data_7HM6 # _model_server_result.job_id DeQ_E8zAzhTVEoWuHp429w _model_server_result.datetime_utc '2025-01-11 03:49:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hm6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7HM6 # _exptl.entry_id 7HM6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HM6 _cell.length_a 95.62 _cell.length_b 95.62 _cell.length_c 45.845 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HM6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 111 n n C1 C2 EDO sing 112 n n C1 H11 EDO sing 113 n n C1 H12 EDO sing 114 n n O1 HO1 EDO sing 115 n n C2 O2 EDO sing 116 n n C2 H21 EDO sing 117 n n C2 H22 EDO sing 118 n n O2 HO2 EDO sing 119 n n # _atom_sites.entry_id 7HM6 _atom_sites.fract_transf_matrix[1][1] 0.010458 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021813 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 201 202 EDO EDO . C 3 A1BDJ B 1 202 302 A1BDJ LIG . D 2 EDO B 1 203 305 EDO EDO . E 4 SO4 B 1 204 1 SO4 SO4 . F 5 HOH B 1 301 12 HOH HOH . F 5 HOH B 2 302 26 HOH HOH . F 5 HOH B 3 303 129 HOH HOH . F 5 HOH B 4 304 27 HOH HOH . F 5 HOH B 5 305 40 HOH HOH . F 5 HOH B 6 306 11 HOH HOH . F 5 HOH B 7 307 22 HOH HOH . F 5 HOH B 8 308 19 HOH HOH . F 5 HOH B 9 309 66 HOH HOH . F 5 HOH B 10 310 86 HOH HOH . F 5 HOH B 11 311 20 HOH HOH . F 5 HOH B 12 312 43 HOH HOH . F 5 HOH B 13 313 62 HOH HOH . F 5 HOH B 14 314 71 HOH HOH . F 5 HOH B 15 315 304 HOH HOH . F 5 HOH B 16 316 281 HOH HOH . F 5 HOH B 17 317 156 HOH HOH . F 5 HOH B 18 318 85 HOH HOH . F 5 HOH B 19 319 267 HOH HOH . F 5 HOH B 20 320 8 HOH HOH . F 5 HOH B 21 321 3 HOH HOH . F 5 HOH B 22 322 264 HOH HOH . F 5 HOH B 23 323 23 HOH HOH . F 5 HOH B 24 324 8 HOH HOH . F 5 HOH B 25 325 30 HOH HOH . F 5 HOH B 26 326 257 HOH HOH . F 5 HOH B 27 327 20 HOH HOH . F 5 HOH B 28 328 69 HOH HOH . F 5 HOH B 29 329 53 HOH HOH . F 5 HOH B 30 330 44 HOH HOH . F 5 HOH B 31 331 22 HOH HOH . F 5 HOH B 32 332 5 HOH HOH . F 5 HOH B 33 333 19 HOH HOH . F 5 HOH B 34 334 18 HOH HOH . F 5 HOH B 35 335 115 HOH HOH . F 5 HOH B 36 336 21 HOH HOH . F 5 HOH B 37 337 23 HOH HOH . F 5 HOH B 38 338 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 -50.706 -16.845 -33.241 1 35.72 ? C1 EDO 203 B 1 HETATM 2 O O1 EDO . . . D 2 -49.36 -16.409 -33.133 1 28.66 ? O1 EDO 203 B 1 HETATM 3 C C2 EDO . . . D 2 -51.305 -17.101 -31.929 1 35.65 ? C2 EDO 203 B 1 HETATM 4 O O2 EDO . . . D 2 -51.586 -15.892 -31.27 1 44.52 ? O2 EDO 203 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #