HOH HOH . C 3 HOH A 39 439 16 HOH HOH . C 3 HOH A 40 440 71 HOH HOH . C 3 HOH A 41 441 225 HOH HOH . C 3 HOH A 42 442 40 HOH HOH . C 3 HOH A 43 443 185 HOH HOH . C 3 HOH A 44 444 11 HOH HOH . C 3 HOH A 45 445 147 HOH HOH . C 3 HOH A 46 446 26 HOH HOH . C 3 HOH A 47 447 1 HOH HOH . C 3 HOH A 48 448 2 HOH HOH . C 3 HOH A 49 449 192 HOH HOH . C 3 HOH A 50 450 20 HOH HOH . C 3 HOH A 51 451 85 HOH HOH . C 3 HOH A 52 452 110 HOH HOH . C 3 HOH A 53 453 75 HOH HOH . C 3 HOH A 54 454 86 HOH HOH . C 3 HOH A 55 455 160 HOH HOH . C 3 HOH A 56 456 14 HOH HOH . C 3 HOH A 57 457 4 HOH HOH . C 3 HOH A 58 458 17 HOH HOH . C 3 HOH A 59 459 70 HOH HOH . C 3 HOH A 60 460 195 HOH HOH . C 3 HOH A 61 461 262 HOH HOH . C 3 HOH A 62 462 286 HOH HOH . C 3 HOH A 63 463 67 HOH HOH . C 3 HOH A 64 464 42 HOH HOH . C 3 HOH A 65 465 80 HOH HOH . C 3 HOH A 66 466 152 HOH HOH . C 3 HOH A 67 467 51 HOH HOH . C 3 HOH A 68 468 47 HOH HOH . C 3 HOH A 69 469 106 HOH HOH . C 3 HOH A 70 470 29 HOH HOH . C 3 HOH A 71 471 27 HOH HOH . C 3 HOH A 72 472 82 HOH HOH . C 3 HOH A 73 473 223 HOH HOH . C 3 HOH A 74 474 222 HOH HOH . C 3 HOH A 75 475 5 HOH HOH . C 3 HOH A 76 476 224 HOH HOH . C 3 HOH A 77 477 280 HOH HOH . C 3 HOH A 78 478 3 HOH HOH . C 3 HOH A 79 479 188 HOH HOH . C 3 HOH A 80 480 84 HOH HOH . C 3 HOH A 81 481 127 HOH HOH . C 3 HOH A 82 482 43 HOH HOH . C 3 HOH A 83 483 9 HOH HOH . C 3 HOH A 84 484 44 HOH HOH . C 3 HOH A 85 485 55 HOH HOH . C 3 HOH A 86 486 33 HOH HOH . C 3 HOH A 87 487 130 HOH HOH . C 3 HOH A 88 488 134 HOH HOH . C 3 HOH A 89 489 32 HOH HOH . C 3 HOH A 90 490 148 HOH HOH . C 3 HOH A 91 491 265 HOH HOH . C 3 HOH A 92 492 39 HOH HOH . C 3 HOH A 93 493 24 HOH HOH . C 3 HOH A 94 494 50 HOH HOH . C 3 HOH A 95 495 178 HOH HOH . C 3 HOH A 96 496 104 HOH HOH . C 3 HOH A 97 497 184 HOH HOH . C 3 HOH A 98 498 199 HOH HOH . C 3 HOH A 99 499 53 HOH HOH . C 3 HOH A 100 500 242 HOH HOH . C 3 HOH A 101 501 7 HOH HOH . C 3 HOH A 102 502 268 HOH HOH . C 3 HOH A 103 503 65 HOH HOH . C 3 HOH A 104 504 200 HOH HOH . C 3 HOH A 105 505 56 HOH HOH . C 3 HOH A 106 506 97 HOH HOH . C 3 HOH A 107 507 158 HOH HOH . C 3 HOH A 108 508 260 HOH HOH . C 3 HOH A 109 509 94 HOH HOH . C 3 HOH A 110 510 133 HOH HOH . C 3 HOH A 111 511 45 HOH HOH . C 3 HOH A 112 512 122 HOH HOH . C 3 HOH A 113 513 66 HOH HOH . C 3 HOH A 114 514 167 HOH HOH . C 3 HOH A 115 515 143 HOH HOH . C 3 HOH A 116 516 238 HOH HOH . C 3 HOH A 117 517 10 HOH HOH . C 3 HOH A 118 518 76 HOH HOH . C 3 HOH A 119 519 231 HOH HOH . C 3 HOH A 120 520 30 HOH HOH . C 3 HOH A 121 521 161 HOH HOH . C 3 HOH A 122 522 23 HOH HOH . C 3 HOH A 123 523 48 HOH HOH . C 3 HOH A 124 524 35 HOH HOH . C 3 HOH A 125 525 12 HOH HOH . C 3 HOH A 126 526 61 HOH HOH . C 3 HOH A 127 527 99 HOH HOH . C 3 HOH A 128 528 59 HOH HOH . C 3 HOH A 129 529 142 HOH HOH . C 3 HOH A 130 530 81 HOH HOH . C 3 HOH A 131 531 112 HOH HOH . C 3 HOH A 132 532 52 HOH HOH . C 3 HOH A 133 533 236 HOH HOH . C 3 HOH A 134 534 49 HOH HOH . C 3 HOH A 135 535 125 HOH HOH . C 3 HOH A 136 536 246 HOH HOH . C 3 HOH A 137 537 226 HOH HOH . C 3 HOH A 138 538 102 HOH HOH . C 3 HOH A 139 539 232 HOH HOH . C 3 HOH A 140 540 28 HOH HOH . C 3 HOH A 141 541 92 HOH HOH . C 3 HOH A 142 542 194 HOH HOH . C 3 HOH A 143 543 137 HOH HOH . C 3 HOH A 144 544 173 HOH HOH . C 3 HOH A 145 545 57 HOH HOH . C 3 HOH A 146 546 19 HOH HOH . C 3 HOH A 147 547 182 HOH HOH . C 3 HOH A 148 548 116 HOH HOH . C 3 HOH A 149 549 87 HOH HOH . C 3 HOH A 150 550 215 HOH HOH . C 3 HOH A 151 551 58 HOH HOH . C 3 HOH A 152 552 282 HOH HOH . C 3 HOH A 153 553 252 HOH HOH . C 3 HOH A 154 554 88 HOH HOH . C 3 HOH A 155 555 277 HOH HOH . C 3 HOH A 156 556 149 HOH HOH . C 3 HOH A 157 557 73 HOH HOH . C 3 HOH A 158 558 21 HOH HOH . C 3 HOH A 159 559 115 HOH HOH . C 3 HOH A 160 560 25 HOH HOH . C 3 HOH A 161 561 253 HOH HOH . C 3 HOH A 162 562 193 HOH HOH . C 3 HOH A 163 563 245 HOH HOH . C 3 HOH A 164 564 139 HOH HOH . C 3 HOH A 165 565 111 HOH HOH . C 3 HOH A 166 566 132 HOH HOH . C 3 HOH A 167 567 146 HOH HOH . C 3 HOH A 168 568 198 HOH HOH . C 3 HOH A 169 569 37 HOH HOH . C 3 HOH A 170 570 98 HOH HOH . C 3 HOH A 171 571 159 HOH HOH . C 3 HOH A 172 572 144 HOH HOH . C 3 HOH A 173 573 261 HOH HOH . C 3 HOH A 174 574 8 HOH HOH . C 3 HOH A 175 575 141 HOH HOH . C 3 HOH A 176 576 103 HOH HOH . C 3 HOH A 177 577 138 HOH HOH . C 3 HOH A 178 578 249 HOH HOH . C 3 HOH A 179 579 256 HOH HOH . C 3 HOH A 180 580 31 HOH HOH . C 3 HOH A 181 581 36 HOH HOH . C 3 HOH A 182 582 140 HOH HOH . C 3 HOH A 183 583 121 HOH HOH . C 3 HOH A 184 584 72 HOH HOH . C 3 HOH A 185 585 273 HOH HOH . C 3 HOH A 186 586 64 HOH HOH . C 3 HOH A 187 587 183 HOH HOH . C 3 HOH A 188 588 247 HOH HOH . C 3 HOH A 189 589 239 HOH HOH . C 3 HOH A 190 590 15 HOH HOH . C 3 HOH A 191 591 123 HOH HOH . C 3 HOH A 192 592 62 HOH HOH . C 3 HOH A 193 593 227 HOH HOH . C 3 HOH A 194 594 13 HOH HOH . C 3 HOH A 195 595 96 HOH HOH . C 3 HOH A 196 596 235 HOH HOH . C 3 HOH A 197 597 220 HOH HOH . C 3 HOH A 198 598 250 HOH HOH . C 3 HOH A 199 599 285 HOH HOH . C 3 HOH A 200 600 254 HOH HOH . C 3 HOH A 201 601 170 HOH HOH . C 3 HOH A 202 602 269 HOH HOH . C 3 HOH A 203 603 218 HOH HOH . C 3 HOH A 204 604 203 HOH HOH . C 3 HOH A 205 605 259 HOH HOH . C 3 HOH A 206 606 181 HOH HOH . C 3 HOH A 207 607 264 HOH HOH . C 3 HOH A 208 608 108 HOH HOH . C 3 HOH A 209 609 113 HOH HOH . C 3 HOH A 210 610 77 HOH HOH . C 3 HOH A 211 611 279 HOH HOH . C 3 HOH A 212 612 79 HOH HOH . C 3 HOH A 213 613 190 HOH HOH . C 3 HOH A 214 614 263 HOH HOH . C 3 HOH A 215 615 274 HOH HOH . C 3 HOH A 216 616 95 HOH HOH . C 3 HOH A 217 617 266 HOH HOH . C 3 HOH A 218 618 180 HOH HOH . C 3 HOH A 219 619 135 HOH HOH . C 3 HOH A 220 620 155 HOH HOH . C 3 HOH A 221 621 150 HOH HOH . C 3 HOH A 222 622 91 HOH HOH . C 3 HOH A 223 623 89 HOH HOH . C 3 HOH A 224 624 248 HOH HOH . C 3 HOH A 225 625 267 HOH HOH . C 3 HOH A 226 626 230 HOH HOH . C 3 HOH A 227 627 284 HOH HOH . C 3 HOH A 228 628 131 HOH HOH . C 3 HOH A 229 629 126 HOH HOH . C 3 HOH A 230 630 169 HOH HOH . C 3 HOH A 231 631 176 HOH HOH . C 3 HOH A 232 632 166 HOH HOH . C 3 HOH A 233 633 168 HOH HOH . C 3 HOH A 234 634 255 HOH HOH . C 3 HOH A 235 635 156 HOH HOH . C 3 HOH A 236 636 197 HOH HOH . C 3 HOH A 237 637 228 HOH HOH . C 3 HOH A 238 638 233 HOH HOH . C 3 HOH A 239 639 241 HOH HOH . C 3 HOH A 240 640 244 HOH HOH . C 3 HOH A 241 641 60 HOH HOH . C 3 HOH A 242 642 164 HOH HOH . C 3 HOH A 243 643 120 HOH HOH . C 3 HOH A 244 644 83 HOH HOH . C 3 HOH A 245 645 68 HOH HOH . C 3 HOH A 246 646 154 HOH HOH . C 3 HOH A 247 647 157 HOH HOH . C 3 HOH A 248 648 283 HOH HOH . C 3 HOH A 249 649 145 HOH HOH . C 3 HOH A 250 650 214 HOH HOH . C 3 HOH A 251 651 78 HOH HOH . C 3 HOH A 252 652 272 HOH HOH . C 3 HOH A 253 653 118 HOH HOH . C 3 HOH A 254 654 275 HOH HOH . C 3 HOH A 255 655 101 HOH HOH . C 3 HOH A 256 656 251 HOH HOH . C 3 HOH A 257 657 281 HOH HOH . C 3 HOH A 258 658 119 HOH HOH . C 3 HOH A 259 659 243 HOH HOH . C 3 HOH A 260 660 179 HOH HOH . C 3 HOH A 261 661 258 HOH HOH . C 3 HOH A 262 662 128 HOH HOH . C 3 HOH A 263 663 174 HOH HOH . C 3 HOH A 264 664 153 HOH HOH . C 3 HOH A 265 665 175 HOH HOH . C 3 HOH A 266 666 210 HOH HOH . C 3 HOH A 267 667 221 HOH HOH . C 3 HOH A 268 668 212 HOH HOH . C 3 HOH A 269 669 213 HOH HOH . C 3 HOH A 270 670 100 HOH HOH . C 3 HOH A 271 671 191 HOH HOH . C 3 HOH A 272 672 124 HOH HOH . C 3 HOH A 273 673 186 HOH HOH . C 3 HOH A 274 674 209 HOH HOH . C 3 HOH A 275 675 129 HOH HOH . C 3 HOH A 276 676 136 HOH HOH . C 3 HOH A 277 677 207 HOH HOH . C 3 HOH A 278 678 163 HOH HOH . C 3 HOH A 279 679 90 HOH HOH . C 3 HOH A 280 680 217 HOH HOH . C 3 HOH A 281 681 93 HOH HOH . C 3 HOH A 282 682 187 HOH HOH . C 3 HOH A 283 683 229 HOH HOH . C 3 HOH A 284 684 240 HOH HOH . C 3 HOH A 285 685 257 HOH HOH . C 3 HOH A 286 686 201 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1AX4 . . . B 2 7.016 -15.289 -25.685 0.9 29.94 ? C10 A1AX4 301 A 1 HETATM 2 C C1 A1AX4 . . . B 2 7.932 -9.748 -22.156 0.9 52.01 ? C1 A1AX4 301 A 1 HETATM 3 C C11 A1AX4 . . . B 2 7.055 -13.804 -25.415 0.9 38.38 ? C11 A1AX4 301 A 1 HETATM 4 C C2 A1AX4 . . . B 2 6.817 -10.328 -22.852 0.9 42.84 ? C2 A1AX4 301 A 1 HETATM 5 C C3 A1AX4 . . . B 2 5.586 -9.688 -22.863 0.9 50.47 ? C3 A1AX4 301 A 1 HETATM 6 C C4 A1AX4 . . . B 2 4.53 -10.32 -23.495 0.9 47.18 ? C4 A1AX4 301 A 1 HETATM 7 C C5 A1AX4 . . . B 2 5.822 -12.148 -24.045 0.9 40.04 ? C5 A1AX4 301 A 1 HETATM 8 C C6 A1AX4 . . . B 2 6.939 -11.58 -23.431 0.9 41.17 ? C6 A1AX4 301 A 1 HETATM 9 C C7 A1AX4 . . . B 2 4.797 -14.353 -24.573 0.9 30.96 ? C7 A1AX4 301 A 1 HETATM 10 C C8 A1AX4 . . . B 2 4.545 -14.972 -25.93 0.9 28.21 ? C8 A1AX4 301 A 1 HETATM 11 C C9 A1AX4 . . . B 2 5.773 -15.693 -26.456 0.9 25.65 ? C9 A1AX4 301 A 1 HETATM 12 N N1 A1AX4 . . . B 2 8.818 -9.289 -21.6 0.9 71.77 ? N1 A1AX4 301 A 1 HETATM 13 N N2 A1AX4 . . . B 2 4.629 -11.53 -24.075 0.9 41.99 ? N2 A1AX4 301 A 1 HETATM 14 N N3 A1AX4 . . . B 2 5.884 -13.378 -24.644 0.9 32.59 ? N3 A1AX4 301 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #