data_7HLJ # _model_server_result.job_id gMXsflms3zKQS3nfrgFlZQ _model_server_result.datetime_utc '2024-12-01 23:40:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hlj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7HLJ # _exptl.entry_id 7HLJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.272 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-methyl-6-(piperidin-1-yl)pyrimidin-2-yl]methanol' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HLJ _cell.length_a 95.501 _cell.length_b 95.501 _cell.length_c 45.636 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HLJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H17 N3 O' _chem_comp.formula_weight 207.272 _chem_comp.id TU6 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-methyl-6-(piperidin-1-yl)pyrimidin-2-yl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TU6 sing 380 n n C2 C1 TU6 doub 381 n y C2 C3 TU6 sing 382 n y C1 N1 TU6 sing 383 n y C10 C9 TU6 sing 384 n n C10 N2 TU6 sing 385 n n C9 C8 TU6 sing 386 n n N1 C4 TU6 doub 387 n y C3 N2 TU6 sing 388 n n C3 N TU6 doub 389 n y N2 C6 TU6 sing 390 n n C4 N TU6 sing 391 n y C4 C5 TU6 sing 392 n n C8 C7 TU6 sing 393 n n C6 C7 TU6 sing 394 n n C5 O TU6 sing 395 n n C5 H1 TU6 sing 396 n n C5 H2 TU6 sing 397 n n C6 H3 TU6 sing 398 n n C6 H4 TU6 sing 399 n n C7 H5 TU6 sing 400 n n C7 H6 TU6 sing 401 n n C8 H7 TU6 sing 402 n n C8 H8 TU6 sing 403 n n C10 H9 TU6 sing 404 n n C10 H10 TU6 sing 405 n n C H11 TU6 sing 406 n n C H12 TU6 sing 407 n n C H13 TU6 sing 408 n n O H14 TU6 sing 409 n n C2 H15 TU6 sing 410 n n C9 H16 TU6 sing 411 n n C9 H17 TU6 sing 412 n n # _atom_sites.entry_id 7HLJ _atom_sites.fract_transf_matrix[1][1] 0.010471 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010471 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 201 202 EDO EDO . C 3 TU6 B 1 202 203 TU6 LIG . D 4 EPE B 1 203 204 EPE EPE . E 2 EDO B 1 204 305 EDO EDO . F 5 SO4 B 1 205 1 SO4 SO4 . G 6 HOH B 1 301 75 HOH HOH . G 6 HOH B 2 302 29 HOH HOH . G 6 HOH B 3 303 12 HOH HOH . G 6 HOH B 4 304 80 HOH HOH . G 6 HOH B 5 305 4 HOH HOH . G 6 HOH B 6 306 107 HOH HOH . G 6 HOH B 7 307 2 HOH HOH . G 6 HOH B 8 308 1 HOH HOH . G 6 HOH B 9 309 15 HOH HOH . G 6 HOH B 10 310 81 HOH HOH . G 6 HOH B 11 311 26 HOH HOH . G 6 HOH B 12 312 16 HOH HOH . G 6 HOH B 13 313 214 HOH HOH . G 6 HOH B 14 314 89 HOH HOH . G 6 HOH B 15 315 267 HOH HOH . G 6 HOH B 16 316 100 HOH HOH . G 6 HOH B 17 317 27 HOH HOH . G 6 HOH B 18 318 129 HOH HOH . G 6 HOH B 19 319 90 HOH HOH . G 6 HOH B 20 320 211 HOH HOH . G 6 HOH B 21 321 31 HOH HOH . G 6 HOH B 22 322 25 HOH HOH . G 6 HOH B 23 323 40 HOH HOH . G 6 HOH B 24 324 63 HOH HOH . G 6 HOH B 25 325 95 HOH HOH . G 6 HOH B 26 326 66 HOH HOH . G 6 HOH B 27 327 16 HOH HOH . G 6 HOH B 28 328 51 HOH HOH . G 6 HOH B 29 329 11 HOH HOH . G 6 HOH B 30 330 184 HOH HOH . G 6 HOH B 31 331 34 HOH HOH . G 6 HOH B 32 332 19 HOH HOH . G 6 HOH B 33 333 72 HOH HOH . G 6 HOH B 34 334 85 HOH HOH . G 6 HOH B 35 335 18 HOH HOH . G 6 HOH B 36 336 76 HOH HOH . G 6 HOH B 37 337 62 HOH HOH . G 6 HOH B 38 338 21 HOH HOH . G 6 HOH B 39 339 133 HOH HOH . G 6 HOH B 40 340 68 HOH HOH . G 6 HOH B 41 341 73 HOH HOH . G 6 HOH B 42 342 99 HOH HOH . G 6 HOH B 43 343 43 HOH HOH . G 6 HOH B 44 344 33 HOH HOH . G 6 HOH B 45 345 39 HOH HOH . G 6 HOH B 46 346 36 HOH HOH . G 6 HOH B 47 347 86 HOH HOH . G 6 HOH B 48 348 58 HOH HOH . G 6 HOH B 49 349 22 HOH HOH . G 6 HOH B 50 350 7 HOH HOH . G 6 HOH B 51 351 29 HOH HOH . G 6 HOH B 52 352 5 HOH HOH . G 6 HOH B 53 353 2 HOH HOH . G 6 HOH B 54 354 71 HOH HOH . G 6 HOH B 55 355 102 HOH HOH . G 6 HOH B 56 356 157 HOH HOH . G 6 HOH B 57 357 126 HOH HOH . G 6 HOH B 58 358 20 HOH HOH . G 6 HOH B 59 359 55 HOH HOH . G 6 HOH B 60 360 120 HOH HOH . G 6 HOH B 61 361 27 HOH HOH . G 6 HOH B 62 362 172 HOH HOH . G 6 HOH B 63 363 47 HOH HOH . G 6 HOH B 64 364 50 HOH HOH . G 6 HOH B 65 365 10 HOH HOH . G 6 HOH B 66 366 70 HOH HOH . G 6 HOH B 67 367 32 HOH HOH . G 6 HOH B 68 368 60 HOH HOH . G 6 HOH B 69 369 26 HOH HOH . G 6 HOH B 70 370 59 HOH HOH . G 6 HOH B 71 371 33 HOH HOH . G 6 HOH B 72 372 264 HOH HOH . G 6 HOH B 73 373 1 HOH HOH . G 6 HOH B 74 374 10 HOH HOH . G 6 HOH B 75 375 6 HOH HOH . G 6 HOH B 76 376 116 HOH HOH . G 6 HOH B 77 377 32 HOH HOH . G 6 HOH B 78 378 14 HOH HOH . G 6 HOH B 79 379 9 HOH HOH . G 6 HOH B 80 380 4 HOH HOH . G 6 HOH B 81 381 30 HOH HOH . G 6 HOH B 82 382 8 HOH HOH . G 6 HOH B 83 383 61 HOH HOH . G 6 HOH B 84 384 304 HOH HOH . G 6 HOH B 85 385 24 HOH HOH . G 6 HOH B 86 386 281 HOH HOH . G 6 HOH B 87 387 303 HOH HOH . G 6 HOH B 88 388 23 HOH HOH . G 6 HOH B 89 389 64 HOH HOH . G 6 HOH B 90 390 3 HOH HOH . G 6 HOH B 91 391 45 HOH HOH . G 6 HOH B 92 392 12 HOH HOH . G 6 HOH B 93 393 5 HOH HOH . G 6 HOH B 94 394 140 HOH HOH . G 6 HOH B 95 395 3 HOH HOH . G 6 HOH B 96 396 8 HOH HOH . G 6 HOH B 97 397 11 HOH HOH . G 6 HOH B 98 398 97 HOH HOH . G 6 HOH B 99 399 56 HOH HOH . G 6 HOH B 100 400 46 HOH HOH . G 6 HOH B 101 401 93 HOH HOH . G 6 HOH B 102 402 9 HOH HOH . G 6 HOH B 103 403 49 HOH HOH . G 6 HOH B 104 404 42 HOH HOH . G 6 HOH B 105 405 48 HOH HOH . G 6 HOH B 106 406 57 HOH HOH . G 6 HOH B 107 407 22 HOH HOH . G 6 HOH B 108 408 13 HOH HOH . G 6 HOH B 109 409 7 HOH HOH . G 6 HOH B 110 410 112 HOH HOH . G 6 HOH B 111 411 25 HOH HOH . G 6 HOH B 112 412 38 HOH HOH . G 6 HOH B 113 413 137 HOH HOH . G 6 HOH B 114 414 197 HOH HOH . G 6 HOH B 115 415 125 HOH HOH . G 6 HOH B 116 416 15 HOH HOH . G 6 HOH B 117 417 53 HOH HOH . G 6 HOH B 118 418 20 HOH HOH . G 6 HOH B 119 419 19 HOH HOH . G 6 HOH B 120 420 41 HOH HOH . G 6 HOH B 121 421 44 HOH HOH . G 6 HOH B 122 422 69 HOH HOH . G 6 HOH B 123 423 154 HOH HOH . G 6 HOH B 124 424 18 HOH HOH . G 6 HOH B 125 425 54 HOH HOH . G 6 HOH B 126 426 115 HOH HOH . G 6 HOH B 127 427 103 HOH HOH . G 6 HOH B 128 428 30 HOH HOH . G 6 HOH B 129 429 263 HOH HOH . G 6 HOH B 130 430 257 HOH HOH . G 6 HOH B 131 431 266 HOH HOH . G 6 HOH B 132 432 114 HOH HOH . G 6 HOH B 133 433 156 HOH HOH . G 6 HOH B 134 434 17 HOH HOH . G 6 HOH B 135 435 98 HOH HOH . G 6 HOH B 136 436 21 HOH HOH . G 6 HOH B 137 437 23 HOH HOH . G 6 HOH B 138 438 13 HOH HOH . G 6 HOH B 139 439 104 HOH HOH . G 6 HOH B 140 440 166 HOH HOH . G 6 HOH B 141 441 82 HOH HOH . G 6 HOH B 142 442 127 HOH HOH . G 6 HOH B 143 443 205 HOH HOH . G 6 HOH B 144 444 131 HOH HOH . G 6 HOH B 145 445 259 HOH HOH . G 6 HOH B 146 446 14 HOH HOH . G 6 HOH B 147 447 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 TU6 . . . C 3 -44.724 -16.601 -15.312 0.39 26.87 ? N1 TU6 202 B 1 HETATM 2 C C4 TU6 . . . C 3 -44.059 -17.746 -15.142 0.39 26.21 ? C4 TU6 202 B 1 HETATM 3 C C5 TU6 . . . C 3 -44.426 -18.904 -16.027 0.39 27.98 ? C5 TU6 202 B 1 HETATM 4 C C6 TU6 . . . C 3 -40.861 -18.249 -12.654 0.39 29.51 ? C6 TU6 202 B 1 HETATM 5 C C7 TU6 . . . C 3 -40.724 -18.947 -11.322 0.39 30.13 ? C7 TU6 202 B 1 HETATM 6 C C8 TU6 . . . C 3 -40.196 -17.997 -10.267 0.39 29.29 ? C8 TU6 202 B 1 HETATM 7 C C10 TU6 . . . C 3 -41.322 -16.13 -11.529 0.39 29.43 ? C10 TU6 202 B 1 HETATM 8 N N TU6 . . . C 3 -43.095 -17.926 -14.234 0.39 27.01 ? N TU6 202 B 1 HETATM 9 C C TU6 . . . C 3 -45.162 -14.287 -14.769 0.39 27.8 ? C TU6 202 B 1 HETATM 10 O O TU6 . . . C 3 -45.445 -18.528 -16.941 0.39 31.91 ? O TU6 202 B 1 HETATM 11 C C1 TU6 . . . C 3 -44.404 -15.555 -14.537 0.39 26.84 ? C1 TU6 202 B 1 HETATM 12 C C2 TU6 . . . C 3 -43.422 -15.652 -13.594 0.39 26.15 ? C2 TU6 202 B 1 HETATM 13 C C3 TU6 . . . C 3 -42.775 -16.889 -13.436 0.39 26.99 ? C3 TU6 202 B 1 HETATM 14 C C9 TU6 . . . C 3 -41.105 -16.791 -10.177 0.39 30.25 ? C9 TU6 202 B 1 HETATM 15 N N2 TU6 . . . C 3 -41.751 -17.092 -12.551 0.39 28.78 ? N2 TU6 202 B 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 700 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 15 #