data_7HP8 # _model_server_result.job_id Bs2l4MAvA-oVQ2QsbEzjVQ _model_server_result.datetime_utc '2025-06-19 03:02:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hp8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 7HP8 # _exptl.entry_id 7HP8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 284.313 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-methylpyridin-4-yl)-5-propanamidopyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7HP8 _cell.length_a 42.254 _cell.length_b 42.254 _cell.length_c 216.509 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 134 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 143 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 134 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 143 _struct_conn.ptnr2_symmetry 8_444 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.384 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H16 N4 O2' _chem_comp.formula_weight 284.313 _chem_comp.id A1BGO _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-methylpyridin-4-yl)-5-propanamidopyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 A1BGO sing 1 n n C2 C3 A1BGO sing 2 n n C3 O1 A1BGO doub 3 n n C3 N1 A1BGO sing 4 n n N1 C4 A1BGO sing 5 n n C4 C5 A1BGO doub 6 n y C5 N2 A1BGO sing 7 n y N2 C6 A1BGO doub 8 n y C6 C7 A1BGO sing 9 n y C7 C8 A1BGO sing 10 n n C8 O2 A1BGO doub 11 n n C8 N3 A1BGO sing 12 n n N3 C9 A1BGO sing 13 n n C9 C10 A1BGO doub 14 n y C10 C11 A1BGO sing 15 n y C11 N4 A1BGO doub 16 n y N4 C12 A1BGO sing 17 n y C12 C13 A1BGO doub 18 n y C13 C14 A1BGO sing 19 n n C7 C15 A1BGO doub 20 n y C4 C15 A1BGO sing 21 n y C9 C13 A1BGO sing 22 n y N1 H6 A1BGO sing 23 n n N3 H9 A1BGO sing 24 n n C5 H7 A1BGO sing 25 n n C6 H8 A1BGO sing 26 n n C10 H10 A1BGO sing 27 n n C15 H16 A1BGO sing 28 n n C1 H3 A1BGO sing 29 n n C1 H1 A1BGO sing 30 n n C1 H2 A1BGO sing 31 n n C2 H4 A1BGO sing 32 n n C2 H5 A1BGO sing 33 n n C11 H11 A1BGO sing 34 n n C12 H12 A1BGO sing 35 n n C14 H13 A1BGO sing 36 n n C14 H15 A1BGO sing 37 n n C14 H14 A1BGO sing 38 n n # _atom_sites.entry_id 7HP8 _atom_sites.fract_transf_matrix[1][1] 0.023666 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMS B 1 201 201 DMS DMS . D 3 DMS B 1 202 202 DMS DMS . E 3 DMS B 1 203 203 DMS DMS . F 4 A1BGO B 1 204 201 A1BGO LIG . G 5 SO4 B 1 205 202 SO4 SO4 . H 6 HOH A 1 101 103 HOH HOH . H 6 HOH A 2 102 105 HOH HOH . H 6 HOH A 3 103 34 HOH HOH . H 6 HOH A 4 104 65 HOH HOH . H 6 HOH A 5 105 54 HOH HOH . H 6 HOH A 6 106 77 HOH HOH . H 6 HOH A 7 107 98 HOH HOH . H 6 HOH A 8 108 131 HOH HOH . H 6 HOH A 9 109 16 HOH HOH . H 6 HOH A 10 110 132 HOH HOH . H 6 HOH A 11 111 50 HOH HOH . H 6 HOH A 12 112 70 HOH HOH . H 6 HOH A 13 113 118 HOH HOH . H 6 HOH A 14 114 121 HOH HOH . H 6 HOH A 15 115 110 HOH HOH . H 6 HOH A 16 116 29 HOH HOH . H 6 HOH A 17 117 36 HOH HOH . H 6 HOH A 18 118 120 HOH HOH . H 6 HOH A 19 119 134 HOH HOH . H 6 HOH A 20 120 27 HOH HOH . H 6 HOH A 21 121 85 HOH HOH . H 6 HOH A 22 122 119 HOH HOH . H 6 HOH A 23 123 135 HOH HOH . H 6 HOH A 24 124 81 HOH HOH . I 6 HOH B 1 301 11 HOH HOH . I 6 HOH B 2 302 66 HOH HOH . I 6 HOH B 3 303 51 HOH HOH . I 6 HOH B 4 304 58 HOH HOH . I 6 HOH B 5 305 92 HOH HOH . I 6 HOH B 6 306 48 HOH HOH . I 6 HOH B 7 307 5 HOH HOH . I 6 HOH B 8 308 136 HOH HOH . I 6 HOH B 9 309 57 HOH HOH . I 6 HOH B 10 310 40 HOH HOH . I 6 HOH B 11 311 14 HOH HOH . I 6 HOH B 12 312 46 HOH HOH . I 6 HOH B 13 313 62 HOH HOH . I 6 HOH B 14 314 115 HOH HOH . I 6 HOH B 15 315 4 HOH HOH . I 6 HOH B 16 316 63 HOH HOH . I 6 HOH B 17 317 24 HOH HOH . I 6 HOH B 18 318 79 HOH HOH . I 6 HOH B 19 319 30 HOH HOH . I 6 HOH B 20 320 106 HOH HOH . I 6 HOH B 21 321 1 HOH HOH . I 6 HOH B 22 322 125 HOH HOH . I 6 HOH B 23 323 117 HOH HOH . I 6 HOH B 24 324 20 HOH HOH . I 6 HOH B 25 325 32 HOH HOH . I 6 HOH B 26 326 23 HOH HOH . I 6 HOH B 27 327 89 HOH HOH . I 6 HOH B 28 328 42 HOH HOH . I 6 HOH B 29 329 102 HOH HOH . I 6 HOH B 30 330 68 HOH HOH . I 6 HOH B 31 331 107 HOH HOH . I 6 HOH B 32 332 31 HOH HOH . I 6 HOH B 33 333 90 HOH HOH . I 6 HOH B 34 334 116 HOH HOH . I 6 HOH B 35 335 17 HOH HOH . I 6 HOH B 36 336 100 HOH HOH . I 6 HOH B 37 337 73 HOH HOH . I 6 HOH B 38 338 108 HOH HOH . I 6 HOH B 39 339 39 HOH HOH . I 6 HOH B 40 340 49 HOH HOH . I 6 HOH B 41 341 35 HOH HOH . I 6 HOH B 42 342 13 HOH HOH . I 6 HOH B 43 343 126 HOH HOH . I 6 HOH B 44 344 2 HOH HOH . I 6 HOH B 45 345 28 HOH HOH . I 6 HOH B 46 346 60 HOH HOH . I 6 HOH B 47 347 21 HOH HOH . I 6 HOH B 48 348 43 HOH HOH . I 6 HOH B 49 349 127 HOH HOH . I 6 HOH B 50 350 10 HOH HOH . I 6 HOH B 51 351 12 HOH HOH . I 6 HOH B 52 352 64 HOH HOH . I 6 HOH B 53 353 83 HOH HOH . I 6 HOH B 54 354 56 HOH HOH . I 6 HOH B 55 355 9 HOH HOH . I 6 HOH B 56 356 122 HOH HOH . I 6 HOH B 57 357 123 HOH HOH . I 6 HOH B 58 358 133 HOH HOH . I 6 HOH B 59 359 72 HOH HOH . I 6 HOH B 60 360 3 HOH HOH . I 6 HOH B 61 361 18 HOH HOH . I 6 HOH B 62 362 82 HOH HOH . I 6 HOH B 63 363 129 HOH HOH . I 6 HOH B 64 364 26 HOH HOH . I 6 HOH B 65 365 130 HOH HOH . I 6 HOH B 66 366 112 HOH HOH . I 6 HOH B 67 367 69 HOH HOH . I 6 HOH B 68 368 124 HOH HOH . I 6 HOH B 69 369 67 HOH HOH . I 6 HOH B 70 370 87 HOH HOH . I 6 HOH B 71 371 45 HOH HOH . I 6 HOH B 72 372 94 HOH HOH . I 6 HOH B 73 373 80 HOH HOH . I 6 HOH B 74 374 75 HOH HOH . I 6 HOH B 75 375 61 HOH HOH . I 6 HOH B 76 376 109 HOH HOH . I 6 HOH B 77 377 59 HOH HOH . I 6 HOH B 78 378 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1BGO . C . F 4 -6.659 5.509 -19.371 0.43 66.64 ? N1 A1BGO 204 B 1 HETATM 2 N N1 A1BGO . D . F 4 -6.659 5.509 -19.371 0.43 66.64 ? N1 A1BGO 204 B 1 HETATM 3 N N3 A1BGO . C . F 4 -8.909 4.683 -13.755 0.43 69.11 ? N3 A1BGO 204 B 1 HETATM 4 N N3 A1BGO . D . F 4 -8.909 4.683 -13.755 0.43 69.11 ? N3 A1BGO 204 B 1 HETATM 5 C C4 A1BGO . C . F 4 -7.58 5.059 -18.4 0.43 63.93 ? C4 A1BGO 204 B 1 HETATM 6 C C4 A1BGO . D . F 4 -7.58 5.059 -18.4 0.43 63.93 ? C4 A1BGO 204 B 1 HETATM 7 C C5 A1BGO . C . F 4 -8.722 4.354 -18.766 0.43 62.25 ? C5 A1BGO 204 B 1 HETATM 8 C C5 A1BGO . D . F 4 -8.722 4.354 -18.766 0.43 62.25 ? C5 A1BGO 204 B 1 HETATM 9 C C6 A1BGO . C . F 4 -9.406 4.176 -16.588 0.43 60.38 ? C6 A1BGO 204 B 1 HETATM 10 C C6 A1BGO . D . F 4 -9.406 4.176 -16.588 0.43 60.38 ? C6 A1BGO 204 B 1 HETATM 11 C C7 A1BGO . C . F 4 -8.304 4.876 -16.114 0.43 64.44 ? C7 A1BGO 204 B 1 HETATM 12 C C7 A1BGO . D . F 4 -8.304 4.876 -16.114 0.43 64.44 ? C7 A1BGO 204 B 1 HETATM 13 C C8 A1BGO . C . F 4 -8.037 5.174 -14.667 0.43 68.05 ? C8 A1BGO 204 B 1 HETATM 14 C C8 A1BGO . D . F 4 -8.037 5.174 -14.667 0.43 68.05 ? C8 A1BGO 204 B 1 HETATM 15 C C10 A1BGO . C . F 4 -8.579 3.338 -11.737 0.43 70.88 ? C10 A1BGO 204 B 1 HETATM 16 C C10 A1BGO . D . F 4 -8.579 3.338 -11.737 0.43 70.88 ? C10 A1BGO 204 B 1 HETATM 17 C C13 A1BGO . C . F 4 -8.586 5.729 -11.562 0.43 74.01 ? C13 A1BGO 204 B 1 HETATM 18 C C13 A1BGO . D . F 4 -8.586 5.729 -11.562 0.43 74.01 ? C13 A1BGO 204 B 1 HETATM 19 C C15 A1BGO . C . F 4 -7.38 5.33 -17.047 0.43 63.69 ? C15 A1BGO 204 B 1 HETATM 20 C C15 A1BGO . D . F 4 -7.38 5.33 -17.047 0.43 63.69 ? C15 A1BGO 204 B 1 HETATM 21 C C1 A1BGO . C . F 4 -4.708 6.688 -21.421 0.43 69.74 ? C1 A1BGO 204 B 1 HETATM 22 C C1 A1BGO . D . F 4 -4.708 6.688 -21.421 0.43 69.74 ? C1 A1BGO 204 B 1 HETATM 23 C C2 A1BGO . C . F 4 -4.587 5.446 -20.595 0.43 69.96 ? C2 A1BGO 204 B 1 HETATM 24 C C2 A1BGO . D . F 4 -4.587 5.446 -20.595 0.43 69.96 ? C2 A1BGO 204 B 1 HETATM 25 C C3 A1BGO . C . F 4 -5.31 5.535 -19.27 0.43 69.68 ? C3 A1BGO 204 B 1 HETATM 26 C C3 A1BGO . D . F 4 -5.31 5.535 -19.27 0.43 69.68 ? C3 A1BGO 204 B 1 HETATM 27 O O1 A1BGO . C . F 4 -4.717 5.632 -18.202 0.43 71.52 ? O1 A1BGO 204 B 1 HETATM 28 O O1 A1BGO . D . F 4 -4.717 5.632 -18.202 0.43 71.52 ? O1 A1BGO 204 B 1 HETATM 29 N N2 A1BGO . C . F 4 -9.626 3.916 -17.882 0.43 60.52 ? N2 A1BGO 204 B 1 HETATM 30 N N2 A1BGO . D . F 4 -9.626 3.916 -17.882 0.43 60.52 ? N2 A1BGO 204 B 1 HETATM 31 O O2 A1BGO . C . F 4 -7.052 5.833 -14.349 0.43 68.95 ? O2 A1BGO 204 B 1 HETATM 32 O O2 A1BGO . D . F 4 -7.052 5.833 -14.349 0.43 68.95 ? O2 A1BGO 204 B 1 HETATM 33 C C9 A1BGO . C . F 4 -8.691 4.577 -12.351 0.43 72.17 ? C9 A1BGO 204 B 1 HETATM 34 C C9 A1BGO . D . F 4 -8.691 4.577 -12.351 0.43 72.17 ? C9 A1BGO 204 B 1 HETATM 35 C C11 A1BGO . C . F 4 -8.372 3.292 -10.384 0.43 71.46 ? C11 A1BGO 204 B 1 HETATM 36 C C11 A1BGO . D . F 4 -8.372 3.292 -10.384 0.43 71.46 ? C11 A1BGO 204 B 1 HETATM 37 N N4 A1BGO . C . F 4 -8.27 4.373 -9.606 0.43 71.16 ? N4 A1BGO 204 B 1 HETATM 38 N N4 A1BGO . D . F 4 -8.27 4.373 -9.606 0.43 71.16 ? N4 A1BGO 204 B 1 HETATM 39 C C12 A1BGO . C . F 4 -8.375 5.573 -10.2 0.43 72.87 ? C12 A1BGO 204 B 1 HETATM 40 C C12 A1BGO . D . F 4 -8.375 5.573 -10.2 0.43 72.87 ? C12 A1BGO 204 B 1 HETATM 41 C C14 A1BGO . C . F 4 -8.701 7.114 -12.153 0.43 74.4 ? C14 A1BGO 204 B 1 HETATM 42 C C14 A1BGO . D . F 4 -8.701 7.114 -12.153 0.43 74.4 ? C14 A1BGO 204 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 42 #