data_7HM1 # _model_server_result.job_id NBGKPBRZY42nneV_v4Thrg _model_server_result.datetime_utc '2024-12-03 23:08:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hm1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7HM1 # _exptl.entry_id 7HM1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HM1 _cell.length_a 95.439 _cell.length_b 95.439 _cell.length_c 45.914 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HM1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7HM1 _atom_sites.fract_transf_matrix[1][1] 0.010478 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010478 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VWV B 1 201 201 VWV LIG . C 3 EDO B 1 202 305 EDO EDO . D 4 SO4 B 1 203 1 SO4 SO4 . E 5 HOH B 1 301 85 HOH HOH . E 5 HOH B 2 302 63 HOH HOH . E 5 HOH B 3 303 66 HOH HOH . E 5 HOH B 4 304 29 HOH HOH . E 5 HOH B 5 305 40 HOH HOH . E 5 HOH B 6 306 27 HOH HOH . E 5 HOH B 7 307 4 HOH HOH . E 5 HOH B 8 308 95 HOH HOH . E 5 HOH B 9 309 129 HOH HOH . E 5 HOH B 10 310 25 HOH HOH . E 5 HOH B 11 311 11 HOH HOH . E 5 HOH B 12 312 22 HOH HOH . E 5 HOH B 13 313 72 HOH HOH . E 5 HOH B 14 314 20 HOH HOH . E 5 HOH B 15 315 28 HOH HOH . E 5 HOH B 16 316 137 HOH HOH . E 5 HOH B 17 317 62 HOH HOH . E 5 HOH B 18 318 1 HOH HOH . E 5 HOH B 19 319 304 HOH HOH . E 5 HOH B 20 320 3 HOH HOH . E 5 HOH B 21 321 24 HOH HOH . E 5 HOH B 22 322 8 HOH HOH . E 5 HOH B 23 323 23 HOH HOH . E 5 HOH B 24 324 257 HOH HOH . E 5 HOH B 25 325 25 HOH HOH . E 5 HOH B 26 326 22 HOH HOH . E 5 HOH B 27 327 30 HOH HOH . E 5 HOH B 28 328 120 HOH HOH . E 5 HOH B 29 329 41 HOH HOH . E 5 HOH B 30 330 53 HOH HOH . E 5 HOH B 31 331 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 -50.357 -17.024 -33.317 1 40.74 ? C1 EDO 202 B 1 HETATM 2 O O1 EDO . . . C 3 -49.133 -16.332 -33.25 1 31.88 ? O1 EDO 202 B 1 HETATM 3 C C2 EDO . . . C 3 -50.981 -17.142 -31.995 1 37.72 ? C2 EDO 202 B 1 HETATM 4 O O2 EDO . . . C 3 -51.284 -15.872 -31.503 1 47.11 ? O2 EDO 202 B 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #