data_7HM7 # _model_server_result.job_id wMbktQJsJzf-XkYzdORj8A _model_server_result.datetime_utc '2025-01-10 13:10:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hm7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7HM7 # _exptl.entry_id 7HM7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HM7 _cell.length_a 95.452 _cell.length_b 95.452 _cell.length_c 45.76 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HM7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 118 n n N1 C6 EPE sing 119 n n N1 C9 EPE sing 120 n n C2 C3 EPE sing 121 n n C2 H21 EPE sing 122 n n C2 H22 EPE sing 123 n n C3 N4 EPE sing 124 n n C3 H31 EPE sing 125 n n C3 H32 EPE sing 126 n n N4 C5 EPE sing 127 n n N4 C7 EPE sing 128 n n C5 C6 EPE sing 129 n n C5 H51 EPE sing 130 n n C5 H52 EPE sing 131 n n C6 H61 EPE sing 132 n n C6 H62 EPE sing 133 n n C7 C8 EPE sing 134 n n C7 H71 EPE sing 135 n n C7 H72 EPE sing 136 n n C8 O8 EPE sing 137 n n C8 H81 EPE sing 138 n n C8 H82 EPE sing 139 n n O8 HO8 EPE sing 140 n n C9 C10 EPE sing 141 n n C9 H91 EPE sing 142 n n C9 H92 EPE sing 143 n n C10 S EPE sing 144 n n C10 H101 EPE sing 145 n n C10 H102 EPE sing 146 n n S O1S EPE doub 147 n n S O2S EPE doub 148 n n S O3S EPE sing 149 n n O3S HOS3 EPE sing 150 n n # _atom_sites.entry_id 7HM7 _atom_sites.fract_transf_matrix[1][1] 0.010476 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010476 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 201 202 EDO EDO . C 3 A1BFH B 1 202 302 A1BFH LIG . D 4 EPE B 1 203 401 EPE EPE . E 2 EDO B 1 204 305 EDO EDO . F 5 SO4 B 1 205 1 SO4 SO4 . G 6 HOH B 1 301 107 HOH HOH . G 6 HOH B 2 302 29 HOH HOH . G 6 HOH B 3 303 2 HOH HOH . G 6 HOH B 4 304 11 HOH HOH . G 6 HOH B 5 305 1 HOH HOH . G 6 HOH B 6 306 99 HOH HOH . G 6 HOH B 7 307 21 HOH HOH . G 6 HOH B 8 308 12 HOH HOH . G 6 HOH B 9 309 184 HOH HOH . G 6 HOH B 10 310 33 HOH HOH . G 6 HOH B 11 311 26 HOH HOH . G 6 HOH B 12 312 16 HOH HOH . G 6 HOH B 13 313 4 HOH HOH . G 6 HOH B 14 314 63 HOH HOH . G 6 HOH B 15 315 51 HOH HOH . G 6 HOH B 16 316 80 HOH HOH . G 6 HOH B 17 317 40 HOH HOH . G 6 HOH B 18 318 90 HOH HOH . G 6 HOH B 19 319 5 HOH HOH . G 6 HOH B 20 320 27 HOH HOH . G 6 HOH B 21 321 95 HOH HOH . G 6 HOH B 22 322 102 HOH HOH . G 6 HOH B 23 323 25 HOH HOH . G 6 HOH B 24 324 16 HOH HOH . G 6 HOH B 25 325 31 HOH HOH . G 6 HOH B 26 326 11 HOH HOH . G 6 HOH B 27 327 211 HOH HOH . G 6 HOH B 28 328 10 HOH HOH . G 6 HOH B 29 329 34 HOH HOH . G 6 HOH B 30 330 129 HOH HOH . G 6 HOH B 31 331 39 HOH HOH . G 6 HOH B 32 332 72 HOH HOH . G 6 HOH B 33 333 36 HOH HOH . G 6 HOH B 34 334 55 HOH HOH . G 6 HOH B 35 335 20 HOH HOH . G 6 HOH B 36 336 100 HOH HOH . G 6 HOH B 37 337 18 HOH HOH . G 6 HOH B 38 338 68 HOH HOH . G 6 HOH B 39 339 2 HOH HOH . G 6 HOH B 40 340 32 HOH HOH . G 6 HOH B 41 341 58 HOH HOH . G 6 HOH B 42 342 70 HOH HOH . G 6 HOH B 43 343 62 HOH HOH . G 6 HOH B 44 344 9 HOH HOH . G 6 HOH B 45 345 157 HOH HOH . G 6 HOH B 46 346 7 HOH HOH . G 6 HOH B 47 347 22 HOH HOH . G 6 HOH B 48 348 19 HOH HOH . G 6 HOH B 49 349 66 HOH HOH . G 6 HOH B 50 350 126 HOH HOH . G 6 HOH B 51 351 50 HOH HOH . G 6 HOH B 52 352 27 HOH HOH . G 6 HOH B 53 353 59 HOH HOH . G 6 HOH B 54 354 73 HOH HOH . G 6 HOH B 55 355 15 HOH HOH . G 6 HOH B 56 356 81 HOH HOH . G 6 HOH B 57 357 10 HOH HOH . G 6 HOH B 58 358 26 HOH HOH . G 6 HOH B 59 359 29 HOH HOH . G 6 HOH B 60 360 76 HOH HOH . G 6 HOH B 61 361 267 HOH HOH . G 6 HOH B 62 362 61 HOH HOH . G 6 HOH B 63 363 93 HOH HOH . G 6 HOH B 64 364 86 HOH HOH . G 6 HOH B 65 365 89 HOH HOH . G 6 HOH B 66 366 4 HOH HOH . G 6 HOH B 67 367 64 HOH HOH . G 6 HOH B 68 368 1 HOH HOH . G 6 HOH B 69 369 281 HOH HOH . G 6 HOH B 70 370 6 HOH HOH . G 6 HOH B 71 371 43 HOH HOH . G 6 HOH B 72 372 156 HOH HOH . G 6 HOH B 73 373 47 HOH HOH . G 6 HOH B 74 374 304 HOH HOH . G 6 HOH B 75 375 71 HOH HOH . G 6 HOH B 76 376 3 HOH HOH . G 6 HOH B 77 377 25 HOH HOH . G 6 HOH B 78 378 24 HOH HOH . G 6 HOH B 79 379 172 HOH HOH . G 6 HOH B 80 380 112 HOH HOH . G 6 HOH B 81 381 14 HOH HOH . G 6 HOH B 82 382 137 HOH HOH . G 6 HOH B 83 383 8 HOH HOH . G 6 HOH B 84 384 32 HOH HOH . G 6 HOH B 85 385 125 HOH HOH . G 6 HOH B 86 386 13 HOH HOH . G 6 HOH B 87 387 33 HOH HOH . G 6 HOH B 88 388 85 HOH HOH . G 6 HOH B 89 389 3 HOH HOH . G 6 HOH B 90 390 82 HOH HOH . G 6 HOH B 91 391 264 HOH HOH . G 6 HOH B 92 392 46 HOH HOH . G 6 HOH B 93 393 214 HOH HOH . G 6 HOH B 94 394 8 HOH HOH . G 6 HOH B 95 395 303 HOH HOH . G 6 HOH B 96 396 48 HOH HOH . G 6 HOH B 97 397 17 HOH HOH . G 6 HOH B 98 398 12 HOH HOH . G 6 HOH B 99 399 97 HOH HOH . G 6 HOH B 100 400 23 HOH HOH . G 6 HOH B 101 401 30 HOH HOH . G 6 HOH B 102 402 56 HOH HOH . G 6 HOH B 103 403 197 HOH HOH . G 6 HOH B 104 404 49 HOH HOH . G 6 HOH B 105 405 60 HOH HOH . G 6 HOH B 106 406 45 HOH HOH . G 6 HOH B 107 407 42 HOH HOH . G 6 HOH B 108 408 5 HOH HOH . G 6 HOH B 109 409 20 HOH HOH . G 6 HOH B 110 410 103 HOH HOH . G 6 HOH B 111 411 7 HOH HOH . G 6 HOH B 112 412 263 HOH HOH . G 6 HOH B 113 413 34 HOH HOH . G 6 HOH B 114 414 54 HOH HOH . G 6 HOH B 115 415 18 HOH HOH . G 6 HOH B 116 416 257 HOH HOH . G 6 HOH B 117 417 15 HOH HOH . G 6 HOH B 118 418 154 HOH HOH . G 6 HOH B 119 419 57 HOH HOH . G 6 HOH B 120 420 38 HOH HOH . G 6 HOH B 121 421 22 HOH HOH . G 6 HOH B 122 422 53 HOH HOH . G 6 HOH B 123 423 140 HOH HOH . G 6 HOH B 124 424 44 HOH HOH . G 6 HOH B 125 425 41 HOH HOH . G 6 HOH B 126 426 69 HOH HOH . G 6 HOH B 127 427 19 HOH HOH . G 6 HOH B 128 428 30 HOH HOH . G 6 HOH B 129 429 266 HOH HOH . G 6 HOH B 130 430 114 HOH HOH . G 6 HOH B 131 431 133 HOH HOH . G 6 HOH B 132 432 115 HOH HOH . G 6 HOH B 133 433 23 HOH HOH . G 6 HOH B 134 434 13 HOH HOH . G 6 HOH B 135 435 21 HOH HOH . G 6 HOH B 136 436 98 HOH HOH . G 6 HOH B 137 437 104 HOH HOH . G 6 HOH B 138 438 205 HOH HOH . G 6 HOH B 139 439 166 HOH HOH . G 6 HOH B 140 440 127 HOH HOH . G 6 HOH B 141 441 14 HOH HOH . G 6 HOH B 142 442 131 HOH HOH . G 6 HOH B 143 443 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . D 4 -38.892 -15.537 -19.155 0.68 17.24 ? N1 EPE 203 B 1 HETATM 2 C C2 EPE . . . D 4 -38.673 -14.754 -20.387 0.68 17.04 ? C2 EPE 203 B 1 HETATM 3 C C3 EPE . . . D 4 -38.791 -13.263 -20.149 0.68 15.49 ? C3 EPE 203 B 1 HETATM 4 N N4 EPE . . . D 4 -37.893 -12.792 -19.083 0.68 14.07 ? N4 EPE 203 B 1 HETATM 5 C C5 EPE . . . D 4 -38.092 -13.603 -17.87 0.68 14.42 ? C5 EPE 203 B 1 HETATM 6 C C6 EPE . . . D 4 -37.947 -15.071 -18.145 0.68 16.92 ? C6 EPE 203 B 1 HETATM 7 C C7 EPE . . . D 4 -38.066 -11.381 -18.744 0.68 14.36 ? C7 EPE 203 B 1 HETATM 8 C C8 EPE . . . D 4 -37.799 -10.404 -19.855 0.68 13.63 ? C8 EPE 203 B 1 HETATM 9 O O8 EPE . . . D 4 -38.886 -10.322 -20.763 0.68 13.63 ? O8 EPE 203 B 1 HETATM 10 C C9 EPE . . . D 4 -38.677 -16.989 -19.391 0.68 19.32 ? C9 EPE 203 B 1 HETATM 11 C C10 EPE . . . D 4 -39.814 -17.682 -20.129 0.68 19.2 ? C10 EPE 203 B 1 HETATM 12 S S EPE . . . D 4 -39.467 -19.379 -20.536 0.68 19.83 ? S EPE 203 B 1 HETATM 13 O O1S EPE . . . D 4 -40.515 -19.759 -21.433 0.68 20.22 ? O1S EPE 203 B 1 HETATM 14 O O2S EPE . . . D 4 -38.143 -19.377 -21.102 0.68 19.57 ? O2S EPE 203 B 1 HETATM 15 O O3S EPE . . . D 4 -39.587 -20.082 -19.179 0.68 22.55 ? O3S EPE 203 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #