data_7HP7 # _model_server_result.job_id xIjLjGjHw-TOk6M9s5UJsw _model_server_result.datetime_utc '2025-02-27 10:18:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hp7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 7HP7 # _exptl.entry_id 7HP7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.382 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8S)-7-{[6-methoxy-2-(piperazin-1-yl)pyrimidin-4-yl]methoxy}-5-methyl[1,2,4]triazolo[1,5-a]pyrimidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HP7 _cell.length_a 42.3 _cell.length_b 42.3 _cell.length_c 216.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HP7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 134 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 143 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 134 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 143 _struct_conn.ptnr2_symmetry 8_444 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.326 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H20 N8 O2' _chem_comp.formula_weight 356.382 _chem_comp.id A1BGN _chem_comp.mon_nstd_flag . _chem_comp.name (8S)-7-{[6-methoxy-2-(piperazin-1-yl)pyrimidin-4-yl]methoxy}-5-methyl[1,2,4]triazolo[1,5-a]pyrimidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 A1BGN sing 1 n n O1 C2 A1BGN sing 2 n n C2 C3 A1BGN doub 3 n y C3 C4 A1BGN sing 4 n y C4 C5 A1BGN sing 5 n n C5 O2 A1BGN sing 6 n n O2 C6 A1BGN sing 7 n n C6 C7 A1BGN doub 8 n y C7 C8 A1BGN sing 9 n y C8 C9 A1BGN sing 10 n n C8 N1 A1BGN doub 11 n y N1 C10 A1BGN sing 12 n y C10 N2 A1BGN doub 13 n y N2 C11 A1BGN sing 14 n y C11 N3 A1BGN doub 15 n y N3 N4 A1BGN sing 16 n y C4 N5 A1BGN doub 17 n y N5 C12 A1BGN sing 18 n y C12 N6 A1BGN sing 19 n n N6 C13 A1BGN sing 20 n n C13 C14 A1BGN sing 21 n n C14 N7 A1BGN sing 22 n n N7 C15 A1BGN sing 23 n n C15 C16 A1BGN sing 24 n n C12 N8 A1BGN doub 25 n y C2 N8 A1BGN sing 26 n y C6 N4 A1BGN sing 27 n y N6 C16 A1BGN sing 28 n n C10 N4 A1BGN sing 29 n y C5 H5 A1BGN sing 30 n n C5 H6 A1BGN sing 31 n n C7 H7 A1BGN sing 32 n n C13 H13 A1BGN sing 33 n n C13 H12 A1BGN sing 34 n n C15 H18 A1BGN sing 35 n n C15 H17 A1BGN sing 36 n n C1 H3 A1BGN sing 37 n n C1 H1 A1BGN sing 38 n n C1 H2 A1BGN sing 39 n n C3 H4 A1BGN sing 40 n n C9 H9 A1BGN sing 41 n n C9 H10 A1BGN sing 42 n n C9 H8 A1BGN sing 43 n n C11 H11 A1BGN sing 44 n n C14 H15 A1BGN sing 45 n n C14 H14 A1BGN sing 46 n n N7 H21 A1BGN sing 47 n n C16 H19 A1BGN sing 48 n n C16 H20 A1BGN sing 49 n n # _atom_sites.entry_id 7HP7 _atom_sites.fract_transf_matrix[1][1] 0.023641 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMS B 1 201 201 DMS DMS . D 3 DMS B 1 202 202 DMS DMS . E 3 DMS B 1 203 203 DMS DMS . F 4 A1BGN B 1 204 301 A1BGN LIG . G 5 SO4 B 1 205 302 SO4 SO4 . H 3 DMS B 1 206 303 DMS DMS . I 5 SO4 B 1 207 304 SO4 SO4 . J 3 DMS B 1 208 305 DMS DMS . K 6 HOH A 1 101 105 HOH HOH . K 6 HOH A 2 102 48 HOH HOH . K 6 HOH A 3 103 12 HOH HOH . K 6 HOH A 4 104 65 HOH HOH . K 6 HOH A 5 105 34 HOH HOH . K 6 HOH A 6 106 121 HOH HOH . K 6 HOH A 7 107 98 HOH HOH . K 6 HOH A 8 108 16 HOH HOH . K 6 HOH A 9 109 70 HOH HOH . K 6 HOH A 10 110 110 HOH HOH . K 6 HOH A 11 111 118 HOH HOH . K 6 HOH A 12 112 49 HOH HOH . K 6 HOH A 13 113 50 HOH HOH . K 6 HOH A 14 114 36 HOH HOH . K 6 HOH A 15 115 28 HOH HOH . K 6 HOH A 16 116 20 HOH HOH . K 6 HOH A 17 117 40 HOH HOH . K 6 HOH A 18 118 29 HOH HOH . K 6 HOH A 19 119 27 HOH HOH . K 6 HOH A 20 120 120 HOH HOH . K 6 HOH A 21 121 77 HOH HOH . K 6 HOH A 22 122 119 HOH HOH . K 6 HOH A 23 123 85 HOH HOH . L 6 HOH B 1 301 57 HOH HOH . L 6 HOH B 2 302 69 HOH HOH . L 6 HOH B 3 303 102 HOH HOH . L 6 HOH B 4 304 5 HOH HOH . L 6 HOH B 5 305 90 HOH HOH . L 6 HOH B 6 306 14 HOH HOH . L 6 HOH B 7 307 9 HOH HOH . L 6 HOH B 8 308 79 HOH HOH . L 6 HOH B 9 309 31 HOH HOH . L 6 HOH B 10 310 23 HOH HOH . L 6 HOH B 11 311 4 HOH HOH . L 6 HOH B 12 312 51 HOH HOH . L 6 HOH B 13 313 81 HOH HOH . L 6 HOH B 14 314 123 HOH HOH . L 6 HOH B 15 315 11 HOH HOH . L 6 HOH B 16 316 58 HOH HOH . L 6 HOH B 17 317 127 HOH HOH . L 6 HOH B 18 318 89 HOH HOH . L 6 HOH B 19 319 68 HOH HOH . L 6 HOH B 20 320 56 HOH HOH . L 6 HOH B 21 321 62 HOH HOH . L 6 HOH B 22 322 108 HOH HOH . L 6 HOH B 23 323 73 HOH HOH . L 6 HOH B 24 324 126 HOH HOH . L 6 HOH B 25 325 117 HOH HOH . L 6 HOH B 26 326 63 HOH HOH . L 6 HOH B 27 327 66 HOH HOH . L 6 HOH B 28 328 35 HOH HOH . L 6 HOH B 29 329 24 HOH HOH . L 6 HOH B 30 330 13 HOH HOH . L 6 HOH B 31 331 100 HOH HOH . L 6 HOH B 32 332 61 HOH HOH . L 6 HOH B 33 333 1 HOH HOH . L 6 HOH B 34 334 106 HOH HOH . L 6 HOH B 35 335 30 HOH HOH . L 6 HOH B 36 336 72 HOH HOH . L 6 HOH B 37 337 10 HOH HOH . L 6 HOH B 38 338 2 HOH HOH . L 6 HOH B 39 339 46 HOH HOH . L 6 HOH B 40 340 32 HOH HOH . L 6 HOH B 41 341 54 HOH HOH . L 6 HOH B 42 342 67 HOH HOH . L 6 HOH B 43 343 45 HOH HOH . L 6 HOH B 44 344 39 HOH HOH . L 6 HOH B 45 345 21 HOH HOH . L 6 HOH B 46 346 82 HOH HOH . L 6 HOH B 47 347 92 HOH HOH . L 6 HOH B 48 348 60 HOH HOH . L 6 HOH B 49 349 43 HOH HOH . L 6 HOH B 50 350 124 HOH HOH . L 6 HOH B 51 351 94 HOH HOH . L 6 HOH B 52 352 42 HOH HOH . L 6 HOH B 53 353 3 HOH HOH . L 6 HOH B 54 354 122 HOH HOH . L 6 HOH B 55 355 129 HOH HOH . L 6 HOH B 56 356 64 HOH HOH . L 6 HOH B 57 357 115 HOH HOH . L 6 HOH B 58 358 103 HOH HOH . L 6 HOH B 59 359 18 HOH HOH . L 6 HOH B 60 360 112 HOH HOH . L 6 HOH B 61 361 107 HOH HOH . L 6 HOH B 62 362 17 HOH HOH . L 6 HOH B 63 363 116 HOH HOH . L 6 HOH B 64 364 87 HOH HOH . L 6 HOH B 65 365 80 HOH HOH . L 6 HOH B 66 366 26 HOH HOH . L 6 HOH B 67 367 128 HOH HOH . L 6 HOH B 68 368 125 HOH HOH . L 6 HOH B 69 369 59 HOH HOH . L 6 HOH B 70 370 75 HOH HOH . L 6 HOH B 71 371 130 HOH HOH . L 6 HOH B 72 372 109 HOH HOH . L 6 HOH B 73 373 44 HOH HOH . L 6 HOH B 74 374 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1BGN . C . F 4 -1.437 3.815 -13.23 0.28 68.57 ? N1 A1BGN 204 B 1 HETATM 2 N N1 A1BGN . D . F 4 -1.438 3.816 -13.231 0.32 68.61 ? N1 A1BGN 204 B 1 HETATM 3 N N3 A1BGN . C . F 4 -4.706 2.525 -13.326 0.28 65.18 ? N3 A1BGN 204 B 1 HETATM 4 N N3 A1BGN . D . F 4 -4.706 2.525 -13.327 0.32 65.09 ? N3 A1BGN 204 B 1 HETATM 5 C C4 A1BGN . C . F 4 -6.912 4.547 -15.117 0.28 69.42 ? C4 A1BGN 204 B 1 HETATM 6 C C4 A1BGN . D . F 4 -6.912 4.546 -15.117 0.32 69.46 ? C4 A1BGN 204 B 1 HETATM 7 C C5 A1BGN . C . F 4 -6.491 4.688 -13.681 0.28 67.84 ? C5 A1BGN 204 B 1 HETATM 8 C C5 A1BGN . D . F 4 -6.49 4.687 -13.681 0.32 67.8 ? C5 A1BGN 204 B 1 HETATM 9 C C6 A1BGN . C . F 4 -4.077 4.886 -13.492 0.28 67.4 ? C6 A1BGN 204 B 1 HETATM 10 C C6 A1BGN . D . F 4 -4.077 4.886 -13.493 0.32 67.39 ? C6 A1BGN 204 B 1 HETATM 11 C C7 A1BGN . C . F 4 -2.986 5.711 -13.492 0.28 67.94 ? C7 A1BGN 204 B 1 HETATM 12 C C7 A1BGN . D . F 4 -2.987 5.712 -13.493 0.32 67.92 ? C7 A1BGN 204 B 1 HETATM 13 C C8 A1BGN . C . F 4 -1.696 5.158 -13.356 0.28 69.01 ? C8 A1BGN 204 B 1 HETATM 14 C C8 A1BGN . D . F 4 -1.697 5.158 -13.357 0.32 69.05 ? C8 A1BGN 204 B 1 HETATM 15 C C10 A1BGN . C . F 4 -2.552 3.049 -13.23 0.28 67.04 ? C10 A1BGN 204 B 1 HETATM 16 C C10 A1BGN . D . F 4 -2.553 3.05 -13.231 0.32 67.02 ? C10 A1BGN 204 B 1 HETATM 17 C C13 A1BGN . C . F 4 -5.667 4.848 -19.719 0.28 72.78 ? C13 A1BGN 204 B 1 HETATM 18 C C13 A1BGN . D . F 4 -5.668 4.848 -19.719 0.32 72.79 ? C13 A1BGN 204 B 1 HETATM 19 C C15 A1BGN . C . F 4 -4.011 6.896 -19.062 0.28 73.41 ? C15 A1BGN 204 B 1 HETATM 20 C C15 A1BGN . D . F 4 -4.01 6.895 -19.061 0.32 73.41 ? C15 A1BGN 204 B 1 HETATM 21 C C1 A1BGN . C . F 4 -10.134 3.967 -18.542 0.28 70.36 ? C1 A1BGN 204 B 1 HETATM 22 C C1 A1BGN . D . F 4 -10.132 3.966 -18.543 0.32 70.38 ? C1 A1BGN 204 B 1 HETATM 23 O O1 A1BGN . C . F 4 -9.694 3.659 -17.211 0.28 69.45 ? O1 A1BGN 204 B 1 HETATM 24 O O1 A1BGN . D . F 4 -9.695 3.661 -17.211 0.32 69.43 ? O1 A1BGN 204 B 1 HETATM 25 C C2 A1BGN . C . F 4 -8.464 4.059 -16.839 0.28 70.39 ? C2 A1BGN 204 B 1 HETATM 26 C C2 A1BGN . D . F 4 -8.464 4.061 -16.839 0.32 70.45 ? C2 A1BGN 204 B 1 HETATM 27 C C3 A1BGN . C . F 4 -8.177 4.155 -15.492 0.28 69.6 ? C3 A1BGN 204 B 1 HETATM 28 C C3 A1BGN . D . F 4 -8.178 4.156 -15.491 0.32 69.64 ? C3 A1BGN 204 B 1 HETATM 29 O O2 A1BGN . C . F 4 -5.294 5.483 -13.616 0.28 67.98 ? O2 A1BGN 204 B 1 HETATM 30 O O2 A1BGN . D . F 4 -5.293 5.482 -13.616 0.32 67.98 ? O2 A1BGN 204 B 1 HETATM 31 C C9 A1BGN . C . F 4 -0.477 6.025 -13.35 0.28 70.56 ? C9 A1BGN 204 B 1 HETATM 32 C C9 A1BGN . D . F 4 -0.478 6.025 -13.35 0.32 70.66 ? C9 A1BGN 204 B 1 HETATM 33 N N2 A1BGN . C . F 4 -2.595 1.725 -13.12 0.28 65.89 ? N2 A1BGN 204 B 1 HETATM 34 N N2 A1BGN . D . F 4 -2.594 1.726 -13.122 0.32 65.8 ? N2 A1BGN 204 B 1 HETATM 35 C C11 A1BGN . C . F 4 -3.906 1.46 -13.183 0.28 65.47 ? C11 A1BGN 204 B 1 HETATM 36 C C11 A1BGN . D . F 4 -3.905 1.46 -13.185 0.32 65.4 ? C11 A1BGN 204 B 1 HETATM 37 N N4 A1BGN . C . F 4 -3.816 3.536 -13.352 0.28 66.51 ? N4 A1BGN 204 B 1 HETATM 38 N N4 A1BGN . D . F 4 -3.817 3.536 -13.353 0.32 66.47 ? N4 A1BGN 204 B 1 HETATM 39 N N5 A1BGN . C . F 4 -5.99 4.852 -16.045 0.28 69.47 ? N5 A1BGN 204 B 1 HETATM 40 N N5 A1BGN . D . F 4 -5.99 4.852 -16.044 0.32 69.42 ? N5 A1BGN 204 B 1 HETATM 41 C C12 A1BGN . C . F 4 -6.339 4.756 -17.349 0.28 70.68 ? C12 A1BGN 204 B 1 HETATM 42 C C12 A1BGN . D . F 4 -6.339 4.757 -17.349 0.32 70.67 ? C12 A1BGN 204 B 1 HETATM 43 N N6 A1BGN . C . F 4 -5.404 5.038 -18.296 0.28 72.44 ? N6 A1BGN 204 B 1 HETATM 44 N N6 A1BGN . D . F 4 -5.405 5.038 -18.296 0.32 72.49 ? N6 A1BGN 204 B 1 HETATM 45 C C14 A1BGN . C . F 4 -4.38 4.988 -20.503 0.28 73.84 ? C14 A1BGN 204 B 1 HETATM 46 C C14 A1BGN . D . F 4 -4.382 4.988 -20.503 0.32 73.86 ? C14 A1BGN 204 B 1 HETATM 47 N N7 A1BGN . C . F 4 -3.859 6.349 -20.409 0.28 74.14 ? N7 A1BGN 204 B 1 HETATM 48 N N7 A1BGN . D . F 4 -3.862 6.35 -20.409 0.32 74.15 ? N7 A1BGN 204 B 1 HETATM 49 C C16 A1BGN . C . F 4 -4.189 5.806 -18.022 0.28 73.08 ? C16 A1BGN 204 B 1 HETATM 50 C C16 A1BGN . D . F 4 -4.188 5.804 -18.023 0.32 73.12 ? C16 A1BGN 204 B 1 HETATM 51 N N8 A1BGN . C . F 4 -7.555 4.348 -17.77 0.28 69.58 ? N8 A1BGN 204 B 1 HETATM 52 N N8 A1BGN . D . F 4 -7.555 4.349 -17.769 0.32 69.51 ? N8 A1BGN 204 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 52 #