data_7HM8 # _model_server_result.job_id BUTs707hAqDfcCGveUci_Q _model_server_result.datetime_utc '2024-11-28 14:37:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hm8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7HM8 # _exptl.entry_id 7HM8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HM8 _cell.length_a 95.639 _cell.length_b 95.639 _cell.length_c 45.82 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HM8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 92 n n N1 C6 EPE sing 93 n n N1 C9 EPE sing 94 n n C2 C3 EPE sing 95 n n C2 H21 EPE sing 96 n n C2 H22 EPE sing 97 n n C3 N4 EPE sing 98 n n C3 H31 EPE sing 99 n n C3 H32 EPE sing 100 n n N4 C5 EPE sing 101 n n N4 C7 EPE sing 102 n n C5 C6 EPE sing 103 n n C5 H51 EPE sing 104 n n C5 H52 EPE sing 105 n n C6 H61 EPE sing 106 n n C6 H62 EPE sing 107 n n C7 C8 EPE sing 108 n n C7 H71 EPE sing 109 n n C7 H72 EPE sing 110 n n C8 O8 EPE sing 111 n n C8 H81 EPE sing 112 n n C8 H82 EPE sing 113 n n O8 HO8 EPE sing 114 n n C9 C10 EPE sing 115 n n C9 H91 EPE sing 116 n n C9 H92 EPE sing 117 n n C10 S EPE sing 118 n n C10 H101 EPE sing 119 n n C10 H102 EPE sing 120 n n S O1S EPE doub 121 n n S O2S EPE doub 122 n n S O3S EPE sing 123 n n O3S HOS3 EPE sing 124 n n # _atom_sites.entry_id 7HM8 _atom_sites.fract_transf_matrix[1][1] 0.010456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010456 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021825 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 201 202 EDO EDO . C 3 UVA B 1 202 301 UVA LIG . D 4 EPE B 1 203 302 EPE EPE . E 2 EDO B 1 204 305 EDO EDO . F 5 SO4 B 1 205 1 SO4 SO4 . G 6 HOH B 1 301 12 HOH HOH . G 6 HOH B 2 302 2 HOH HOH . G 6 HOH B 3 303 11 HOH HOH . G 6 HOH B 4 304 129 HOH HOH . G 6 HOH B 5 305 29 HOH HOH . G 6 HOH B 6 306 99 HOH HOH . G 6 HOH B 7 307 107 HOH HOH . G 6 HOH B 8 308 26 HOH HOH . G 6 HOH B 9 309 21 HOH HOH . G 6 HOH B 10 310 1 HOH HOH . G 6 HOH B 11 311 40 HOH HOH . G 6 HOH B 12 312 63 HOH HOH . G 6 HOH B 13 313 281 HOH HOH . G 6 HOH B 14 314 33 HOH HOH . G 6 HOH B 15 315 120 HOH HOH . G 6 HOH B 16 316 16 HOH HOH . G 6 HOH B 17 317 27 HOH HOH . G 6 HOH B 18 318 9 HOH HOH . G 6 HOH B 19 319 4 HOH HOH . G 6 HOH B 20 320 90 HOH HOH . G 6 HOH B 21 321 31 HOH HOH . G 6 HOH B 22 322 51 HOH HOH . G 6 HOH B 23 323 102 HOH HOH . G 6 HOH B 24 324 25 HOH HOH . G 6 HOH B 25 325 80 HOH HOH . G 6 HOH B 26 326 5 HOH HOH . G 6 HOH B 27 327 184 HOH HOH . G 6 HOH B 28 328 95 HOH HOH . G 6 HOH B 29 329 11 HOH HOH . G 6 HOH B 30 330 100 HOH HOH . G 6 HOH B 31 331 16 HOH HOH . G 6 HOH B 32 332 34 HOH HOH . G 6 HOH B 33 333 66 HOH HOH . G 6 HOH B 34 334 10 HOH HOH . G 6 HOH B 35 335 39 HOH HOH . G 6 HOH B 36 336 36 HOH HOH . G 6 HOH B 37 337 89 HOH HOH . G 6 HOH B 38 338 55 HOH HOH . G 6 HOH B 39 339 27 HOH HOH . G 6 HOH B 40 340 72 HOH HOH . G 6 HOH B 41 341 86 HOH HOH . G 6 HOH B 42 342 62 HOH HOH . G 6 HOH B 43 343 19 HOH HOH . G 6 HOH B 44 344 20 HOH HOH . G 6 HOH B 45 345 22 HOH HOH . G 6 HOH B 46 346 70 HOH HOH . G 6 HOH B 47 347 7 HOH HOH . G 6 HOH B 48 348 264 HOH HOH . G 6 HOH B 49 349 68 HOH HOH . G 6 HOH B 50 350 2 HOH HOH . G 6 HOH B 51 351 211 HOH HOH . G 6 HOH B 52 352 58 HOH HOH . G 6 HOH B 53 353 29 HOH HOH . G 6 HOH B 54 354 116 HOH HOH . G 6 HOH B 55 355 137 HOH HOH . G 6 HOH B 56 356 81 HOH HOH . G 6 HOH B 57 357 157 HOH HOH . G 6 HOH B 58 358 76 HOH HOH . G 6 HOH B 59 359 18 HOH HOH . G 6 HOH B 60 360 43 HOH HOH . G 6 HOH B 61 361 50 HOH HOH . G 6 HOH B 62 362 10 HOH HOH . G 6 HOH B 63 363 59 HOH HOH . G 6 HOH B 64 364 156 HOH HOH . G 6 HOH B 65 365 15 HOH HOH . G 6 HOH B 66 366 26 HOH HOH . G 6 HOH B 67 367 267 HOH HOH . G 6 HOH B 68 368 6 HOH HOH . G 6 HOH B 69 369 172 HOH HOH . G 6 HOH B 70 370 126 HOH HOH . G 6 HOH B 71 371 61 HOH HOH . G 6 HOH B 72 372 93 HOH HOH . G 6 HOH B 73 373 71 HOH HOH . G 6 HOH B 74 374 47 HOH HOH . G 6 HOH B 75 375 4 HOH HOH . G 6 HOH B 76 376 304 HOH HOH . G 6 HOH B 77 377 14 HOH HOH . G 6 HOH B 78 378 32 HOH HOH . G 6 HOH B 79 379 1 HOH HOH . G 6 HOH B 80 380 3 HOH HOH . G 6 HOH B 81 381 73 HOH HOH . G 6 HOH B 82 382 33 HOH HOH . G 6 HOH B 83 383 24 HOH HOH . G 6 HOH B 84 384 8 HOH HOH . G 6 HOH B 85 385 32 HOH HOH . G 6 HOH B 86 386 3 HOH HOH . G 6 HOH B 87 387 30 HOH HOH . G 6 HOH B 88 388 64 HOH HOH . G 6 HOH B 89 389 214 HOH HOH . G 6 HOH B 90 390 17 HOH HOH . G 6 HOH B 91 391 42 HOH HOH . G 6 HOH B 92 392 12 HOH HOH . G 6 HOH B 93 393 5 HOH HOH . G 6 HOH B 94 394 85 HOH HOH . G 6 HOH B 95 395 46 HOH HOH . G 6 HOH B 96 396 25 HOH HOH . G 6 HOH B 97 397 49 HOH HOH . G 6 HOH B 98 398 197 HOH HOH . G 6 HOH B 99 399 97 HOH HOH . G 6 HOH B 100 400 303 HOH HOH . G 6 HOH B 101 401 23 HOH HOH . G 6 HOH B 102 402 263 HOH HOH . G 6 HOH B 103 403 48 HOH HOH . G 6 HOH B 104 404 60 HOH HOH . G 6 HOH B 105 405 56 HOH HOH . G 6 HOH B 106 406 125 HOH HOH . G 6 HOH B 107 407 8 HOH HOH . G 6 HOH B 108 408 20 HOH HOH . G 6 HOH B 109 409 140 HOH HOH . G 6 HOH B 110 410 13 HOH HOH . G 6 HOH B 111 411 45 HOH HOH . G 6 HOH B 112 412 7 HOH HOH . G 6 HOH B 113 413 44 HOH HOH . G 6 HOH B 114 414 15 HOH HOH . G 6 HOH B 115 415 53 HOH HOH . G 6 HOH B 116 416 41 HOH HOH . G 6 HOH B 117 417 38 HOH HOH . G 6 HOH B 118 418 57 HOH HOH . G 6 HOH B 119 419 257 HOH HOH . G 6 HOH B 120 420 18 HOH HOH . G 6 HOH B 121 421 103 HOH HOH . G 6 HOH B 122 422 54 HOH HOH . G 6 HOH B 123 423 69 HOH HOH . G 6 HOH B 124 424 154 HOH HOH . G 6 HOH B 125 425 22 HOH HOH . G 6 HOH B 126 426 133 HOH HOH . G 6 HOH B 127 427 112 HOH HOH . G 6 HOH B 128 428 30 HOH HOH . G 6 HOH B 129 429 19 HOH HOH . G 6 HOH B 130 430 266 HOH HOH . G 6 HOH B 131 431 114 HOH HOH . G 6 HOH B 132 432 115 HOH HOH . G 6 HOH B 133 433 23 HOH HOH . G 6 HOH B 134 434 21 HOH HOH . G 6 HOH B 135 435 13 HOH HOH . G 6 HOH B 136 436 104 HOH HOH . G 6 HOH B 137 437 166 HOH HOH . G 6 HOH B 138 438 205 HOH HOH . G 6 HOH B 139 439 127 HOH HOH . G 6 HOH B 140 440 259 HOH HOH . G 6 HOH B 141 441 14 HOH HOH . G 6 HOH B 142 442 131 HOH HOH . G 6 HOH B 143 443 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . D 4 -38.964 -15.528 -19.801 1 43.8 ? N1 EPE 203 B 1 HETATM 2 C C2 EPE . . . D 4 -38.555 -14.582 -20.856 1 41.47 ? C2 EPE 203 B 1 HETATM 3 C C3 EPE . . . D 4 -38.695 -13.151 -20.396 1 38.56 ? C3 EPE 203 B 1 HETATM 4 N N4 EPE . . . D 4 -37.878 -12.894 -19.204 1 35.02 ? N4 EPE 203 B 1 HETATM 5 C C5 EPE . . . D 4 -38.255 -13.838 -18.141 1 35.62 ? C5 EPE 203 B 1 HETATM 6 C C6 EPE . . . D 4 -38.152 -15.269 -18.604 1 40.08 ? C6 EPE 203 B 1 HETATM 7 C C7 EPE . . . D 4 -38.043 -11.515 -18.745 1 33.44 ? C7 EPE 203 B 1 HETATM 8 C C8 EPE . . . D 4 -37.963 -10.469 -19.845 1 33.03 ? C8 EPE 203 B 1 HETATM 9 O O8 EPE . . . D 4 -39.131 -10.4 -20.651 1 30.38 ? O8 EPE 203 B 1 HETATM 10 C C9 EPE . . . D 4 -38.759 -16.916 -20.263 1 47.22 ? C9 EPE 203 B 1 HETATM 11 C C10 EPE . . . D 4 -39.924 -17.874 -20.011 1 47.65 ? C10 EPE 203 B 1 HETATM 12 S S EPE . . . D 4 -39.579 -19.478 -20.701 1 48.57 ? S EPE 203 B 1 HETATM 13 O O1S EPE . . . D 4 -38.237 -19.372 -21.22 1 37.32 ? O1S EPE 203 B 1 HETATM 14 O O2S EPE . . . D 4 -40.662 -19.777 -21.598 1 45.43 ? O2S EPE 203 B 1 HETATM 15 O O3S EPE . . . D 4 -39.674 -20.366 -19.432 1 43.73 ? O3S EPE 203 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #