data_7HGV # _model_server_result.job_id jW0QPMmPRjvf6NUqAdoiLg _model_server_result.datetime_utc '2024-11-07 05:38:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hgv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":104}' # _entry.id 7HGV # _exptl.entry_id 7HGV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 157.253 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(3S)-1-(propan-2-yl)piperidin-3-yl]methanol' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HGV _cell.length_a 41.74 _cell.length_b 42.19 _cell.length_c 159.61 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HGV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,N 1 1 B,I,J,K,O 2 1 C,L,M,P 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 K N N ? 4 M N N # _chem_comp.formula 'C9 H19 N O' _chem_comp.formula_weight 157.253 _chem_comp.id A1A33 _chem_comp.mon_nstd_flag . _chem_comp.name '[(3S)-1-(propan-2-yl)piperidin-3-yl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 A1A33 sing 1 n n C2 C1 A1A33 sing 2 n n C1 N A1A33 sing 3 n n N C3 A1A33 sing 4 n n C3 C4 A1A33 sing 5 n n C4 C5 A1A33 sing 6 n n C5 C6 A1A33 sing 7 n n C6 C7 A1A33 sing 8 n n C7 O A1A33 sing 9 n n C8 C6 A1A33 sing 10 n n N C8 A1A33 sing 11 n n C4 H9 A1A33 sing 12 n n C4 H10 A1A33 sing 13 n n C5 H11 A1A33 sing 14 n n C5 H12 A1A33 sing 15 n n C6 H13 A1A33 sing 16 n n C7 H15 A1A33 sing 17 n n C7 H14 A1A33 sing 18 n n C8 H18 A1A33 sing 19 n n C8 H17 A1A33 sing 20 n n O H16 A1A33 sing 21 n n C3 H7 A1A33 sing 22 n n C3 H8 A1A33 sing 23 n n C1 H3 A1A33 sing 24 n n C2 H6 A1A33 sing 25 n n C2 H5 A1A33 sing 26 n n C2 H4 A1A33 sing 27 n n C H2 A1A33 sing 28 n n C H A1A33 sing 29 n n C H1 A1A33 sing 30 n n # _atom_sites.entry_id 7HGV _atom_sites.fract_transf_matrix[1][1] 0.023958 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023702 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006265 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 101 95 SO4 SO4 . E 2 SO4 A 1 102 96 SO4 SO4 . F 3 EDO A 1 103 97 EDO EDO . G 4 A1A33 A 1 104 101 A1A33 LIG . H 2 SO4 A 1 105 4 SO4 SO4 . I 2 SO4 B 1 101 1 SO4 SO4 . J 2 SO4 B 1 102 3 SO4 SO4 . K 4 A1A33 B 1 103 101 A1A33 LIG . L 2 SO4 C 1 101 5 SO4 SO4 . M 4 A1A33 C 1 102 101 A1A33 LIG . N 5 HOH A 1 201 290 HOH HOH . N 5 HOH A 2 202 304 HOH HOH . N 5 HOH A 3 203 202 HOH HOH . N 5 HOH A 4 204 307 HOH HOH . N 5 HOH A 5 205 84 HOH HOH . N 5 HOH A 6 206 339 HOH HOH . N 5 HOH A 7 207 357 HOH HOH . N 5 HOH A 8 208 66 HOH HOH . N 5 HOH A 9 209 95 HOH HOH . N 5 HOH A 10 210 139 HOH HOH . N 5 HOH A 11 211 55 HOH HOH . N 5 HOH A 12 212 293 HOH HOH . N 5 HOH A 13 213 86 HOH HOH . N 5 HOH A 14 214 71 HOH HOH . N 5 HOH A 15 215 91 HOH HOH . N 5 HOH A 16 216 87 HOH HOH . N 5 HOH A 17 217 34 HOH HOH . N 5 HOH A 18 218 199 HOH HOH . N 5 HOH A 19 219 26 HOH HOH . N 5 HOH A 20 220 28 HOH HOH . N 5 HOH A 21 221 289 HOH HOH . N 5 HOH A 22 222 208 HOH HOH . N 5 HOH A 23 223 37 HOH HOH . N 5 HOH A 24 224 7 HOH HOH . N 5 HOH A 25 225 341 HOH HOH . N 5 HOH A 26 226 85 HOH HOH . N 5 HOH A 27 227 260 HOH HOH . N 5 HOH A 28 228 167 HOH HOH . N 5 HOH A 29 229 8 HOH HOH . N 5 HOH A 30 230 363 HOH HOH . N 5 HOH A 31 231 27 HOH HOH . N 5 HOH A 32 232 287 HOH HOH . N 5 HOH A 33 233 179 HOH HOH . N 5 HOH A 34 234 97 HOH HOH . N 5 HOH A 35 235 370 HOH HOH . N 5 HOH A 36 236 23 HOH HOH . N 5 HOH A 37 237 203 HOH HOH . N 5 HOH A 38 238 12 HOH HOH . N 5 HOH A 39 239 47 HOH HOH . N 5 HOH A 40 240 267 HOH HOH . N 5 HOH A 41 241 21 HOH HOH . N 5 HOH A 42 242 32 HOH HOH . N 5 HOH A 43 243 78 HOH HOH . N 5 HOH A 44 244 99 HOH HOH . N 5 HOH A 45 245 297 HOH HOH . N 5 HOH A 46 246 1 HOH HOH . N 5 HOH A 47 247 288 HOH HOH . N 5 HOH A 48 248 188 HOH HOH . N 5 HOH A 49 249 60 HOH HOH . N 5 HOH A 50 250 2 HOH HOH . N 5 HOH A 51 251 94 HOH HOH . N 5 HOH A 52 252 218 HOH HOH . N 5 HOH A 53 253 58 HOH HOH . N 5 HOH A 54 254 274 HOH HOH . N 5 HOH A 55 255 145 HOH HOH . N 5 HOH A 56 256 111 HOH HOH . N 5 HOH A 57 257 190 HOH HOH . N 5 HOH A 58 258 259 HOH HOH . N 5 HOH A 59 259 164 HOH HOH . N 5 HOH A 60 260 131 HOH HOH . N 5 HOH A 61 261 109 HOH HOH . N 5 HOH A 62 262 292 HOH HOH . N 5 HOH A 63 263 300 HOH HOH . N 5 HOH A 64 264 18 HOH HOH . N 5 HOH A 65 265 42 HOH HOH . N 5 HOH A 66 266 20 HOH HOH . N 5 HOH A 67 267 77 HOH HOH . N 5 HOH A 68 268 116 HOH HOH . N 5 HOH A 69 269 93 HOH HOH . N 5 HOH A 70 270 143 HOH HOH . N 5 HOH A 71 271 64 HOH HOH . N 5 HOH A 72 272 14 HOH HOH . N 5 HOH A 73 273 31 HOH HOH . N 5 HOH A 74 274 38 HOH HOH . N 5 HOH A 75 275 222 HOH HOH . N 5 HOH A 76 276 377 HOH HOH . N 5 HOH A 77 277 115 HOH HOH . N 5 HOH A 78 278 301 HOH HOH . N 5 HOH A 79 279 9 HOH HOH . N 5 HOH A 80 280 19 HOH HOH . N 5 HOH A 81 281 73 HOH HOH . N 5 HOH A 82 282 16 HOH HOH . N 5 HOH A 83 283 165 HOH HOH . N 5 HOH A 84 284 368 HOH HOH . N 5 HOH A 85 285 327 HOH HOH . N 5 HOH A 86 286 281 HOH HOH . N 5 HOH A 87 287 152 HOH HOH . N 5 HOH A 88 288 113 HOH HOH . N 5 HOH A 89 289 22 HOH HOH . N 5 HOH A 90 290 318 HOH HOH . N 5 HOH A 91 291 356 HOH HOH . N 5 HOH A 92 292 63 HOH HOH . N 5 HOH A 93 293 338 HOH HOH . N 5 HOH A 94 294 146 HOH HOH . N 5 HOH A 95 295 365 HOH HOH . N 5 HOH A 96 296 270 HOH HOH . N 5 HOH A 97 297 210 HOH HOH . N 5 HOH A 98 298 83 HOH HOH . N 5 HOH A 99 299 185 HOH HOH . N 5 HOH A 100 300 211 HOH HOH . N 5 HOH A 101 301 219 HOH HOH . N 5 HOH A 102 302 347 HOH HOH . N 5 HOH A 103 303 205 HOH HOH . N 5 HOH A 104 304 35 HOH HOH . N 5 HOH A 105 305 57 HOH HOH . N 5 HOH A 106 306 156 HOH HOH . N 5 HOH A 107 307 283 HOH HOH . N 5 HOH A 108 308 75 HOH HOH . N 5 HOH A 109 309 125 HOH HOH . N 5 HOH A 110 310 332 HOH HOH . O 5 HOH B 1 201 350 HOH HOH . O 5 HOH B 2 202 331 HOH HOH . O 5 HOH B 3 203 247 HOH HOH . O 5 HOH B 4 204 89 HOH HOH . O 5 HOH B 5 205 272 HOH HOH . O 5 HOH B 6 206 258 HOH HOH . O 5 HOH B 7 207 123 HOH HOH . O 5 HOH B 8 208 98 HOH HOH . O 5 HOH B 9 209 17 HOH HOH . O 5 HOH B 10 210 69 HOH HOH . O 5 HOH B 11 211 177 HOH HOH . O 5 HOH B 12 212 249 HOH HOH . O 5 HOH B 13 213 224 HOH HOH . O 5 HOH B 14 214 153 HOH HOH . O 5 HOH B 15 215 333 HOH HOH . O 5 HOH B 16 216 242 HOH HOH . O 5 HOH B 17 217 329 HOH HOH . O 5 HOH B 18 218 375 HOH HOH . O 5 HOH B 19 219 337 HOH HOH . O 5 HOH B 20 220 280 HOH HOH . O 5 HOH B 21 221 334 HOH HOH . O 5 HOH B 22 222 371 HOH HOH . O 5 HOH B 23 223 172 HOH HOH . O 5 HOH B 24 224 261 HOH HOH . O 5 HOH B 25 225 10 HOH HOH . O 5 HOH B 26 226 137 HOH HOH . O 5 HOH B 27 227 320 HOH HOH . O 5 HOH B 28 228 54 HOH HOH . O 5 HOH B 29 229 223 HOH HOH . O 5 HOH B 30 230 68 HOH HOH . O 5 HOH B 31 231 5 HOH HOH . O 5 HOH B 32 232 6 HOH HOH . O 5 HOH B 33 233 150 HOH HOH . O 5 HOH B 34 234 315 HOH HOH . O 5 HOH B 35 235 59 HOH HOH . O 5 HOH B 36 236 24 HOH HOH . O 5 HOH B 37 237 215 HOH HOH . O 5 HOH B 38 238 168 HOH HOH . O 5 HOH B 39 239 119 HOH HOH . O 5 HOH B 40 240 355 HOH HOH . O 5 HOH B 41 241 25 HOH HOH . O 5 HOH B 42 242 61 HOH HOH . O 5 HOH B 43 243 117 HOH HOH . O 5 HOH B 44 244 79 HOH HOH . O 5 HOH B 45 245 169 HOH HOH . O 5 HOH B 46 246 101 HOH HOH . O 5 HOH B 47 247 13 HOH HOH . O 5 HOH B 48 248 170 HOH HOH . O 5 HOH B 49 249 74 HOH HOH . O 5 HOH B 50 250 120 HOH HOH . O 5 HOH B 51 251 214 HOH HOH . O 5 HOH B 52 252 345 HOH HOH . O 5 HOH B 53 253 96 HOH HOH . O 5 HOH B 54 254 336 HOH HOH . O 5 HOH B 55 255 197 HOH HOH . O 5 HOH B 56 256 217 HOH HOH . O 5 HOH B 57 257 76 HOH HOH . O 5 HOH B 58 258 335 HOH HOH . O 5 HOH B 59 259 46 HOH HOH . O 5 HOH B 60 260 348 HOH HOH . O 5 HOH B 61 261 72 HOH HOH . O 5 HOH B 62 262 175 HOH HOH . O 5 HOH B 63 263 157 HOH HOH . O 5 HOH B 64 264 44 HOH HOH . O 5 HOH B 65 265 36 HOH HOH . O 5 HOH B 66 266 378 HOH HOH . O 5 HOH B 67 267 182 HOH HOH . O 5 HOH B 68 268 104 HOH HOH . O 5 HOH B 69 269 358 HOH HOH . O 5 HOH B 70 270 279 HOH HOH . O 5 HOH B 71 271 352 HOH HOH . O 5 HOH B 72 272 322 HOH HOH . O 5 HOH B 73 273 303 HOH HOH . O 5 HOH B 74 274 160 HOH HOH . O 5 HOH B 75 275 379 HOH HOH . O 5 HOH B 76 276 291 HOH HOH . O 5 HOH B 77 277 354 HOH HOH . O 5 HOH B 78 278 340 HOH HOH . O 5 HOH B 79 279 163 HOH HOH . O 5 HOH B 80 280 316 HOH HOH . O 5 HOH B 81 281 103 HOH HOH . O 5 HOH B 82 282 201 HOH HOH . O 5 HOH B 83 283 346 HOH HOH . O 5 HOH B 84 284 314 HOH HOH . O 5 HOH B 85 285 362 HOH HOH . O 5 HOH B 86 286 107 HOH HOH . O 5 HOH B 87 287 312 HOH HOH . P 5 HOH C 1 201 254 HOH HOH . P 5 HOH C 2 202 323 HOH HOH . P 5 HOH C 3 203 321 HOH HOH . P 5 HOH C 4 204 161 HOH HOH . P 5 HOH C 5 205 226 HOH HOH . P 5 HOH C 6 206 360 HOH HOH . P 5 HOH C 7 207 118 HOH HOH . P 5 HOH C 8 208 271 HOH HOH . P 5 HOH C 9 209 344 HOH HOH . P 5 HOH C 10 210 317 HOH HOH . P 5 HOH C 11 211 90 HOH HOH . P 5 HOH C 12 212 173 HOH HOH . P 5 HOH C 13 213 142 HOH HOH . P 5 HOH C 14 214 302 HOH HOH . P 5 HOH C 15 215 330 HOH HOH . P 5 HOH C 16 216 132 HOH HOH . P 5 HOH C 17 217 134 HOH HOH . P 5 HOH C 18 218 269 HOH HOH . P 5 HOH C 19 219 126 HOH HOH . P 5 HOH C 20 220 48 HOH HOH . P 5 HOH C 21 221 189 HOH HOH . P 5 HOH C 22 222 82 HOH HOH . P 5 HOH C 23 223 148 HOH HOH . P 5 HOH C 24 224 15 HOH HOH . P 5 HOH C 25 225 374 HOH HOH . P 5 HOH C 26 226 294 HOH HOH . P 5 HOH C 27 227 380 HOH HOH . P 5 HOH C 28 228 284 HOH HOH . P 5 HOH C 29 229 343 HOH HOH . P 5 HOH C 30 230 198 HOH HOH . P 5 HOH C 31 231 275 HOH HOH . P 5 HOH C 32 232 309 HOH HOH . P 5 HOH C 33 233 295 HOH HOH . P 5 HOH C 34 234 102 HOH HOH . P 5 HOH C 35 235 366 HOH HOH . P 5 HOH C 36 236 4 HOH HOH . P 5 HOH C 37 237 41 HOH HOH . P 5 HOH C 38 238 45 HOH HOH . P 5 HOH C 39 239 53 HOH HOH . P 5 HOH C 40 240 351 HOH HOH . P 5 HOH C 41 241 40 HOH HOH . P 5 HOH C 42 242 184 HOH HOH . P 5 HOH C 43 243 43 HOH HOH . P 5 HOH C 44 244 122 HOH HOH . P 5 HOH C 45 245 67 HOH HOH . P 5 HOH C 46 246 49 HOH HOH . P 5 HOH C 47 247 342 HOH HOH . P 5 HOH C 48 248 56 HOH HOH . P 5 HOH C 49 249 209 HOH HOH . P 5 HOH C 50 250 299 HOH HOH . P 5 HOH C 51 251 62 HOH HOH . P 5 HOH C 52 252 151 HOH HOH . P 5 HOH C 53 253 171 HOH HOH . P 5 HOH C 54 254 298 HOH HOH . P 5 HOH C 55 255 328 HOH HOH . P 5 HOH C 56 256 135 HOH HOH . P 5 HOH C 57 257 65 HOH HOH . P 5 HOH C 58 258 149 HOH HOH . P 5 HOH C 59 259 376 HOH HOH . P 5 HOH C 60 260 373 HOH HOH . P 5 HOH C 61 261 130 HOH HOH . P 5 HOH C 62 262 305 HOH HOH . P 5 HOH C 63 263 364 HOH HOH . P 5 HOH C 64 264 319 HOH HOH . P 5 HOH C 65 265 108 HOH HOH . P 5 HOH C 66 266 241 HOH HOH . P 5 HOH C 67 267 369 HOH HOH . P 5 HOH C 68 268 70 HOH HOH . P 5 HOH C 69 269 324 HOH HOH . P 5 HOH C 70 270 372 HOH HOH . P 5 HOH C 71 271 381 HOH HOH . P 5 HOH C 72 272 353 HOH HOH . P 5 HOH C 73 273 361 HOH HOH . P 5 HOH C 74 274 92 HOH HOH . P 5 HOH C 75 275 367 HOH HOH . P 5 HOH C 76 276 246 HOH HOH . P 5 HOH C 77 277 349 HOH HOH . P 5 HOH C 78 278 313 HOH HOH . P 5 HOH C 79 279 206 HOH HOH . P 5 HOH C 80 280 310 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 A1A33 . . . G 4 0.345 -26.701 -5.762 0.6 50.83 ? C4 A1A33 104 A 1 HETATM 2 C C5 A1A33 . . . G 4 1.355 -26.394 -6.86 0.6 53.63 ? C5 A1A33 104 A 1 HETATM 3 C C6 A1A33 . . . G 4 2.201 -25.179 -6.509 0.6 50.07 ? C6 A1A33 104 A 1 HETATM 4 C C7 A1A33 . . . G 4 2.43 -24.067 -7.506 0.6 59.09 ? C7 A1A33 104 A 1 HETATM 5 C C8 A1A33 . . . G 4 1.628 -24.544 -5.256 0.6 51.46 ? C8 A1A33 104 A 1 HETATM 6 O O A1A33 . . . G 4 1.83 -24.377 -8.752 0.6 62.64 ? O A1A33 104 A 1 HETATM 7 C C3 A1A33 . . . G 4 0.989 -26.673 -4.371 0.6 52 ? C3 A1A33 104 A 1 HETATM 8 N N A1A33 . . . G 4 1.832 -25.485 -4.148 0.6 48.3 ? N A1A33 104 A 1 HETATM 9 C C1 A1A33 . . . G 4 2.003 -24.8 -2.854 0.6 42.76 ? C1 A1A33 104 A 1 HETATM 10 C C2 A1A33 . . . G 4 0.794 -24.848 -1.941 0.6 45.74 ? C2 A1A33 104 A 1 HETATM 11 C C A1A33 . . . G 4 3.296 -25.226 -2.198 0.6 27.99 ? C A1A33 104 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #