data_7HO5 # _model_server_result.job_id AugWBr2XWDeW00GN3Wfa8Q _model_server_result.datetime_utc '2024-12-01 05:46:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ho5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7HO5 # _exptl.entry_id 7HO5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HO5 _cell.length_a 95.394 _cell.length_b 95.394 _cell.length_c 45.715 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7HO5 _atom_sites.fract_transf_matrix[1][1] 0.010483 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021875 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 201 202 EDO EDO . C 3 UXD B 1 202 302 UXD LIG . D 2 EDO B 1 203 305 EDO EDO . E 4 SO4 B 1 204 1 SO4 SO4 . F 5 HOH B 1 301 11 HOH HOH . F 5 HOH B 2 302 4 HOH HOH . F 5 HOH B 3 303 2 HOH HOH . F 5 HOH B 4 304 29 HOH HOH . F 5 HOH B 5 305 12 HOH HOH . F 5 HOH B 6 306 21 HOH HOH . F 5 HOH B 7 307 26 HOH HOH . F 5 HOH B 8 308 27 HOH HOH . F 5 HOH B 9 309 1 HOH HOH . F 5 HOH B 10 310 33 HOH HOH . F 5 HOH B 11 311 99 HOH HOH . F 5 HOH B 12 312 40 HOH HOH . F 5 HOH B 13 313 63 HOH HOH . F 5 HOH B 14 314 34 HOH HOH . F 5 HOH B 15 315 5 HOH HOH . F 5 HOH B 16 316 95 HOH HOH . F 5 HOH B 17 317 16 HOH HOH . F 5 HOH B 18 318 25 HOH HOH . F 5 HOH B 19 319 90 HOH HOH . F 5 HOH B 20 320 129 HOH HOH . F 5 HOH B 21 321 51 HOH HOH . F 5 HOH B 22 322 102 HOH HOH . F 5 HOH B 23 323 100 HOH HOH . F 5 HOH B 24 324 86 HOH HOH . F 5 HOH B 25 325 11 HOH HOH . F 5 HOH B 26 326 31 HOH HOH . F 5 HOH B 27 327 9 HOH HOH . F 5 HOH B 28 328 70 HOH HOH . F 5 HOH B 29 329 157 HOH HOH . F 5 HOH B 30 330 10 HOH HOH . F 5 HOH B 31 331 16 HOH HOH . F 5 HOH B 32 332 39 HOH HOH . F 5 HOH B 33 333 72 HOH HOH . F 5 HOH B 34 334 80 HOH HOH . F 5 HOH B 35 335 58 HOH HOH . F 5 HOH B 36 336 68 HOH HOH . F 5 HOH B 37 337 89 HOH HOH . F 5 HOH B 38 338 18 HOH HOH . F 5 HOH B 39 339 81 HOH HOH . F 5 HOH B 40 340 62 HOH HOH . F 5 HOH B 41 341 36 HOH HOH . F 5 HOH B 42 342 2 HOH HOH . F 5 HOH B 43 343 20 HOH HOH . F 5 HOH B 44 344 26 HOH HOH . F 5 HOH B 45 345 22 HOH HOH . F 5 HOH B 46 346 7 HOH HOH . F 5 HOH B 47 347 85 HOH HOH . F 5 HOH B 48 348 126 HOH HOH . F 5 HOH B 49 349 267 HOH HOH . F 5 HOH B 50 350 55 HOH HOH . F 5 HOH B 51 351 29 HOH HOH . F 5 HOH B 52 352 27 HOH HOH . F 5 HOH B 53 353 28 HOH HOH . F 5 HOH B 54 354 50 HOH HOH . F 5 HOH B 55 355 19 HOH HOH . F 5 HOH B 56 356 10 HOH HOH . F 5 HOH B 57 357 66 HOH HOH . F 5 HOH B 58 358 15 HOH HOH . F 5 HOH B 59 359 211 HOH HOH . F 5 HOH B 60 360 4 HOH HOH . F 5 HOH B 61 361 1 HOH HOH . F 5 HOH B 62 362 47 HOH HOH . F 5 HOH B 63 363 93 HOH HOH . F 5 HOH B 64 364 6 HOH HOH . F 5 HOH B 65 365 61 HOH HOH . F 5 HOH B 66 366 184 HOH HOH . F 5 HOH B 67 367 25 HOH HOH . F 5 HOH B 68 368 8 HOH HOH . F 5 HOH B 69 369 17 HOH HOH . F 5 HOH B 70 370 43 HOH HOH . F 5 HOH B 71 371 304 HOH HOH . F 5 HOH B 72 372 13 HOH HOH . F 5 HOH B 73 373 59 HOH HOH . F 5 HOH B 74 374 3 HOH HOH . F 5 HOH B 75 375 3 HOH HOH . F 5 HOH B 76 376 116 HOH HOH . F 5 HOH B 77 377 71 HOH HOH . F 5 HOH B 78 378 214 HOH HOH . F 5 HOH B 79 379 14 HOH HOH . F 5 HOH B 80 380 264 HOH HOH . F 5 HOH B 81 381 76 HOH HOH . F 5 HOH B 82 382 82 HOH HOH . F 5 HOH B 83 383 24 HOH HOH . F 5 HOH B 84 384 32 HOH HOH . F 5 HOH B 85 385 45 HOH HOH . F 5 HOH B 86 386 172 HOH HOH . F 5 HOH B 87 387 32 HOH HOH . F 5 HOH B 88 388 281 HOH HOH . F 5 HOH B 89 389 46 HOH HOH . F 5 HOH B 90 390 137 HOH HOH . F 5 HOH B 91 391 64 HOH HOH . F 5 HOH B 92 392 303 HOH HOH . F 5 HOH B 93 393 48 HOH HOH . F 5 HOH B 94 394 156 HOH HOH . F 5 HOH B 95 395 56 HOH HOH . F 5 HOH B 96 396 125 HOH HOH . F 5 HOH B 97 397 60 HOH HOH . F 5 HOH B 98 398 97 HOH HOH . F 5 HOH B 99 399 23 HOH HOH . F 5 HOH B 100 400 18 HOH HOH . F 5 HOH B 101 401 33 HOH HOH . F 5 HOH B 102 402 8 HOH HOH . F 5 HOH B 103 403 49 HOH HOH . F 5 HOH B 104 404 20 HOH HOH . F 5 HOH B 105 405 54 HOH HOH . F 5 HOH B 106 406 112 HOH HOH . F 5 HOH B 107 407 30 HOH HOH . F 5 HOH B 108 408 42 HOH HOH . F 5 HOH B 109 409 7 HOH HOH . F 5 HOH B 110 410 57 HOH HOH . F 5 HOH B 111 411 120 HOH HOH . F 5 HOH B 112 412 257 HOH HOH . F 5 HOH B 113 413 154 HOH HOH . F 5 HOH B 114 414 38 HOH HOH . F 5 HOH B 115 415 22 HOH HOH . F 5 HOH B 116 416 15 HOH HOH . F 5 HOH B 117 417 103 HOH HOH . F 5 HOH B 118 418 140 HOH HOH . F 5 HOH B 119 419 263 HOH HOH . F 5 HOH B 120 420 41 HOH HOH . F 5 HOH B 121 421 69 HOH HOH . F 5 HOH B 122 422 5 HOH HOH . F 5 HOH B 123 423 44 HOH HOH . F 5 HOH B 124 424 53 HOH HOH . F 5 HOH B 125 425 19 HOH HOH . F 5 HOH B 126 426 197 HOH HOH . F 5 HOH B 127 427 30 HOH HOH . F 5 HOH B 128 428 133 HOH HOH . F 5 HOH B 129 429 114 HOH HOH . F 5 HOH B 130 430 266 HOH HOH . F 5 HOH B 131 431 107 HOH HOH . F 5 HOH B 132 432 23 HOH HOH . F 5 HOH B 133 433 115 HOH HOH . F 5 HOH B 134 434 21 HOH HOH . F 5 HOH B 135 435 98 HOH HOH . F 5 HOH B 136 436 104 HOH HOH . F 5 HOH B 137 437 166 HOH HOH . F 5 HOH B 138 438 205 HOH HOH . F 5 HOH B 139 439 127 HOH HOH . F 5 HOH B 140 440 14 HOH HOH . F 5 HOH B 141 441 131 HOH HOH . F 5 HOH B 142 442 259 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 -50.401 -17.112 -33.061 1 40.76 ? C1 EDO 203 B 1 HETATM 2 O O1 EDO . . . D 2 -49.165 -16.424 -33.043 1 34.39 ? O1 EDO 203 B 1 HETATM 3 C C2 EDO . . . D 2 -51.047 -17.156 -31.734 1 39.73 ? C2 EDO 203 B 1 HETATM 4 O O2 EDO . . . D 2 -51.2 -15.868 -31.211 1 45.47 ? O2 EDO 203 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #