data_7HMJ # _model_server_result.job_id iojQT44z4DmGtQAcu4_7aA _model_server_result.datetime_utc '2024-12-27 13:54:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hmj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7HMJ # _exptl.entry_id 7HMJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 198.289 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(3-methyl-1,2,4-thiadiazol-5-yl)-1,4-diazepane _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HMJ _cell.length_a 95.832 _cell.length_b 95.832 _cell.length_c 45.876 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HMJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H14 N4 S' _chem_comp.formula_weight 198.289 _chem_comp.id K1P _chem_comp.mon_nstd_flag . _chem_comp.name 1-(3-methyl-1,2,4-thiadiazol-5-yl)-1,4-diazepane _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 N3 K1P sing 182 n n C6 C7 K1P sing 183 n n N3 C5 K1P sing 184 n n C5 C4 K1P sing 185 n n C7 N2 K1P sing 186 n n C4 C3 K1P sing 187 n n C3 N2 K1P sing 188 n n N2 C2 K1P sing 189 n n N1 C2 K1P doub 190 n y N1 C1 K1P sing 191 n y C2 S K1P sing 192 n y C1 C K1P sing 193 n n C1 N K1P doub 194 n y S N K1P sing 195 n y N3 H1 K1P sing 196 n n C4 H3 K1P sing 197 n n C4 H4 K1P sing 198 n n C5 H5 K1P sing 199 n n C5 H6 K1P sing 200 n n C6 H7 K1P sing 201 n n C6 H8 K1P sing 202 n n C7 H9 K1P sing 203 n n C7 H10 K1P sing 204 n n C H11 K1P sing 205 n n C H12 K1P sing 206 n n C H13 K1P sing 207 n n C3 H14 K1P sing 208 n n C3 H15 K1P sing 209 n n # _atom_sites.entry_id 7HMJ _atom_sites.fract_transf_matrix[1][1] 0.010435 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010435 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021798 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K1P B 1 201 302 K1P LIG . C 3 EDO B 1 202 303 EDO EDO . D 3 EDO B 1 203 305 EDO EDO . E 4 SO4 B 1 204 1 SO4 SO4 . F 5 HOH B 1 301 85 HOH HOH . F 5 HOH B 2 302 34 HOH HOH . F 5 HOH B 3 303 2 HOH HOH . F 5 HOH B 4 304 29 HOH HOH . F 5 HOH B 5 305 264 HOH HOH . F 5 HOH B 6 306 107 HOH HOH . F 5 HOH B 7 307 11 HOH HOH . F 5 HOH B 8 308 129 HOH HOH . F 5 HOH B 9 309 99 HOH HOH . F 5 HOH B 10 310 112 HOH HOH . F 5 HOH B 11 311 22 HOH HOH . F 5 HOH B 12 312 1 HOH HOH . F 5 HOH B 13 313 26 HOH HOH . F 5 HOH B 14 314 66 HOH HOH . F 5 HOH B 15 315 16 HOH HOH . F 5 HOH B 16 316 32 HOH HOH . F 5 HOH B 17 317 281 HOH HOH . F 5 HOH B 18 318 90 HOH HOH . F 5 HOH B 19 319 214 HOH HOH . F 5 HOH B 20 320 100 HOH HOH . F 5 HOH B 21 321 63 HOH HOH . F 5 HOH B 22 322 40 HOH HOH . F 5 HOH B 23 323 27 HOH HOH . F 5 HOH B 24 324 4 HOH HOH . F 5 HOH B 25 325 34 HOH HOH . F 5 HOH B 26 326 10 HOH HOH . F 5 HOH B 27 327 21 HOH HOH . F 5 HOH B 28 328 19 HOH HOH . F 5 HOH B 29 329 89 HOH HOH . F 5 HOH B 30 330 36 HOH HOH . F 5 HOH B 31 331 76 HOH HOH . F 5 HOH B 32 332 51 HOH HOH . F 5 HOH B 33 333 9 HOH HOH . F 5 HOH B 34 334 27 HOH HOH . F 5 HOH B 35 335 267 HOH HOH . F 5 HOH B 36 336 102 HOH HOH . F 5 HOH B 37 337 70 HOH HOH . F 5 HOH B 38 338 39 HOH HOH . F 5 HOH B 39 339 7 HOH HOH . F 5 HOH B 40 340 18 HOH HOH . F 5 HOH B 41 341 25 HOH HOH . F 5 HOH B 42 342 43 HOH HOH . F 5 HOH B 43 343 11 HOH HOH . F 5 HOH B 44 344 22 HOH HOH . F 5 HOH B 45 345 184 HOH HOH . F 5 HOH B 46 346 58 HOH HOH . F 5 HOH B 47 347 20 HOH HOH . F 5 HOH B 48 348 72 HOH HOH . F 5 HOH B 49 349 2 HOH HOH . F 5 HOH B 50 350 59 HOH HOH . F 5 HOH B 51 351 73 HOH HOH . F 5 HOH B 52 352 29 HOH HOH . F 5 HOH B 53 353 16 HOH HOH . F 5 HOH B 54 354 68 HOH HOH . F 5 HOH B 55 355 81 HOH HOH . F 5 HOH B 56 356 33 HOH HOH . F 5 HOH B 57 357 211 HOH HOH . F 5 HOH B 58 358 26 HOH HOH . F 5 HOH B 59 359 50 HOH HOH . F 5 HOH B 60 360 31 HOH HOH . F 5 HOH B 61 361 15 HOH HOH . F 5 HOH B 62 362 71 HOH HOH . F 5 HOH B 63 363 61 HOH HOH . F 5 HOH B 64 364 62 HOH HOH . F 5 HOH B 65 365 115 HOH HOH . F 5 HOH B 66 366 6 HOH HOH . F 5 HOH B 67 367 60 HOH HOH . F 5 HOH B 68 368 55 HOH HOH . F 5 HOH B 69 369 30 HOH HOH . F 5 HOH B 70 370 126 HOH HOH . F 5 HOH B 71 371 64 HOH HOH . F 5 HOH B 72 372 8 HOH HOH . F 5 HOH B 73 373 28 HOH HOH . F 5 HOH B 74 374 47 HOH HOH . F 5 HOH B 75 375 49 HOH HOH . F 5 HOH B 76 376 304 HOH HOH . F 5 HOH B 77 377 32 HOH HOH . F 5 HOH B 78 378 1 HOH HOH . F 5 HOH B 79 379 10 HOH HOH . F 5 HOH B 80 380 4 HOH HOH . F 5 HOH B 81 381 93 HOH HOH . F 5 HOH B 82 382 42 HOH HOH . F 5 HOH B 83 383 86 HOH HOH . F 5 HOH B 84 384 97 HOH HOH . F 5 HOH B 85 385 172 HOH HOH . F 5 HOH B 86 386 157 HOH HOH . F 5 HOH B 87 387 14 HOH HOH . F 5 HOH B 88 388 303 HOH HOH . F 5 HOH B 89 389 3 HOH HOH . F 5 HOH B 90 390 3 HOH HOH . F 5 HOH B 91 391 12 HOH HOH . F 5 HOH B 92 392 24 HOH HOH . F 5 HOH B 93 393 8 HOH HOH . F 5 HOH B 94 394 48 HOH HOH . F 5 HOH B 95 395 57 HOH HOH . F 5 HOH B 96 396 156 HOH HOH . F 5 HOH B 97 397 137 HOH HOH . F 5 HOH B 98 398 23 HOH HOH . F 5 HOH B 99 399 38 HOH HOH . F 5 HOH B 100 400 45 HOH HOH . F 5 HOH B 101 401 56 HOH HOH . F 5 HOH B 102 402 7 HOH HOH . F 5 HOH B 103 403 114 HOH HOH . F 5 HOH B 104 404 120 HOH HOH . F 5 HOH B 105 405 53 HOH HOH . F 5 HOH B 106 406 140 HOH HOH . F 5 HOH B 107 407 41 HOH HOH . F 5 HOH B 108 408 257 HOH HOH . F 5 HOH B 109 409 69 HOH HOH . F 5 HOH B 110 410 197 HOH HOH . F 5 HOH B 111 411 15 HOH HOH . F 5 HOH B 112 412 25 HOH HOH . F 5 HOH B 113 413 54 HOH HOH . F 5 HOH B 114 414 133 HOH HOH . F 5 HOH B 115 415 125 HOH HOH . F 5 HOH B 116 416 263 HOH HOH . F 5 HOH B 117 417 154 HOH HOH . F 5 HOH B 118 418 44 HOH HOH . F 5 HOH B 119 419 103 HOH HOH . F 5 HOH B 120 420 5 HOH HOH . F 5 HOH B 121 421 19 HOH HOH . F 5 HOH B 122 422 20 HOH HOH . F 5 HOH B 123 423 266 HOH HOH . F 5 HOH B 124 424 13 HOH HOH . F 5 HOH B 125 425 18 HOH HOH . F 5 HOH B 126 426 31 HOH HOH . F 5 HOH B 127 427 30 HOH HOH . F 5 HOH B 128 428 21 HOH HOH . F 5 HOH B 129 429 13 HOH HOH . F 5 HOH B 130 430 104 HOH HOH . F 5 HOH B 131 431 23 HOH HOH . F 5 HOH B 132 432 82 HOH HOH . F 5 HOH B 133 433 205 HOH HOH . F 5 HOH B 134 434 98 HOH HOH . F 5 HOH B 135 435 127 HOH HOH . F 5 HOH B 136 436 131 HOH HOH . F 5 HOH B 137 437 14 HOH HOH . F 5 HOH B 138 438 270 HOH HOH . F 5 HOH B 139 439 259 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 K1P . . . B 2 -45.62 -6.907 -28.713 0.74 34.05 ? N1 K1P 201 B 1 HETATM 2 N N3 K1P . . . B 2 -46.32 -3.903 -24.536 0.74 34.86 ? N3 K1P 201 B 1 HETATM 3 C C4 K1P . . . B 2 -47.667 -5.361 -26.051 0.74 32.24 ? C4 K1P 201 B 1 HETATM 4 C C5 K1P . . . B 2 -47.645 -4.297 -24.957 0.74 31.85 ? C5 K1P 201 B 1 HETATM 5 C C6 K1P . . . B 2 -45.604 -3.157 -25.561 0.74 35.29 ? C6 K1P 201 B 1 HETATM 6 C C7 K1P . . . B 2 -44.854 -4.046 -26.542 0.74 35.02 ? C7 K1P 201 B 1 HETATM 7 N N K1P . . . B 2 -43.375 -7.19 -29.372 0.74 36.34 ? N K1P 201 B 1 HETATM 8 C C K1P . . . B 2 -45.057 -9.006 -30.161 0.74 34.75 ? C K1P 201 B 1 HETATM 9 C C1 K1P . . . B 2 -44.65 -7.737 -29.448 0.74 36.52 ? C1 K1P 201 B 1 HETATM 10 C C2 K1P . . . B 2 -45.005 -5.837 -28.183 0.74 33.47 ? C2 K1P 201 B 1 HETATM 11 C C3 K1P . . . B 2 -47.151 -4.86 -27.401 0.74 33.27 ? C3 K1P 201 B 1 HETATM 12 N N2 K1P . . . B 2 -45.702 -4.863 -27.377 0.74 33.17 ? N2 K1P 201 B 1 HETATM 13 S S K1P . . . B 2 -43.418 -5.87 -28.509 0.74 35.36 ? S K1P 201 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #