data_7HUD # _model_server_result.job_id i3nnckMkVeT-lSx-HIBdyQ _model_server_result.datetime_utc '2025-01-23 00:13:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7hud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7HUD # _exptl.entry_id 7HUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.65 _cell.angle_gamma 90 _cell.entry_id 7HUD _cell.length_a 112.55 _cell.length_b 52.81 _cell.length_c 44.69 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7HUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -9.786878 0 43.605196 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7HUD _atom_sites.fract_transf_matrix[1][1] 0.008885 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001994 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018936 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022933 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 T9S A 1 401 401 T9S XXX . C 3 DMS A 1 402 501 DMS DMS . D 3 DMS A 1 403 601 DMS DMS . E 4 HOH A 1 501 53 HOH HOH . E 4 HOH A 2 502 70 HOH HOH . E 4 HOH A 3 503 65 HOH HOH . E 4 HOH A 4 504 23 HOH HOH . E 4 HOH A 5 505 62 HOH HOH . E 4 HOH A 6 506 17 HOH HOH . E 4 HOH A 7 507 54 HOH HOH . E 4 HOH A 8 508 13 HOH HOH . E 4 HOH A 9 509 5 HOH HOH . E 4 HOH A 10 510 28 HOH HOH . E 4 HOH A 11 511 66 HOH HOH . E 4 HOH A 12 512 71 HOH HOH . E 4 HOH A 13 513 12 HOH HOH . E 4 HOH A 14 514 68 HOH HOH . E 4 HOH A 15 515 27 HOH HOH . E 4 HOH A 16 516 73 HOH HOH . E 4 HOH A 17 517 3 HOH HOH . E 4 HOH A 18 518 48 HOH HOH . E 4 HOH A 19 519 52 HOH HOH . E 4 HOH A 20 520 34 HOH HOH . E 4 HOH A 21 521 51 HOH HOH . E 4 HOH A 22 522 18 HOH HOH . E 4 HOH A 23 523 60 HOH HOH . E 4 HOH A 24 524 63 HOH HOH . E 4 HOH A 25 525 10 HOH HOH . E 4 HOH A 26 526 49 HOH HOH . E 4 HOH A 27 527 14 HOH HOH . E 4 HOH A 28 528 55 HOH HOH . E 4 HOH A 29 529 6 HOH HOH . E 4 HOH A 30 530 56 HOH HOH . E 4 HOH A 31 531 37 HOH HOH . E 4 HOH A 32 532 4 HOH HOH . E 4 HOH A 33 533 26 HOH HOH . E 4 HOH A 34 534 11 HOH HOH . E 4 HOH A 35 535 41 HOH HOH . E 4 HOH A 36 536 67 HOH HOH . E 4 HOH A 37 537 31 HOH HOH . E 4 HOH A 38 538 39 HOH HOH . E 4 HOH A 39 539 2 HOH HOH . E 4 HOH A 40 540 25 HOH HOH . E 4 HOH A 41 541 20 HOH HOH . E 4 HOH A 42 542 64 HOH HOH . E 4 HOH A 43 543 9 HOH HOH . E 4 HOH A 44 544 8 HOH HOH . E 4 HOH A 45 545 15 HOH HOH . E 4 HOH A 46 546 29 HOH HOH . E 4 HOH A 47 547 32 HOH HOH . E 4 HOH A 48 548 24 HOH HOH . E 4 HOH A 49 549 30 HOH HOH . E 4 HOH A 50 550 21 HOH HOH . E 4 HOH A 51 551 33 HOH HOH . E 4 HOH A 52 552 44 HOH HOH . E 4 HOH A 53 553 22 HOH HOH . E 4 HOH A 54 554 42 HOH HOH . E 4 HOH A 55 555 46 HOH HOH . E 4 HOH A 56 556 43 HOH HOH . E 4 HOH A 57 557 36 HOH HOH . E 4 HOH A 58 558 58 HOH HOH . E 4 HOH A 59 559 16 HOH HOH . E 4 HOH A 60 560 7 HOH HOH . E 4 HOH A 61 561 59 HOH HOH . E 4 HOH A 62 562 61 HOH HOH . E 4 HOH A 63 563 19 HOH HOH . E 4 HOH A 64 564 50 HOH HOH . E 4 HOH A 65 565 45 HOH HOH . E 4 HOH A 66 566 74 HOH HOH . E 4 HOH A 67 567 72 HOH HOH . E 4 HOH A 68 568 40 HOH HOH . E 4 HOH A 69 569 75 HOH HOH . E 4 HOH A 70 570 47 HOH HOH . E 4 HOH A 71 571 69 HOH HOH . E 4 HOH A 72 572 38 HOH HOH . E 4 HOH A 73 573 57 HOH HOH . E 4 HOH A 74 574 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 3 -11.044 -27.613 28.11 1 38.71 ? S DMS 402 A 1 HETATM 2 O O DMS . . . C 3 -12.111 -27.367 29.123 1 45.81 ? O DMS 402 A 1 HETATM 3 C C1 DMS . . . C 3 -11.888 -27.559 26.528 1 41.29 ? C1 DMS 402 A 1 HETATM 4 C C2 DMS . . . C 3 -10.71 -29.364 28.132 1 41.61 ? C2 DMS 402 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #